| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673717
Identifier: 147673717
GI number: 147673717
Start: 1123876
End: 1124460
Strand: Reverse
Name: 147673717
Synonym: VC0395_A1071
Alternate gene names: NA
Gene position: 1124460-1123876 (Counterclockwise)
Preceding gene: 147675658
Following gene: 147675657
Centisome position: 37.18
GC content: 48.21
Gene sequence:
>585_bases ATGACTAAATACGTGCGGCTCAACAATGTCGGAGCTGCTTGGATTAAGTCAACCAGAGAAAAATACGGCCTGACGACCAC TCAGGCCGCTGAAATGTGCTGTGTAAGCACGCAAACATGGCGACGTTGGGAGAATGGCTCTTATCCCATGAATCCATGCA TCTTCCATTACTGGTTGTCGGTCTTGGAGAAGCGGGTTTTACCTCGCAGCGGCCTTGAAGGCAAACGTTGGCAAGGTTGG TACTTCGACGAAGGCAAGTTGGTCACGCCATTAGGTCATCGGTTAGGCGCAGCACAAATCGAAGATCAACAAAACCAAAT CAACCAAACACGTGCAGTCTATCGTCAGGCACACAAAGTTCGCGAGCATGCCAAAAGTGGATTACATGAAGCAGGTGAAT CATGGTTCGGTTGGCAGTTTAAAGGTGGCTTCCTTGTGAGTCCGGATGAACGCAAAATCGCAGCAGACGAACTCTATGTC ATGATGGTCGGTTATGATGCAATGACATACGCTAAAGCCTACAAAAAACCACCAATAGACACGGCCAAAGCCACCGTACT AAACCTAGAGACAAAATGTTCCTAG
Upstream 100 bases:
>100_bases CTACAAGTGTTTAAGCGCGATAAGGAGCTGAGCGCTGCGCTCGGAGTATTCGAACGCAAACTCGGCATTCCAGAGCAAGA AACTGTGATAAGGATATGTT
Downstream 100 bases:
>100_bases TGCGCATTATGTGGCGCGGCATTATGTTGAGGGGCAGTCGTCAGTACCATTGCGCCAGCACTGACGGCCTCACTTGCAGC AGAACGTGGGCAGCTTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MTKYVRLNNVGAAWIKSTREKYGLTTTQAAEMCCVSTQTWRRWENGSYPMNPCIFHYWLSVLEKRVLPRSGLEGKRWQGW YFDEGKLVTPLGHRLGAAQIEDQQNQINQTRAVYRQAHKVREHAKSGLHEAGESWFGWQFKGGFLVSPDERKIAADELYV MMVGYDAMTYAKAYKKPPIDTAKATVLNLETKCS
Sequences:
>Translated_194_residues MTKYVRLNNVGAAWIKSTREKYGLTTTQAAEMCCVSTQTWRRWENGSYPMNPCIFHYWLSVLEKRVLPRSGLEGKRWQGW YFDEGKLVTPLGHRLGAAQIEDQQNQINQTRAVYRQAHKVREHAKSGLHEAGESWFGWQFKGGFLVSPDERKIAADELYV MMVGYDAMTYAKAYKKPPIDTAKATVLNLETKCS >Mature_193_residues TKYVRLNNVGAAWIKSTREKYGLTTTQAAEMCCVSTQTWRRWENGSYPMNPCIFHYWLSVLEKRVLPRSGLEGKRWQGWY FDEGKLVTPLGHRLGAAQIEDQQNQINQTRAVYRQAHKVREHAKSGLHEAGESWFGWQFKGGFLVSPDERKIAADELYVM MVGYDAMTYAKAYKKPPIDTAKATVLNLETKCS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22302; Mature: 22170
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKYVRLNNVGAAWIKSTREKYGLTTTQAAEMCCVSTQTWRRWENGSYPMNPCIFHYWLS CCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHCCCCCCCCCHHHHHHHHH VLEKRVLPRSGLEGKRWQGWYFDEGKLVTPLGHRLGAAQIEDQQNQINQTRAVYRQAHKV HHHHHCCCCCCCCCCCCCCEEECCCCEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH REHAKSGLHEAGESWFGWQFKGGFLVSPDERKIAADELYVMMVGYDAMTYAKAYKKPPID HHHHHHHHHHHCCCCCCEEECCCEEECCCCCCCHHHHEEEEEECCHHHHHHHHHCCCCCC TAKATVLNLETKCS CHHEEEEECCCCCC >Mature Secondary Structure TKYVRLNNVGAAWIKSTREKYGLTTTQAAEMCCVSTQTWRRWENGSYPMNPCIFHYWLS CCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHCCCCCCCCCHHHHHHHHH VLEKRVLPRSGLEGKRWQGWYFDEGKLVTPLGHRLGAAQIEDQQNQINQTRAVYRQAHKV HHHHHCCCCCCCCCCCCCCEEECCCCEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH REHAKSGLHEAGESWFGWQFKGGFLVSPDERKIAADELYVMMVGYDAMTYAKAYKKPPID HHHHHHHHHHHCCCCCCEEECCCEEECCCCCCCHHHHEEEEEECCHHHHHHHHHCCCCCC TAKATVLNLETKCS CHHEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA