| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673746
Identifier: 147673746
GI number: 147673746
Start: 714033
End: 715784
Strand: Direct
Name: 147673746
Synonym: VC0395_A0691
Alternate gene names: NA
Gene position: 714033-715784 (Clockwise)
Preceding gene: 147675038
Following gene: 147673122
Centisome position: 23.61
GC content: 51.77
Gene sequence:
>1752_bases ATGGCCCAGCAACTTAAAACAGACATCATCCTCAACCTAGCGGGTAATCTCGCGGCCAAAGCCAAGCAATATGGCGCATC AATGAGCGACTTCGCACGCAAGAATGAGCGTGCCATGACTCTACTCAAAACCTCAGCAGATGCCGCAGGTCGCGGCATTG ACTCACTCGGTAACCGCTATGTTGGCCTTGTTACTGCTGTTGCGACAGGCGCGGCCGTGCGTAATGTGGCGGCGCTCGAA GCGCAAATGGTGCGCATTGGTACTAACGCCAAGCTCTCTAGTGATCAAGTCGCCCTGCTCACCAAGCAGCTTGAAGCGAT GTCAGTGCAAAAGGATATCCGCATTGGTACTGACCAGTTGGCCGCAGGCGTGGATGAGCTGCTGGGGAAAACGGGTGACT TTGAATTCGTGCAAGAGAACCTTGAGAACATGGGTTTGTTCATGCAAGCCTTCGGGGCAGATGCGCGTTCAACAGGTGCG CTGTTTGCCCAGTTCCGTGAGAAAGGGATCCGAGATGCCAAAGACGTGATGAACACCATCGATGAGCTGTATGGTCAGTT CGCGATCGGTAGTGTCAACGTCAAAGACTTGGCTGATATTTCCGAGCAGCTCTTTGCTACTTACCAAGGCAAAGGGCCAG AAGCGATCTCTCAGATGTCTGCGCTCGTTCAGCTCTTTGCTAAGGCTAAAGGCAATGCAAACGAATCGTTGACCTCAATT CAGGCCGTGTTCGCCACGTTCAGCGATAAAAAGAAAGTGGAGTTCCTGAACCGTCAGGGCATCGAAGTATTCAAAAAAGG CACCAAAGAGCTGCGCGAGCCTGTCGAACTGCTCTTAGAGATTTTGGATAAGGCCAAGAATGACCCATTGAAATTGGGTG ATGTGTTTGACCAAACCAGCTTGCAAGGTTTGGCCTCTCTCTACTCTCAAGAGAATAAAGATTTGCTGCGATCCATGATT AGCGGCACCGCAGAAATGGGGGCGACACAGGAAGCCGCCGCCAAGAACGCTGCGACCCTGAATGCAGCCACCACCGCATT GAATAACAGCTTCAATAAATTTGCCAACGAACGCTTGGCCGAGCCGATTCAAGAACTCGCGGACGCGATCAACTCAGTTG ATGATGAAACCATTCAGAACTGGCTCAAGTGGGCAGAAGCAGCTGGCTATGGTGTGGGTTTGTTGTTAGCAGGTAAGAAA GCTGTAGATGCTTATCGATGGGTAAAAGGTGGTTCCGGCGGTTCAGGCGGTGCAGCAGGTGGCGGTTTCGCCGATTTAGG TGTAATGCCCGTGTACGTGGTGAACATGCCAGGTGGTGGCATGGGTGGAGCTGCTGGCGGATTACCAGAAGGTATCGGCG GAGATGGTAAGCCAACAGGTAAGCCAAGTGCCAAGTCAAAGTGGCCGTCTATTTTTTCAAAGCAGAATCTCGCGGCCATC GGCACGATTGGTTATGCCAGCACCATGATCCCAGAGTGGTCTCCTATCGATGTTCGCCGTGCATCAGAAGTGGATCGCAC AGGCTTGCCGGAAAGCTTTGTTCCTGCACCTGGATTGCTCGACGTGTGGGATGAACTCAAAGGCCTATTCTCTGGCTCAA GTAATGGTTCAATGGCTGGCAATAGTTACATGGCAGGCCAAACGGGTGGCGAGATGAAATTAAAAGTGGAAGTGTCTGAT GACCGTGTAAAAGTCACGCCTACTTACCTGCCGAAAGGTTTCACTATTGACCCAGATATGGGCGCAAATTAA
Upstream 100 bases:
>100_bases TTGCAGCTTGCCCTAAGTAGCCGCTTCCCCATCAGTGTGACACAAGCAATGCCACTTCGCAGGCTGCTGCGCATCTACAA TAAGCTGAAGGATATGCACA
Downstream 100 bases:
