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The map label for this gene is yjjU [H]

Identifier: 147674127

GI number: 147674127

Start: 1715568

End: 1716737

Strand: Reverse

Name: yjjU [H]

Synonym: VC0395_A1595

Alternate gene names: 147674127

Gene position: 1716737-1715568 (Counterclockwise)

Preceding gene: 147675350

Following gene: 147675300

Centisome position: 56.77

GC content: 46.92

Gene sequence:

>1170_bases
GTGGTCCTGCAAATGAAGAGTGGTGGAGTTGTTTCTGATGCAAGGACTGAGCTCGATACTCAGCGTCTAGCCAAATACAT
TGGTGGTAAACATGCACTGGTTGCCCAAGGGGGCGGCCAAAGAGGTATTTTTACGGCTGGTGTACTGGACGCTTTTCTAT
TATCTAATTTTGACCCTTACCATGAGTTTTATGGCACTTCAGCAGGTGCCTTGAATTTGTGCGCCTTTTTATCTCGCCAA
ACCGGGTTAAGTAAAGCCTTTATTTTAGAGCTGACCACTCGCGCAGAGTTTTTCCATCTATTTAGCTACATCCGACGTAA
ACAATATATGAATATGCAGTGGGCGCTGGATCGGATCGGTGAATACCCTTATCGCTTAGATTTGGACATGGCACGTCAGG
CTTTAGGTAAGCGCAAGGCTTATGCGGCAGTCACATCTGCGGATGACTTAAAAGATGCTTATTTTCCTATGTTAGGCGCA
GATTGGCAGCAAGTACTTTTAGCGACCTGTGCGATCCCTGGCCTTTATCCTGAGCCTGTTACGCTTGCGGGTAAGCAATA
TATTGATGGGGGTGTTTCAGCATCAATTCCGGTGCAAGAAGCGTGGCGTAAAGAGGCTCGCTTTATCACGGTGATCCGCA
CTGAATTTATGTCGAAGGAGGAAGAAACGCCATCTCCCTCAGCGACGGAATTACCACTGTGGTTGCGTGAGCCACTGAAC
CATCTTCAACACCAGCTACAGCATAAGTGGTCAGGATGGCGTCAAGAGTGGAATGAATTCCTGCAACAACAAAAGCTGCG
TGCAAAAGAGCAGAAAAAAGAGCAGAAACATCTGGATGCCCTGAATGGTGGGCGCTGGTTATTTGGGGCTGATGATATTT
ATCGGCTCAGTCATTTATTGGGTAGCAAGTTTGATGCGGGGCTGGCGGATTTATTAATGGTCCACTATCAAACCTATACG
CTGACTTCTGAGTTTCTTGACGCACATCATGACGATACATTTATCGCGCAAATTATGCCAAGTGAGCCTTTGCACTCGAA
TTCGTTATTGAGTTCACCAGAGGCGCTGCAATATGACTATGAGCTAGGACTGAAAGCGGGTTACCGCTTTTTAAAAGCGT
ATAGTGAAGCTGAGACTTTCCGCAAGGAACTCCCCCGCAATCTGATGTGA

Upstream 100 bases:

>100_bases
TTCTATGGAACAAGATCTGAAGTTTGCGCTAGCAATTGTTGCGATCACCTTCACTGTGCTGATCGGCTTTGGAGTGATTG
CAATTACACACTAGTCTTGG

Downstream 100 bases:

>100_bases
GGTAAAGAGAAGAAGGCTATGCAGCCTTCTTCTTGCGATGACTAATAGACAGGTAAGATGCGCATACAGTTGGTGGAGCC
TTCGACTCCCATAATATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MVLQMKSGGVVSDARTELDTQRLAKYIGGKHALVAQGGGQRGIFTAGVLDAFLLSNFDPYHEFYGTSAGALNLCAFLSRQ
TGLSKAFILELTTRAEFFHLFSYIRRKQYMNMQWALDRIGEYPYRLDLDMARQALGKRKAYAAVTSADDLKDAYFPMLGA
DWQQVLLATCAIPGLYPEPVTLAGKQYIDGGVSASIPVQEAWRKEARFITVIRTEFMSKEEETPSPSATELPLWLREPLN
HLQHQLQHKWSGWRQEWNEFLQQQKLRAKEQKKEQKHLDALNGGRWLFGADDIYRLSHLLGSKFDAGLADLLMVHYQTYT
LTSEFLDAHHDDTFIAQIMPSEPLHSNSLLSSPEALQYDYELGLKAGYRFLKAYSEAETFRKELPRNLM

