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The map label for this gene is nlpB [H]

Identifier: 147674077

GI number: 147674077

Start: 1858473

End: 1859492

Strand: Reverse

Name: nlpB [H]

Synonym: VC0395_A1737

Alternate gene names: 147674077

Gene position: 1859492-1858473 (Counterclockwise)

Preceding gene: 147673601

Following gene: 147675761

Centisome position: 61.49

GC content: 49.31

Gene sequence:

>1020_bases
ATGAAGTTTTCTCGCCAGCTAGTTCTCAGTTCACTGGCTGTTTTGGTTTTAAGTGCTTGCTCCAGCAGCCCCACGCAACG
ACGCCAAGCCAAAGACGATTTCGACTATCTCGAAACCATAGAATTTAAGCCTTGGGTTTTGCCACAAGGTGCCACTCCGC
AGTTTTATCCTAACTATGATATTCCGCAGGGGGCGTTTCATGGTGGCGTGGGCAATGTGGTCGATATTCGCCCGCCACAA
CAAGTGTTGGAACTCATCCCAGGTGCTCGCGCAGAACGTCAAAATGGCGAAGTGACCTTATGGATGTTGCGCCAAGATGA
AGCGCAAAAAGTGTGGGATACCGCACTGAAAATGATTGCGGAGCGCAAAATCCCTCTTCGTAAGCAAACCGATTCTATGG
TGGAAACGGACTGGGTCGATTGGGTATCAGAAGATGAAGATGTGACGATTGGCAGCCGCTACTTAATGTCGATGGTGGAA
ACCAATAATCGTTATGGCTTTAAAATTTCGCTGATTGGTTGGCGTGAAAATGGTCAAGTGCAAACGGTCAGTACCACCAA
TAAAGAGCGTTACAACGCCTTTATGACCAACTTGGTCACCACTCGTTACGACTCCGATGTGCGTGCGGAAGCGGCGCGCC
GTGCTCAAGAGCTGGTTAAGCAAATTCCGATTACCATGGGCTCAGATCGCAGTGGATTCCCTGTGATCATTGCGCGTACG
CCTTACGATGTACTGTGGCAACGTTTGCCAGAGTTACTGCCCAAAATGGGCTTTACTATTGAAGAGCGTAACCAGTCACA
AGGCACGGTCAAAGCCAAATACGCTGCACCAGATGATGAATTCTGGCAACAGGTTGGGGTTAAACCGATTGAGCTTAAAT
CCGGGACTTACACCTTCCTCTTTGGTGACTTGGGTAACCGTACGTCGATTAACGTGACTGACTCAGCGGGTAAACCGGTC
AACGAAGCGCTGTTGAAAGAGATGGTGCCAGTGCTCTCAGCTGTGGTGGATAAGAAGTAA

Upstream 100 bases:

>100_bases
CCCAATCGTTGCCCAAGCCCTGTCTGAAGCCTGTATTTATTAAGGCGCGATCCATTACAATGCCGGGGTATCATGACCCC
GGCAATTTTTAGGAGTTTCA

Downstream 100 bases:

>100_bases
TAAAAAAGAAGGGATGCCAAGGCATCCCTTTGTTTTTGTGGTCACCCCTAAACCACCGCTTTTAGCGGTAGTCATTGTTT
TGCGATTTGTCGTTACCCGT

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MKFSRQLVLSSLAVLVLSACSSSPTQRRQAKDDFDYLETIEFKPWVLPQGATPQFYPNYDIPQGAFHGGVGNVVDIRPPQ
QVLELIPGARAERQNGEVTLWMLRQDEAQKVWDTALKMIAERKIPLRKQTDSMVETDWVDWVSEDEDVTIGSRYLMSMVE
TNNRYGFKISLIGWRENGQVQTVSTTNKERYNAFMTNLVTTRYDSDVRAEAARRAQELVKQIPITMGSDRSGFPVIIART
PYDVLWQRLPELLPKMGFTIEERNQSQGTVKAKYAAPDDEFWQQVGVKPIELKSGTYTFLFGDLGNRTSINVTDSAGKPV
NEALLKEMVPVLSAVVDKK

Sequences:

