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The map label for this gene is ygfB [C]

Identifier: 147673888

GI number: 147673888

Start: 2210246

End: 2210821

Strand: Reverse

Name: ygfB [C]

Synonym: VC0395_A2053

Alternate gene names: 147673888

Gene position: 2210821-2210246 (Counterclockwise)

Preceding gene: 147674009

Following gene: 147673178

Centisome position: 73.11

GC content: 48.26

Gene sequence:

>576_bases
ATGAGCAAAAATAGACTTCCTGCTTACCCAGCTTTAGCCAATGAGCTGCGTAGCGCTTCTCTCGGTATTAATCCTGCCGA
GCTACAAGGGTTACTGACGGGGATGTTGTCCGGCGGTTTAAGCCTCAATGATAAAAGCTGGCAAGCCTTGGTTTTCGATT
ACACCAACGATGGCATGGGCTGGCCAATTGGTGCATTAGCCAGCGCAGAGCAGATTCTGCTGGCGATGAGTGCGCAGTTG
GTGGATACCGATTTTGAGCTTTCATTACTCCTACCTGAAGGCGAGGGCGAGGAAGCCTTGTTTGAGCTCGCGGATGCGGT
TGCGGAATGGATTAACCACTTTATTTCTGGATTAGGTTTGAGTGGCGCCAATCTGAAGCACGCCTCTGTTGAAGCGAAAG
AAGCATTAGAGGATCTGGAAGAGATGTCGAAATTAGGCATCGATGAAGAGGATGACTTAGCCGAGCAAGCAGAATTATTG
GAACAAGTGATCGAACATATCAAAGCCTGTGTATTGGTATTACATGCGGAATTTGGTGTCAAACCAGAGCAAGACACTAA
GCCCACCGTTCACTAA

Upstream 100 bases:

>100_bases
ACAATTTGTGCAAAAGCTAAGCACCAACTGCAGGCGAGCGTTTTCGCTCTGGCAATGAAGTGGTAGGATTGGGCTACCTT
TCTCGGTTAGTGAATCCAAT

Downstream 100 bases:

>100_bases
GTCAACAGAAAGGAAGCGCAATGACGGACAGCCAGCAGCCCAATATCAGTAAGCCTATCAGTTTTGATGTGATCATTGCG
GGGGGGGCAATGGCGGGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MSKNRLPAYPALANELRSASLGINPAELQGLLTGMLSGGLSLNDKSWQALVFDYTNDGMGWPIGALASAEQILLAMSAQL
VDTDFELSLLLPEGEGEEALFELADAVAEWINHFISGLGLSGANLKHASVEAKEALEDLEEMSKLGIDEEDDLAEQAELL
EQVIEHIKACVLVLHAEFGVKPEQDTKPTVH

Sequences:

>Translated_191_residues
MSKNRLPAYPALANELRSASLGINPAELQGLLTGMLSGGLSLNDKSWQALVFDYTNDGMGWPIGALASAEQILLAMSAQL
VDTDFELSLLLPEGEGEEALFELADAVAEWINHFISGLGLSGANLKHASVEAKEALEDLEEMSKLGIDEEDDLAEQAELL
EQVIEHIKACVLVLHAEFGVKPEQDTKPTVH
>Mature_190_residues
SKNRLPAYPALANELRSASLGINPAELQGLLTGMLSGGLSLNDKSWQALVFDYTNDGMGWPIGALASAEQILLAMSAQLV
DTDFELSLLLPEGEGEEALFELADAVAEWINHFISGLGLSGANLKHASVEAKEALEDLEEMSKLGIDEEDDLAEQAELLE
QVIEHIKACVLVLHAEFGVKPEQDTKPTVH

Specific function: Unknown

COG id: COG3079

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0149 family

Homologues:

Organism=Escherichia coli, GI87082182, Length=193, Percent_Identity=35.7512953367876, Blast_Score=111, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2399_VIBCM (C3LR19)

Other databases:

- EMBL:   CP001233
- RefSeq:   YP_002811148.1
- ProteinModelPortal:   C3LR19
- SMR:   C3LR19
- GeneID:   7773658
- GenomeReviews:   CP001233_GR
- KEGG:   vcm:VCM66_2399
- OMA:   ELMNDGQ
- ProtClustDB:   PRK01736
- HAMAP:   MF_00346
- InterPro:   IPR011978
- TIGRFAMs:   TIGR02292

Pfam domain/function: PF03695 UPF0149; SSF101327 YgfB_YecA

EC number: NA

Molecular weight: Translated: 20579; Mature: 20448

Theoretical pI: Translated: 3.95; Mature: 3.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNRLPAYPALANELRSASLGINPAELQGLLTGMLSGGLSLNDKSWQALVFDYTNDGMG
CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCC
WPIGALASAEQILLAMSAQLVDTDFELSLLLPEGEGEEALFELADAVAEWINHFISGLGL
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC
SGANLKHASVEAKEALEDLEEMSKLGIDEEDDLAEQAELLEQVIEHIKACVLVLHAEFGV
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KPEQDTKPTVH
CCCCCCCCCCC
>Mature Secondary Structure 
SKNRLPAYPALANELRSASLGINPAELQGLLTGMLSGGLSLNDKSWQALVFDYTNDGMG
CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCC
WPIGALASAEQILLAMSAQLVDTDFELSLLLPEGEGEEALFELADAVAEWINHFISGLGL
CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC
SGANLKHASVEAKEALEDLEEMSKLGIDEEDDLAEQAELLEQVIEHIKACVLVLHAEFGV
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KPEQDTKPTVH
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA