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The map label for this gene is mcpC [H]

Identifier: 147673902

GI number: 147673902

Start: 1861832

End: 1863703

Strand: Reverse

Name: mcpC [H]

Synonym: VC0395_A1741

Alternate gene names: 147673902

Gene position: 1863703-1861832 (Counterclockwise)

Preceding gene: 147673150

Following gene: 147673601

Centisome position: 61.63

GC content: 48.45

Gene sequence:

>1872_bases
ATGAGGTTTAGTCAGAAGATCGTTGCCGCTTCATCGGCATTACTACTCTGTGTTATTGCACTGCTGTCATTCCAACAGCT
CTCCACCGTTCGTGAGGAGATTGAGTCACTCGTTCAAGATAGCTTGATGGAGATGGTGAAAGGGGTCAAAAACACAATTG
AGTCAGATCTTGCCAGTAAAAAGGGATTAGCGCAGTCGACCACTGAGATTTTACAGCTTGATCCAACCAACAAAGCATTT
GCTAAGAGTGTTTTAGAATCCCCCAACCTAAAAGGGAGCTTTTTAGCGATTGGTCTTGGCTATGAATCTGATGCGACCGT
GGTCGAAAATGATGATGGTTGGGAGCCAAACGCAGATTACGACCCACGTAAGCGTCCTTGGTATGTGGATGCTAAGCGTG
AAAGAAAGCTAGTGGTCACCGAGCCTTATGTCGATATCTCGACCAAGAAAATCATCATCTCTATCGGTACGCCAGTTTAT
CAGCAGAGTAACTTTGTTGGTGCCATGTTCTATGACGTAGAGCTGACTCAGTTGGCGCAATTGGTTAACTCTGTGAATCT
GTTTGATGCGGGTTACTTATTCATCACGACGAAAGACGGCGTTACCATTGCTCACCCGAATGCGGAAAACAATGGCGAAA
AATTCAGTCAGTTTTTACCGAATGTCGATCTGAAAGAAGGAACCCAACGGATTGAGCTGGACGGTAAATACTATCTGGTT
AAATTTGCCCAAGTGCCATCTGAGAGTTGGTATATCGGCGCTGTGGTGGATGAATCGATCGCGTTTGCGATGGTGGATGA
TTTACGCCACAGCTCATTGATTTATACCGTTATTGGCGTATTGCTCAGTATCATTGGCTTAAGCTTCCTAATCAAAGTGC
TGATGAAGCCTCTGGGTGCGCTGAGTCGAGCCATTGAAGATGTAGCTTCAGGTCAAGGGGATTTAACTAAACGTTTGGAC
ACCAACACCGATATGGAATTTGCAATATTGGCGAAGGATTTCAACGTGTTCTGCGAAACGTTGCAAAAACGTATCCAACA
CCTAAAAGGGATTGGCGCGGAAATCATGCATGGTACCGAGCAAACGGTACTGGGTGCGCATGAGTCGGCCAGTGCCATGG
CGCAGCAGTTGCAAGAGCTGGAGCAGCTCGCGACGGCAATGCATGAGATGGCGGTAACGGCGACAGAAGTAGCGAATAAC
GCGCAAGGAGCAGCGGCTGCGGCTCACGAGGCTGATGAAGCTTCACAAGATGGCAGTAAAGTGGTGAGTGATACCACGCG
ATCGATTGATGCGCTTTCTGCTCGTATCGAACAAGCGGTAGAAGAGGTCAAAGGACTAGAAGTGGCGACCGGAAATATCG
AAACCATTTTGAAAGTTATTAACGATATTGCTGATCAAACCAACTTGCTGGCACTTAATGCGGCGATTGAAGCCGCGCGC
GCGGGGGAATCGGGTCGAGGTTTTGCGGTGGTTGCCGATGAAGTTCGGACGTTGGCACAGCGTACGCAACAATCGACCAC
GGAAATTCGCAATATGATCGAACAGTTGCAAAGCGGTGCGAGTGCGGTTTCTGCTGCGATGAATGAGAGTAAGTACACGG
CGGATGATGCTGTGCAGAAGGCGCAGCTTGCTAATGAATCTCTGCAACGGATTCGTGGTGCTATCCAACGGATCAGCGAT
ATGAACATGCAGATTGCTTCTGCAGCGGAAGAGCAAAGTCTCGTTGCCGAGGAGATCAACACCAATACGGTGAAGATTAA
AGACCTCTCGACTCAGGTGGCGGACTCCGCTAAATCAGCGAGTATGGCCATGGAAGTACAAACCGAAAACGTGCGCGAGC
AAGGCAAACTCCTCAACACCTTTATCGTGTAG