Sequences:

>Translated_389_residues
MVLQMKSGGVVSDARTELDTQRLAKYIGGKHALVAQGGGQRGIFTAGVLDAFLLSNFDPYHEFYGTSAGALNLCAFLSRQ
TGLSKAFILELTTRAEFFHLFSYIRRKQYMNMQWALDRIGEYPYRLDLDMARQALGKRKAYAAVTSADDLKDAYFPMLGA
DWQQVLLATCAIPGLYPEPVTLAGKQYIDGGVSASIPVQEAWRKEARFITVIRTEFMSKEEETPSPSATELPLWLREPLN
HLQHQLQHKWSGWRQEWNEFLQQQKLRAKEQKKEQKHLDALNGGRWLFGADDIYRLSHLLGSKFDAGLADLLMVHYQTYT
LTSEFLDAHHDDTFIAQIMPSEPLHSNSLLSSPEALQYDYELGLKAGYRFLKAYSEAETFRKELPRNLM
>Mature_389_residues
MVLQMKSGGVVSDARTELDTQRLAKYIGGKHALVAQGGGQRGIFTAGVLDAFLLSNFDPYHEFYGTSAGALNLCAFLSRQ
TGLSKAFILELTTRAEFFHLFSYIRRKQYMNMQWALDRIGEYPYRLDLDMARQALGKRKAYAAVTSADDLKDAYFPMLGA
DWQQVLLATCAIPGLYPEPVTLAGKQYIDGGVSASIPVQEAWRKEARFITVIRTEFMSKEEETPSPSATELPLWLREPLN
HLQHQLQHKWSGWRQEWNEFLQQQKLRAKEQKKEQKHLDALNGGRWLFGADDIYRLSHLLGSKFDAGLADLLMVHYQTYT
LTSEFLDAHHDDTFIAQIMPSEPLHSNSLLSSPEALQYDYELGLKAGYRFLKAYSEAETFRKELPRNLM

Specific function: Probable lipid hydrolase [H]

COG id: COG4667

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI1790837, Length=333, Percent_Identity=32.7327327327327, Blast_Score=155, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 44333; Mature: 44333

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLQMKSGGVVSDARTELDTQRLAKYIGGKHALVAQGGGQRGIFTAGVLDAFLLSNFDPY
CEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCHH
HEFYGTSAGALNLCAFLSRQTGLSKAFILELTTRAEFFHLFSYIRRKQYMNMQWALDRIG
HHHHCCCCCHHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
EYPYRLDLDMARQALGKRKAYAAVTSADDLKDAYFPMLGADWQQVLLATCAIPGLYPEPV
CCCEEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC
TLAGKQYIDGGVSASIPVQEAWRKEARFITVIRTEFMSKEEETPSPSATELPLWLREPLN
CCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
HLQHQLQHKWSGWRQEWNEFLQQQKLRAKEQKKEQKHLDALNGGRWLFGADDIYRLSHLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHH
GSKFDAGLADLLMVHYQTYTLTSEFLDAHHDDTFIAQIMPSEPLHSNSLLSSPEALQYDY
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHH
ELGLKAGYRFLKAYSEAETFRKELPRNLM
HHCHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVLQMKSGGVVSDARTELDTQRLAKYIGGKHALVAQGGGQRGIFTAGVLDAFLLSNFDPY
CEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCHH
HEFYGTSAGALNLCAFLSRQTGLSKAFILELTTRAEFFHLFSYIRRKQYMNMQWALDRIG
HHHHCCCCCHHHHHHHHHHHCCCCHHHEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
EYPYRLDLDMARQALGKRKAYAAVTSADDLKDAYFPMLGADWQQVLLATCAIPGLYPEPV
CCCEEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC
TLAGKQYIDGGVSASIPVQEAWRKEARFITVIRTEFMSKEEETPSPSATELPLWLREPLN
CCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
HLQHQLQHKWSGWRQEWNEFLQQQKLRAKEQKKEQKHLDALNGGRWLFGADDIYRLSHLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHH
GSKFDAGLADLLMVHYQTYTLTSEFLDAHHDDTFIAQIMPSEPLHSNSLLSSPEALQYDY
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHH
ELGLKAGYRFLKAYSEAETFRKELPRNLM
HHCHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]