>100_bases AGGGGCGATAAATGGCATTTGAAGATCGTTTAACAGCCTCATTTCGTGGGGTTGAATTTCTACTCGAAGAGGCAGAAGGC AACAGCGGACGCCGTGCTAT
Product: phage tail tape measure family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 583; Mature: 582
Protein sequence:
>583_residues MAQQLKTDIILNLAGNLAAKAKQYGASMSDFARKNERAMTLLKTSADAAGRGIDSLGNRYVGLVTAVATGAAVRNVAALE AQMVRIGTNAKLSSDQVALLTKQLEAMSVQKDIRIGTDQLAAGVDELLGKTGDFEFVQENLENMGLFMQAFGADARSTGA LFAQFREKGIRDAKDVMNTIDELYGQFAIGSVNVKDLADISEQLFATYQGKGPEAISQMSALVQLFAKAKGNANESLTSI QAVFATFSDKKKVEFLNRQGIEVFKKGTKELREPVELLLEILDKAKNDPLKLGDVFDQTSLQGLASLYSQENKDLLRSMI SGTAEMGATQEAAAKNAATLNAATTALNNSFNKFANERLAEPIQELADAINSVDDETIQNWLKWAEAAGYGVGLLLAGKK AVDAYRWVKGGSGGSGGAAGGGFADLGVMPVYVVNMPGGGMGGAAGGLPEGIGGDGKPTGKPSAKSKWPSIFSKQNLAAI GTIGYASTMIPEWSPIDVRRASEVDRTGLPESFVPAPGLLDVWDELKGLFSGSSNGSMAGNSYMAGQTGGEMKLKVEVSD DRVKVTPTYLPKGFTIDPDMGAN
Sequences:
>Translated_583_residues MAQQLKTDIILNLAGNLAAKAKQYGASMSDFARKNERAMTLLKTSADAAGRGIDSLGNRYVGLVTAVATGAAVRNVAALE AQMVRIGTNAKLSSDQVALLTKQLEAMSVQKDIRIGTDQLAAGVDELLGKTGDFEFVQENLENMGLFMQAFGADARSTGA LFAQFREKGIRDAKDVMNTIDELYGQFAIGSVNVKDLADISEQLFATYQGKGPEAISQMSALVQLFAKAKGNANESLTSI QAVFATFSDKKKVEFLNRQGIEVFKKGTKELREPVELLLEILDKAKNDPLKLGDVFDQTSLQGLASLYSQENKDLLRSMI SGTAEMGATQEAAAKNAATLNAATTALNNSFNKFANERLAEPIQELADAINSVDDETIQNWLKWAEAAGYGVGLLLAGKK AVDAYRWVKGGSGGSGGAAGGGFADLGVMPVYVVNMPGGGMGGAAGGLPEGIGGDGKPTGKPSAKSKWPSIFSKQNLAAI GTIGYASTMIPEWSPIDVRRASEVDRTGLPESFVPAPGLLDVWDELKGLFSGSSNGSMAGNSYMAGQTGGEMKLKVEVSD DRVKVTPTYLPKGFTIDPDMGAN >Mature_582_residues AQQLKTDIILNLAGNLAAKAKQYGASMSDFARKNERAMTLLKTSADAAGRGIDSLGNRYVGLVTAVATGAAVRNVAALEA QMVRIGTNAKLSSDQVALLTKQLEAMSVQKDIRIGTDQLAAGVDELLGKTGDFEFVQENLENMGLFMQAFGADARSTGAL FAQFREKGIRDAKDVMNTIDELYGQFAIGSVNVKDLADISEQLFATYQGKGPEAISQMSALVQLFAKAKGNANESLTSIQ AVFATFSDKKKVEFLNRQGIEVFKKGTKELREPVELLLEILDKAKNDPLKLGDVFDQTSLQGLASLYSQENKDLLRSMIS GTAEMGATQEAAAKNAATLNAATTALNNSFNKFANERLAEPIQELADAINSVDDETIQNWLKWAEAAGYGVGLLLAGKKA VDAYRWVKGGSGGSGGAAGGGFADLGVMPVYVVNMPGGGMGGAAGGLPEGIGGDGKPTGKPSAKSKWPSIFSKQNLAAIG TIGYASTMIPEWSPIDVRRASEVDRTGLPESFVPAPGLLDVWDELKGLFSGSSNGSMAGNSYMAGQTGGEMKLKVEVSDD RVKVTPTYLPKGFTIDPDMGAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61521; Mature: 61390
