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The map label for this gene is motY [H]

Identifier: 147674163

GI number: 147674163

Start: 569104

End: 569988

Strand: Direct

Name: motY [H]

Synonym: VC0395_A0529

Alternate gene names: 147674163

Gene position: 569104-569988 (Clockwise)

Preceding gene: 147673131

Following gene: 147673403

Centisome position: 18.82

GC content: 47.91

Gene sequence:

>885_bases
ATGAATAAATGGGTTATCACAAGTTTGTTTGCCATAAGCATGTTATCAGCGTCTGTCGCTTCGGCGTTGGAAGTGCGTTA
TGTGGCAACACCACAACAGTCTACGTGGCAAATGGCAACCAATACTCCGTTGGAATGCCGCCTTGTGCACCCGATCCCCA
ACTATGGTGACGCCGAGTTTTCGTCTCGCGCTGGCAAGAAAATCAATCTCGACTTTGAATTAAAAATGCGTCGCCCAATG
GGGGATACCCGTAATGTCAGCCTAGTCTCTATGCCTCCGGTTTGGCGGCCGGGGGAAGGCGCAGATCGCATCACGAATCT
GCAGTTTTTCAAACAGTTTGATGGTTATATTGGTGGACAGACCGCGTGGTCGTTACTCAGTGAACTGGAAAAGGGGCGCT
ACCCGACCTTCAGTTATCAAGATTGGCAAAGCCGCGATCAACGTATTGAGGTTGCGCTCTCTTCAGTGCTGTTTCAGCAA
CCCTACAATGAGTTTAGTGACTGTATTTCTAAGCTATTGCCTTACAGCTTTGAAGACATCTCGTTTACGATTTTACACTA
CGACCAAGGCACCAGTGTTGAGTTGAATAAAGCGTCACAAAAGCGTTTGGCACAGATCGCTGAATATGTACGCTATAACC
AAGATATTGATTTAGTGCTGGTTTCCACCTATACCGATTCCACGGACACCAATAACAATAGCCAAAATTTGTCGGAACAA
CGGGCTGAGGTACTGCGTGAATACTTTAAATCGATCGGGTTGCCGGAAGATCGTATTCAAGTGCAGGGCTATGGCAAACG
TCGGCCGATCGCCGATAATGCTTCGCCGATTGGTAAAGACAAAAACCGCCGCGTGGTGATTTCACTAGGCCGAACTCAGG
TGTGA

Upstream 100 bases:

>100_bases
CTGTATCGTGCTGGCTAGATTTTTGCATCATCTCCACCAAGTCTCGCAGGCGGCAAATTATCGCCTGAGCATGCAGTATC
AGTAGTGAGAAAAAGTATTT

Downstream 100 bases:

>100_bases
TAGCGAGTCACACCTGAATTGGGAGAGCGCATTGGTTGGGTGATACCGTTAATTGAGGCGAAATTGAGCAATAATCTCGC
ATTTCGAGGCGGTATCTATA

Product: sodium-type flagellar protein MotY

Products: NA

Alternate protein names: Polar flagellum motor protein [H]

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MNKWVITSLFAISMLSASVASALEVRYVATPQQSTWQMATNTPLECRLVHPIPNYGDAEFSSRAGKKINLDFELKMRRPM
GDTRNVSLVSMPPVWRPGEGADRITNLQFFKQFDGYIGGQTAWSLLSELEKGRYPTFSYQDWQSRDQRIEVALSSVLFQQ
PYNEFSDCISKLLPYSFEDISFTILHYDQGTSVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNSQNLSEQ
RAEVLREYFKSIGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISLGRTQV

Sequences:

>Translated_294_residues
MNKWVITSLFAISMLSASVASALEVRYVATPQQSTWQMATNTPLECRLVHPIPNYGDAEFSSRAGKKINLDFELKMRRPM
GDTRNVSLVSMPPVWRPGEGADRITNLQFFKQFDGYIGGQTAWSLLSELEKGRYPTFSYQDWQSRDQRIEVALSSVLFQQ
PYNEFSDCISKLLPYSFEDISFTILHYDQGTSVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNSQNLSEQ
RAEVLREYFKSIGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISLGRTQV
>Mature_294_residues
MNKWVITSLFAISMLSASVASALEVRYVATPQQSTWQMATNTPLECRLVHPIPNYGDAEFSSRAGKKINLDFELKMRRPM
GDTRNVSLVSMPPVWRPGEGADRITNLQFFKQFDGYIGGQTAWSLLSELEKGRYPTFSYQDWQSRDQRIEVALSSVLFQQ
PYNEFSDCISKLLPYSFEDISFTILHYDQGTSVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNSQNLSEQ
RAEVLREYFKSIGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISLGRTQV

Specific function: Plays the role of a stator in the sodium flagellar motor, stabilizing the force-generating unit through direct interaction with the cell wall. Involved in adherence and invasion of fish cell line [H]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001035
- InterPro:   IPR006690
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 33550; Mature: 33550

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKWVITSLFAISMLSASVASALEVRYVATPQQSTWQMATNTPLECRLVHPIPNYGDAEF
CCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEECCCCCCEEEEECCCCCCCCCCH
SSRAGKKINLDFELKMRRPMGDTRNVSLVSMPPVWRPGEGADRITNLQFFKQFDGYIGGQ
HHCCCCEEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHH
TAWSLLSELEKGRYPTFSYQDWQSRDQRIEVALSSVLFQQPYNEFSDCISKLLPYSFEDI
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCE
SFTILHYDQGTSVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNSQNLSEQ
EEEEEEECCCCCEEECHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHH
RAEVLREYFKSIGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISLGRTQV
HHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MNKWVITSLFAISMLSASVASALEVRYVATPQQSTWQMATNTPLECRLVHPIPNYGDAEF
CCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCEEECCCCCCEEEEECCCCCCCCCCH
SSRAGKKINLDFELKMRRPMGDTRNVSLVSMPPVWRPGEGADRITNLQFFKQFDGYIGGQ
HHCCCCEEEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCHH
TAWSLLSELEKGRYPTFSYQDWQSRDQRIEVALSSVLFQQPYNEFSDCISKLLPYSFEDI
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCE
SFTILHYDQGTSVELNKASQKRLAQIAEYVRYNQDIDLVLVSTYTDSTDTNNNSQNLSEQ
EEEEEEECCCCCEEECHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHH
RAEVLREYFKSIGLPEDRIQVQGYGKRRPIADNASPIGKDKNRRVVISLGRTQV
HHHHHHHHHHHCCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA