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The map label for this gene is tcpH [H]

Identifier: 147673777

GI number: 147673777

Start: 380231

End: 380641

Strand: Direct

Name: tcpH [H]

Synonym: VC0395_A0352

Alternate gene names: 147673777

Gene position: 380231-380641 (Clockwise)

Preceding gene: 147673583

Following gene: 147673187

Centisome position: 12.57

GC content: 41.85

Gene sequence:

>411_bases
ATGCACAAAAAATTAAAAGCTTGGGGGGGGGCTGCAGGTCTATTCGTTGTAGCACTAGGAGTAACGCTCATCGCACTCCC
GATGCGACAAAAAAACTCGCACGGCACAATGATTATTGATGGTACAGTCACACAAATTTTTTCTACTTATCAAGGTAATC
TATCCAATGTTTGGCTTACCCAGACAGATCCACAAGGTAACGTAGTCAAAAGTTGGACTACACGTTATCAAACATTGCCA
GATCCTAGCTCTCAGAAGCTAAATTTGATTCCCGACTACTCAGAAAGTAATGTGAGCCGTGATTACAATGTGTTGAGTAT
TTATCAACTCGGCAAAGGTTGTTTTCTCGCCTTCCCTTACAAGCAGCTTACGGCTGAAAAAATGTGGTTTTCCTGTCAAA
GCGATTTTTAG

Upstream 100 bases:

>100_bases
GGTTACCGGGGATAACAATCCAAAAACTGTCAGAACAAAAACTCATGTTCGCTATTGATCAACATCAGTGTTCCGTGAAT
TATGAACAGAAGACATTAGA

Downstream 100 bases:

>100_bases
GGTCTTATCATGAGCCGCCTAGATAGTGTGTGACGAGTAGGCGCTCCTCCACAGTCAAAGTGACTGAAAGTCATCTCTTC
ATCTTTACCCTAATGTTCGC

Product: toxin co-regulated pilus biosynthesis protein H

Products: NA

Alternate protein names: TCP pilus biosynthesis protein tcpH [H]

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MHKKLKAWGGAAGLFVVALGVTLIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLTQTDPQGNVVKSWTTRYQTLP
DPSSQKLNLIPDYSESNVSRDYNVLSIYQLGKGCFLAFPYKQLTAEKMWFSCQSDF

Sequences:

>Translated_136_residues
MHKKLKAWGGAAGLFVVALGVTLIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLTQTDPQGNVVKSWTTRYQTLP
DPSSQKLNLIPDYSESNVSRDYNVLSIYQLGKGCFLAFPYKQLTAEKMWFSCQSDF
>Mature_136_residues
MHKKLKAWGGAAGLFVVALGVTLIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLTQTDPQGNVVKSWTTRYQTLP
DPSSQKLNLIPDYSESNVSRDYNVLSIYQLGKGCFLAFPYKQLTAEKMWFSCQSDF

Specific function: Involved in TCP pilus biogenesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15245; Mature: 15245

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKKLKAWGGAAGLFVVALGVTLIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHCCCCCEEEEE
QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSESNVSRDYNVLSIYQLGKGCFLAFPY
ECCCCCCEEEHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCEEEEECH
KQLTAEKMWFSCQSDF
HHHHHHHHHEEECCCC
>Mature Secondary Structure
MHKKLKAWGGAAGLFVVALGVTLIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLT
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHCCCCCEEEEE
QTDPQGNVVKSWTTRYQTLPDPSSQKLNLIPDYSESNVSRDYNVLSIYQLGKGCFLAFPY
ECCCCCCEEEHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEECCCCEEEEECH
KQLTAEKMWFSCQSDF
HHHHHHHHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8621096; 10952301 [H]