Upstream 100 bases:

>100_bases
AGAGAGTTGGCGATATAGCTCCTATAACAAAACCAATTTAATCAACACTATTTATCGCAAATGGGCAAATCAGGGACCCA
GAACAGAAGGATCGGACATT

Downstream 100 bases:

>100_bases
CGTTTTGACCTACGCATTTCGAATGCCAACAATAAGGCCAGTCAATGACTGGCCTTAATCTTTTCTGTATTTAAACGGAC
TAAAATCGGCATTTCTACCG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 623; Mature: 623

Protein sequence:

>623_residues
MRFSQKIVAASSALLLCVIALLSFQQLSTVREEIESLVQDSLMEMVKGVKNTIESDLASKKGLAQSTTEILQLDPTNKAF
AKSVLESPNLKGSFLAIGLGYESDATVVENDDGWEPNADYDPRKRPWYVDAKRERKLVVTEPYVDISTKKIIISIGTPVY
QQSNFVGAMFYDVELTQLAQLVNSVNLFDAGYLFITTKDGVTIAHPNAENNGEKFSQFLPNVDLKEGTQRIELDGKYYLV
KFAQVPSESWYIGAVVDESIAFAMVDDLRHSSLIYTVIGVLLSIIGLSFLIKVLMKPLGALSRAIEDVASGQGDLTKRLD
TNTDMEFAILAKDFNVFCETLQKRIQHLKGIGAEIMHGTEQTVLGAHESASAMAQQLQELEQLATAMHEMAVTATEVANN
AQGAAAAAHEADEASQDGSKVVSDTTRSIDALSARIEQAVEEVKGLEVATGNIETILKVINDIADQTNLLALNAAIEAAR
AGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEQLQSGASAVSAAMNESKYTADDAVQKAQLANESLQRIRGAIQRISD
MNMQIASAAEEQSLVAEEINTNTVKIKDLSTQVADSAKSASMAMEVQTENVREQGKLLNTFIV

Sequences:

>Translated_623_residues
MRFSQKIVAASSALLLCVIALLSFQQLSTVREEIESLVQDSLMEMVKGVKNTIESDLASKKGLAQSTTEILQLDPTNKAF
AKSVLESPNLKGSFLAIGLGYESDATVVENDDGWEPNADYDPRKRPWYVDAKRERKLVVTEPYVDISTKKIIISIGTPVY
QQSNFVGAMFYDVELTQLAQLVNSVNLFDAGYLFITTKDGVTIAHPNAENNGEKFSQFLPNVDLKEGTQRIELDGKYYLV
KFAQVPSESWYIGAVVDESIAFAMVDDLRHSSLIYTVIGVLLSIIGLSFLIKVLMKPLGALSRAIEDVASGQGDLTKRLD
TNTDMEFAILAKDFNVFCETLQKRIQHLKGIGAEIMHGTEQTVLGAHESASAMAQQLQELEQLATAMHEMAVTATEVANN
AQGAAAAAHEADEASQDGSKVVSDTTRSIDALSARIEQAVEEVKGLEVATGNIETILKVINDIADQTNLLALNAAIEAAR
AGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEQLQSGASAVSAAMNESKYTADDAVQKAQLANESLQRIRGAIQRISD
MNMQIASAAEEQSLVAEEINTNTVKIKDLSTQVADSAKSASMAMEVQTENVREQGKLLNTFIV
>Mature_623_residues
MRFSQKIVAASSALLLCVIALLSFQQLSTVREEIESLVQDSLMEMVKGVKNTIESDLASKKGLAQSTTEILQLDPTNKAF
AKSVLESPNLKGSFLAIGLGYESDATVVENDDGWEPNADYDPRKRPWYVDAKRERKLVVTEPYVDISTKKIIISIGTPVY
QQSNFVGAMFYDVELTQLAQLVNSVNLFDAGYLFITTKDGVTIAHPNAENNGEKFSQFLPNVDLKEGTQRIELDGKYYLV
KFAQVPSESWYIGAVVDESIAFAMVDDLRHSSLIYTVIGVLLSIIGLSFLIKVLMKPLGALSRAIEDVASGQGDLTKRLD
TNTDMEFAILAKDFNVFCETLQKRIQHLKGIGAEIMHGTEQTVLGAHESASAMAQQLQELEQLATAMHEMAVTATEVANN
AQGAAAAAHEADEASQDGSKVVSDTTRSIDALSARIEQAVEEVKGLEVATGNIETILKVINDIADQTNLLALNAAIEAAR
AGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEQLQSGASAVSAAMNESKYTADDAVQKAQLANESLQRIRGAIQRISD
MNMQIASAAEEQSLVAEEINTNTVKIKDLSTQVADSAKSASMAMEVQTENVREQGKLLNTFIV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=309, Percent_Identity=32.3624595469256, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI1787690, Length=340, Percent_Identity=30, Blast_Score=128, Evalue=9e-31,
Organism=Escherichia coli, GI1788195, Length=282, Percent_Identity=32.6241134751773, Blast_Score=126, Evalue=3e-30,
Organism=Escherichia coli, GI1788194, Length=341, Percent_Identity=29.6187683284457, Blast_Score=113, Evalue=4e-26,
Organism=Escherichia coli, GI1789453, Length=358, Percent_Identity=27.9329608938547, Blast_Score=97, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 67687; Mature: 67687

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFSQKIVAASSALLLCVIALLSFQQLSTVREEIESLVQDSLMEMVKGVKNTIESDLASK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGLAQSTTEILQLDPTNKAFAKSVLESPNLKGSFLAIGLGYESDATVVENDDGWEPNADY
CCCHHHHHHHEEECCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCC
DPRKRPWYVDAKRERKLVVTEPYVDISTKKIIISIGTPVYQQSNFVGAMFYDVELTQLAQ
CCCCCCEEECCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEEHHHHHHHHH
LVNSVNLFDAGYLFITTKDGVTIAHPNAENNGEKFSQFLPNVDLKEGTQRIELDGKYYLV
HHHHCCEEECCEEEEEECCCEEEECCCCCCCHHHHHHHCCCCCHHCCCCEEEECCCEEEE
KFAQVPSESWYIGAVVDESIAFAMVDDLRHSSLIYTVIGVLLSIIGLSFLIKVLMKPLGA
EEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSRAIEDVASGQGDLTKRLDTNTDMEFAILAKDFNVFCETLQKRIQHLKGIGAEIMHGTE
HHHHHHHHHCCCCCHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHCCCH
QTVLGAHESASAMAQQLQELEQLATAMHEMAVTATEVANNAQGAAAAAHEADEASQDGSK
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHH
VVSDTTRSIDALSARIEQAVEEVKGLEVATGNIETILKVINDIADQTNLLALNAAIEAAR
HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCEEEHHHHHHHHH
AGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEQLQSGASAVSAAMNESKYTADDAVQK
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AQLANESLQRIRGAIQRISDMNMQIASAAEEQSLVAEEINTNTVKIKDLSTQVADSAKSA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHH
SMAMEVQTENVREQGKLLNTFIV
HHEEEEEHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRFSQKIVAASSALLLCVIALLSFQQLSTVREEIESLVQDSLMEMVKGVKNTIESDLASK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGLAQSTTEILQLDPTNKAFAKSVLESPNLKGSFLAIGLGYESDATVVENDDGWEPNADY
CCCHHHHHHHEEECCCCHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEECCCCCCCCCCC
DPRKRPWYVDAKRERKLVVTEPYVDISTKKIIISIGTPVYQQSNFVGAMFYDVELTQLAQ
CCCCCCEEECCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEEHHHHHHHHH
LVNSVNLFDAGYLFITTKDGVTIAHPNAENNGEKFSQFLPNVDLKEGTQRIELDGKYYLV
HHHHCCEEECCEEEEEECCCEEEECCCCCCCHHHHHHHCCCCCHHCCCCEEEECCCEEEE
KFAQVPSESWYIGAVVDESIAFAMVDDLRHSSLIYTVIGVLLSIIGLSFLIKVLMKPLGA
EEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSRAIEDVASGQGDLTKRLDTNTDMEFAILAKDFNVFCETLQKRIQHLKGIGAEIMHGTE
HHHHHHHHHCCCCCHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHCCCH
QTVLGAHESASAMAQQLQELEQLATAMHEMAVTATEVANNAQGAAAAAHEADEASQDGSK
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHH
VVSDTTRSIDALSARIEQAVEEVKGLEVATGNIETILKVINDIADQTNLLALNAAIEAAR
HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCEEEHHHHHHHHH
AGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEQLQSGASAVSAAMNESKYTADDAVQK
CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AQLANESLQRIRGAIQRISDMNMQIASAAEEQSLVAEEINTNTVKIKDLSTQVADSAKSA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHH
SMAMEVQTENVREQGKLLNTFIV
HHEEEEEHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353924; 9384377 [H]