>Translated_339_residues
MKFSRQLVLSSLAVLVLSACSSSPTQRRQAKDDFDYLETIEFKPWVLPQGATPQFYPNYDIPQGAFHGGVGNVVDIRPPQ
QVLELIPGARAERQNGEVTLWMLRQDEAQKVWDTALKMIAERKIPLRKQTDSMVETDWVDWVSEDEDVTIGSRYLMSMVE
TNNRYGFKISLIGWRENGQVQTVSTTNKERYNAFMTNLVTTRYDSDVRAEAARRAQELVKQIPITMGSDRSGFPVIIART
PYDVLWQRLPELLPKMGFTIEERNQSQGTVKAKYAAPDDEFWQQVGVKPIELKSGTYTFLFGDLGNRTSINVTDSAGKPV
NEALLKEMVPVLSAVVDKK
>Mature_339_residues
MKFSRQLVLSSLAVLVLSACSSSPTQRRQAKDDFDYLETIEFKPWVLPQGATPQFYPNYDIPQGAFHGGVGNVVDIRPPQ
QVLELIPGARAERQNGEVTLWMLRQDEAQKVWDTALKMIAERKIPLRKQTDSMVETDWVDWVSEDEDVTIGSRYLMSMVE
TNNRYGFKISLIGWRENGQVQTVSTTNKERYNAFMTNLVTTRYDSDVRAEAARRAQELVKQIPITMGSDRSGFPVIIART
PYDVLWQRLPELLPKMGFTIEERNQSQGTVKAKYAAPDDEFWQQVGVKPIELKSGTYTFLFGDLGNRTSINVTDSAGKPV
NEALLKEMVPVLSAVVDKK

Specific function: Non-essential lipoprotein [H]

COG id: COG3317

COG function: function code M; Uncharacterized lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082112, Length=329, Percent_Identity=29.1793313069909, Blast_Score=155, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010653
- InterPro:   IPR014524 [H]

Pfam domain/function: PF06804 Lipoprotein_18 [H]

EC number: NA

Molecular weight: Translated: 38404; Mature: 38404

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFSRQLVLSSLAVLVLSACSSSPTQRRQAKDDFDYLETIEFKPWVLPQGATPQFYPNYD
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHCCCCCEECCCCCCCCCCCCCC
IPQGAFHGGVGNVVDIRPPQQVLELIPGARAERQNGEVTLWMLRQDEAQKVWDTALKMIA
CCCCCCCCCCCCEEECCCHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
ERKIPLRKQTDSMVETDWVDWVSEDEDVTIGSRYLMSMVETNNRYGFKISLIGWRENGQV
HCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCEEEEEEEEECCCCCE
QTVSTTNKERYNAFMTNLVTTRYDSDVRAEAARRAQELVKQIPITMGSDRSGFPVIIART
EEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEECC
PYDVLWQRLPELLPKMGFTIEERNQSQGTVKAKYAAPDDEFWQQVGVKPIELKSGTYTFL
CHHHHHHHHHHHHHHHCCEEECCCCCCCCEEEEECCCCHHHHHHHCCCEEEECCCEEEEE
FGDLGNRTSINVTDSAGKPVNEALLKEMVPVLSAVVDKK
EECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKFSRQLVLSSLAVLVLSACSSSPTQRRQAKDDFDYLETIEFKPWVLPQGATPQFYPNYD
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHCCCCCEECCCCCCCCCCCCCC
IPQGAFHGGVGNVVDIRPPQQVLELIPGARAERQNGEVTLWMLRQDEAQKVWDTALKMIA
CCCCCCCCCCCCEEECCCHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
ERKIPLRKQTDSMVETDWVDWVSEDEDVTIGSRYLMSMVETNNRYGFKISLIGWRENGQV
HCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCCCCEEEEEEEEECCCCCE
QTVSTTNKERYNAFMTNLVTTRYDSDVRAEAARRAQELVKQIPITMGSDRSGFPVIIART
EEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEEECC
PYDVLWQRLPELLPKMGFTIEERNQSQGTVKAKYAAPDDEFWQQVGVKPIELKSGTYTFL
CHHHHHHHHHHHHHHHCCEEECCCCCCCCEEEEECCCCHHHHHHHCCCEEEECCCEEEEE
FGDLGNRTSINVTDSAGKPVNEALLKEMVPVLSAVVDKK
EECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1885529; 2120198; 9205837; 9278503 [H]