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The map label for this gene is 147673724

Identifier: 147673724

GI number: 147673724

Start: 798848

End: 799585

Strand: Direct

Name: 147673724

Synonym: VC0395_A0789

Alternate gene names: NA

Gene position: 798848-799585 (Clockwise)

Preceding gene: 147674995

Following gene: 147674944

Centisome position: 26.42

GC content: 45.66

Gene sequence:

>738_bases
ATGTCAGACACTTACAACAAAAATGCGGCAGGAAAAGACAAAAATGCGGATCACATTTTTGAAATCAAAGGAATAATGCG
ATTCCCCGAAAGGCTAAAGGAAGCTATTGGGGATATTTCAATTCGCAGCTTTGCGAAGAAATGTGGACTATCCGAGGCGG
TTGTGCGCAATTATCTAGGCGGAAAAACATTCCCATCCTTAGATAAGCTCGCGCTGATATCAGAAATCAGCAACAAACCA
CTTGAATGGCTATGTTCAGGAGCCACAACCGATTATTCAGTTAGTGAGCCATCTGCCTTTTATAGCATCCCCATGGATGA
GTTCGTGATGATACCTGGCTATCGAATACAGGTTTCAGCAGGTCACGGCGCGCTTAACCCAGAGAATATGGAGCCGACTC
GGTATCTGGCATTTCGCCGTAAGTGGCTGAACTATAGAGGGTTCAACGAAAAGGATTTAGCGATCGTGTGGGCAAAGGGC
GACAGCATGGAGCCCACGATCCACAACAATGACACGCTTGTAGTTCACATGGCTAGGAACAAGCCGCAAGATGGACACAT
CTATATTTTCAGGAATGGTGATGAGCTTTTTGTGAAGCGGTACCAGTCAATGTTAGGAACATGGCGACTGATAAGCGACA
ACCCTATATATGACAAGCTGGATATTCCAAAGCATGAACAGCACCAGTTTGATGTGGTTGGTCAGGTAGTTCACATCGCC
AAAGACATCGGAGATTGA

Upstream 100 bases:

>100_bases
CGTGTAACACATAATTGATCAGAAAAATGCGCACGTCAATATCATTGCGCATTTTTCTTTCGACAGGTGCGAATTAAAAT
AAATAGAGAGAAAATGTTTA

Downstream 100 bases:

>100_bases
TTTAAAGGTTTAAAGCGGTTTTAAAGCCTTTTTGCGATGTGCGCTCTAATGCTCATTTCAATAGTCTTAAAGTGAACTTT
TAAAGAGGATTGCTCAAAAC

Product: prophage MuSo2, Cro/CI family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSDTYNKNAAGKDKNADHIFEIKGIMRFPERLKEAIGDISIRSFAKKCGLSEAVVRNYLGGKTFPSLDKLALISEISNKP
LEWLCSGATTDYSVSEPSAFYSIPMDEFVMIPGYRIQVSAGHGALNPENMEPTRYLAFRRKWLNYRGFNEKDLAIVWAKG
DSMEPTIHNNDTLVVHMARNKPQDGHIYIFRNGDELFVKRYQSMLGTWRLISDNPIYDKLDIPKHEQHQFDVVGQVVHIA
KDIGD

Sequences:

>Translated_245_residues
MSDTYNKNAAGKDKNADHIFEIKGIMRFPERLKEAIGDISIRSFAKKCGLSEAVVRNYLGGKTFPSLDKLALISEISNKP
LEWLCSGATTDYSVSEPSAFYSIPMDEFVMIPGYRIQVSAGHGALNPENMEPTRYLAFRRKWLNYRGFNEKDLAIVWAKG
DSMEPTIHNNDTLVVHMARNKPQDGHIYIFRNGDELFVKRYQSMLGTWRLISDNPIYDKLDIPKHEQHQFDVVGQVVHIA
KDIGD
>Mature_244_residues
SDTYNKNAAGKDKNADHIFEIKGIMRFPERLKEAIGDISIRSFAKKCGLSEAVVRNYLGGKTFPSLDKLALISEISNKPL
EWLCSGATTDYSVSEPSAFYSIPMDEFVMIPGYRIQVSAGHGALNPENMEPTRYLAFRRKWLNYRGFNEKDLAIVWAKGD
SMEPTIHNNDTLVVHMARNKPQDGHIYIFRNGDELFVKRYQSMLGTWRLISDNPIYDKLDIPKHEQHQFDVVGQVVHIAK
DIGD

Specific function: Unknown

COG id: COG2932

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR019759
- InterPro:   IPR015927
- InterPro:   IPR011056 [H]

Pfam domain/function: PF01381 HTH_3; PF00717 Peptidase_S24 [H]

EC number: NA

Molecular weight: Translated: 27900; Mature: 27769

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTYNKNAAGKDKNADHIFEIKGIMRFPERLKEAIGDISIRSFAKKCGLSEAVVRNYLG
CCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHC
GKTFPSLDKLALISEISNKPLEWLCSGATTDYSVSEPSAFYSIPMDEFVMIPGYRIQVSA
CCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCEEEECCHHHEEECCCEEEEEEC
GHGALNPENMEPTRYLAFRRKWLNYRGFNEKDLAIVWAKGDSMEPTIHNNDTLVVHMARN
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEECCCEEEEEEECC
KPQDGHIYIFRNGDELFVKRYQSMLGTWRLISDNPIYDKLDIPKHEQHQFDVVGQVVHIA
CCCCCEEEEEECCCHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH
KDIGD
HHCCC
>Mature Secondary Structure 
SDTYNKNAAGKDKNADHIFEIKGIMRFPERLKEAIGDISIRSFAKKCGLSEAVVRNYLG
CCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHC
GKTFPSLDKLALISEISNKPLEWLCSGATTDYSVSEPSAFYSIPMDEFVMIPGYRIQVSA
CCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCEEEECCHHHEEECCCEEEEEEC
GHGALNPENMEPTRYLAFRRKWLNYRGFNEKDLAIVWAKGDSMEPTIHNNDTLVVHMARN
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEECCCEEEEEEECC
KPQDGHIYIFRNGDELFVKRYQSMLGTWRLISDNPIYDKLDIPKHEQHQFDVVGQVVHIA
CCCCCEEEEEECCCHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH
KDIGD
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]