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQQLKTDIILNLAGNLAAKAKQYGASMSDFARKNERAMTLLKTSADAAGRGIDSLGNRY CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHCCCHHHHCCHH VGLVTAVATGAAVRNVAALEAQMVRIGTNAKLSSDQVALLTKQLEAMSVQKDIRIGTDQL HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHH AAGVDELLGKTGDFEFVQENLENMGLFMQAFGADARSTGALFAQFREKGIRDAKDVMNTI HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHH DELYGQFAIGSVNVKDLADISEQLFATYQGKGPEAISQMSALVQLFAKAKGNANESLTSI HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH QAVFATFSDKKKVEFLNRQGIEVFKKGTKELREPVELLLEILDKAKNDPLKLGDVFDQTS HHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LQGLASLYSQENKDLLRSMISGTAEMGATQEAAAKNAATLNAATTALNNSFNKFANERLA HHHHHHHHCCCCHHHHHHHHHCHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH EPIQELADAINSVDDETIQNWLKWAEAAGYGVGLLLAGKKAVDAYRWVKGGSGGSGGAAG HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCC GGFADLGVMPVYVVNMPGGGMGGAAGGLPEGIGGDGKPTGKPSAKSKWPSIFSKQNLAAI CCCHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHE GTIGYASTMIPEWSPIDVRRASEVDRTGLPESFVPAPGLLDVWDELKGLFSGSSNGSMAG ECHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC NSYMAGQTGGEMKLKVEVSDDRVKVTPTYLPKGFTIDPDMGAN CCEECCCCCCCEEEEEEECCCEEEEEECCCCCCCEECCCCCCC >Mature Secondary Structure AQQLKTDIILNLAGNLAAKAKQYGASMSDFARKNERAMTLLKTSADAAGRGIDSLGNRY CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHCCCHHHHCCHH VGLVTAVATGAAVRNVAALEAQMVRIGTNAKLSSDQVALLTKQLEAMSVQKDIRIGTDQL HHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHH AAGVDELLGKTGDFEFVQENLENMGLFMQAFGADARSTGALFAQFREKGIRDAKDVMNTI HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHH DELYGQFAIGSVNVKDLADISEQLFATYQGKGPEAISQMSALVQLFAKAKGNANESLTSI HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH QAVFATFSDKKKVEFLNRQGIEVFKKGTKELREPVELLLEILDKAKNDPLKLGDVFDQTS HHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH LQGLASLYSQENKDLLRSMISGTAEMGATQEAAAKNAATLNAATTALNNSFNKFANERLA HHHHHHHHCCCCHHHHHHHHHCHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH EPIQELADAINSVDDETIQNWLKWAEAAGYGVGLLLAGKKAVDAYRWVKGGSGGSGGAAG HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCC GGFADLGVMPVYVVNMPGGGMGGAAGGLPEGIGGDGKPTGKPSAKSKWPSIFSKQNLAAI CCCHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHE GTIGYASTMIPEWSPIDVRRASEVDRTGLPESFVPAPGLLDVWDELKGLFSGSSNGSMAG ECHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC NSYMAGQTGGEMKLKVEVSDDRVKVTPTYLPKGFTIDPDMGAN CCEECCCCCCCEEEEEEECCCEEEEEECCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA