| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is recX
Identifier: 147674135
GI number: 147674135
Start: 66679
End: 67137
Strand: Direct
Name: recX
Synonym: VC0395_A0071
Alternate gene names: 147674135
Gene position: 66679-67137 (Clockwise)
Preceding gene: 147673530
Following gene: 147675089
Centisome position: 2.2
GC content: 47.93
Gene sequence:
>459_bases ATGAGTTTCGACTTAGCCACTTGCCGACAAAGTGCCTTGCAACTTCTGAGTCGCCGCGATCATAGCGAATATGAGCTACA CCAAAAATTAGCCCTCAAAGGTCATCCTACAGAAGTGATTGATGAGGTTGTGAAGTACGTTTTAGAGCTAGGGTATTTGA GTGATGCCCGTTACGCAGCGAGTCAGGCTCGACAAATCGTTCATAAAGGTTACGGTGAGCAGCGTTTGCGCCAGCAACTC AAAGAAAAGCGGGTCGCGGAAGAGGTGATTGAGCAAGCCCTCGCCGAGCAAACGATAGATTGGTTTGAACTAGCGAAAGA GGTCGCACACAAGAAATTCAAAAGCGGCATCAGCCACGAGCGCTCGCAATACGCCAAACAAGTTCGGTACTTACAGTACC GTGGTTTCAACTTTGAGCAAATACGTTATGCACTTCAAGCCAGTGAGAGTGATGAGTAA
Upstream 100 bases:
>100_bases TCAATCTCGATGTGAATGAAGCCCTGCAATGCAGGGCTTCTTTTTGGCTGCTAATTGAGTGAGTGACTCAAAACTCACCG TTAGCCTAATAGGGAGTTCC
Downstream 100 bases:
>100_bases TCGCTTTCACCCTCTATATTCCTCTTATTAATCCTGCTCTGGATTTTATGCATCTTGGCGGAGCTGCTGCTCGACACACA TTCAGTTTGCTGAAGAGAAG
Product: recombination regulator RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MSFDLATCRQSALQLLSRRDHSEYELHQKLALKGHPTEVIDEVVKYVLELGYLSDARYAASQARQIVHKGYGEQRLRQQL KEKRVAEEVIEQALAEQTIDWFELAKEVAHKKFKSGISHERSQYAKQVRYLQYRGFNFEQIRYALQASESDE
Sequences:
>Translated_152_residues MSFDLATCRQSALQLLSRRDHSEYELHQKLALKGHPTEVIDEVVKYVLELGYLSDARYAASQARQIVHKGYGEQRLRQQL KEKRVAEEVIEQALAEQTIDWFELAKEVAHKKFKSGISHERSQYAKQVRYLQYRGFNFEQIRYALQASESDE >Mature_151_residues SFDLATCRQSALQLLSRRDHSEYELHQKLALKGHPTEVIDEVVKYVLELGYLSDARYAASQARQIVHKGYGEQRLRQQLK EKRVAEEVIEQALAEQTIDWFELAKEVAHKKFKSGISHERSQYAKQVRYLQYRGFNFEQIRYALQASESDE
Specific function: Modulates recA activity
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family
Homologues:
Organism=Escherichia coli, GI1789050, Length=140, Percent_Identity=37.1428571428571, Blast_Score=87, Evalue=6e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RECX_VIBC3 (A5F9B6)
Other databases:
- EMBL: CP000627 - EMBL: CP001235 - ProteinModelPortal: A5F9B6 - SMR: A5F9B6 - STRING: A5F9B6 - GenomeReviews: CP000627_GR - GenomeReviews: CP001235_GR - KEGG: vco:VC0395_A0071 - eggNOG: COG2137 - HOGENOM: HBG638240 - OMA: RYLESFI - ProtClustDB: PRK00117 - BioCyc: VCHO345073:VC0395_A0071-MONOMER - GO: GO:0005737 - HAMAP: MF_01114 - InterPro: IPR003783
Pfam domain/function: PF02631 RecX
EC number: NA
Molecular weight: Translated: 17820; Mature: 17689
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFDLATCRQSALQLLSRRDHSEYELHQKLALKGHPTEVIDEVVKYVLELGYLSDARYAA CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH SQARQIVHKGYGEQRLRQQLKEKRVAEEVIEQALAEQTIDWFELAKEVAHKKFKSGISHE HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH RSQYAKQVRYLQYRGFNFEQIRYALQASESDE HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure SFDLATCRQSALQLLSRRDHSEYELHQKLALKGHPTEVIDEVVKYVLELGYLSDARYAA CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH SQARQIVHKGYGEQRLRQQLKEKRVAEEVIEQALAEQTIDWFELAKEVAHKKFKSGISHE HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH RSQYAKQVRYLQYRGFNFEQIRYALQASESDE HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA