Definition Vibrio cholerae O395 chromosome 2, complete sequence.
Accession NC_009457
Length 3,024,069

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The map label for this gene is 147673967

Identifier: 147673967

GI number: 147673967

Start: 1090974

End: 1091648

Strand: Reverse

Name: 147673967

Synonym: VC0395_A1046

Alternate gene names: NA

Gene position: 1091648-1090974 (Counterclockwise)

Preceding gene: 147673519

Following gene: 147674177

Centisome position: 36.1

GC content: 49.48

Gene sequence:

>675_bases
GTGAGTCCTGATTATTTGGGGGCTTGGGTGGTAGGCCTGCTGGGAGCGGGTCACTGTTTGGGCATGTGCGGCGGCATTAG
CGCTTTGCTCACCCTTGATCCGTCTAAAAGCTCACCAGCACTGCTACTTTATTACAATCTAGGTCGCCTGCTGAGCTACG
CCTTAATTGGCGGTATTGTCGGTGGCATCACCGCTTCACTGACAGAGCTCATTGATGTTCAATCCGCCTTAGTGTGGCTT
CGAATTTTCGCAGCTGTGTTGATGATTGTATTAGGCCTTTACATCGGACGCTGGTGGTTTGGACTACTGTGGCTTGAAAA
AGTCGGCCTGAAAATCTGGCCATGGATTTCACCGCTAGGCAAAACTCTTTTGCCGCTAAAAAAACAGTGGCATGCACTAC
CCTTCGGCCTTGTGTGGGGCTGGCTTCCTTGTGGTTTAGTCTACTCTATGTTGACTTGGTCTGCCGTGGCAGGCAGTTTC
TCACAAGGGGCACTTATTATGTTGTCATTTGGGTTTGGCACCCTACCCGCCATGCTAGCCAGTGGCTGGGGAGCTAATAA
ATTAATGCATTGGCAAAATTCGCATTTATTTCGTCAATGTGCGGCAATACTGGTGATTGGGTATGGGCTATTCACTGCCT
ACGATGCCGTAAAGCTGATGATTAATCTGGGTTAA

Upstream 100 bases:

>100_bases
TTTTTTTGTGGGCAGTCAAAAGTGAGCAATTTGAAGATCTTGAGCGCCAAGGCCACAACATCTTATTTGAAGATGAAGAG
AGCCAAGATAAGGATAAACG

Downstream 100 bases:

>100_bases
TGGTTTAGAGGTCGCTGATGTATTTTAACTACCCTTTAGGGTTAAGCGATGCTAAAATATTGACGTACATCAATTAGTGA
AAGGTTGTTATGATTTCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MSPDYLGAWVVGLLGAGHCLGMCGGISALLTLDPSKSSPALLLYYNLGRLLSYALIGGIVGGITASLTELIDVQSALVWL
RIFAAVLMIVLGLYIGRWWFGLLWLEKVGLKIWPWISPLGKTLLPLKKQWHALPFGLVWGWLPCGLVYSMLTWSAVAGSF
SQGALIMLSFGFGTLPAMLASGWGANKLMHWQNSHLFRQCAAILVIGYGLFTAYDAVKLMINLG

Sequences:

>Translated_224_residues
MSPDYLGAWVVGLLGAGHCLGMCGGISALLTLDPSKSSPALLLYYNLGRLLSYALIGGIVGGITASLTELIDVQSALVWL
RIFAAVLMIVLGLYIGRWWFGLLWLEKVGLKIWPWISPLGKTLLPLKKQWHALPFGLVWGWLPCGLVYSMLTWSAVAGSF
SQGALIMLSFGFGTLPAMLASGWGANKLMHWQNSHLFRQCAAILVIGYGLFTAYDAVKLMINLG
>Mature_223_residues
SPDYLGAWVVGLLGAGHCLGMCGGISALLTLDPSKSSPALLLYYNLGRLLSYALIGGIVGGITASLTELIDVQSALVWLR
IFAAVLMIVLGLYIGRWWFGLLWLEKVGLKIWPWISPLGKTLLPLKKQWHALPFGLVWGWLPCGLVYSMLTWSAVAGSFS
QGALIMLSFGFGTLPAMLASGWGANKLMHWQNSHLFRQCAAILVIGYGLFTAYDAVKLMINLG

Specific function: Unknown

COG id: COG2836

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24301; Mature: 24170

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPDYLGAWVVGLLGAGHCLGMCGGISALLTLDPSKSSPALLLYYNLGRLLSYALIGGIV
CCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHH
GGITASLTELIDVQSALVWLRIFAAVLMIVLGLYIGRWWFGLLWLEKVGLKIWPWISPLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHH
KTLLPLKKQWHALPFGLVWGWLPCGLVYSMLTWSAVAGSFSQGALIMLSFGFGTLPAMLA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHH
SGWGANKLMHWQNSHLFRQCAAILVIGYGLFTAYDAVKLMINLG
CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SPDYLGAWVVGLLGAGHCLGMCGGISALLTLDPSKSSPALLLYYNLGRLLSYALIGGIV
CCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHH
GGITASLTELIDVQSALVWLRIFAAVLMIVLGLYIGRWWFGLLWLEKVGLKIWPWISPLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHH
KTLLPLKKQWHALPFGLVWGWLPCGLVYSMLTWSAVAGSFSQGALIMLSFGFGTLPAMLA
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHH
SGWGANKLMHWQNSHLFRQCAAILVIGYGLFTAYDAVKLMINLG
CCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA