| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is galU [H]
Identifier: 147673562
GI number: 147673562
Start: 2962719
End: 2963642
Strand: Reverse
Name: galU [H]
Synonym: VC0395_A2813
Alternate gene names: 147673562
Gene position: 2963642-2962719 (Counterclockwise)
Preceding gene: 147675776
Following gene: 147674724
Centisome position: 98.0
GC content: 47.73
Gene sequence:
>924_bases GTGGTAGAGTCAGCAAAAAATTTCTCCCTAGCACACCATAGAGCAAAAATGATGATTAAGAAGTGTCTATTTCCGGCAGC TGGCTACGGTACCCGATTCCTACCAGCGACTAAGTCGATGCCCAAAGAGATGATGCCTGTTGTTAACAAACCGCTGATTG AGTACGGTGTTGATGAAGCGATTCAAGCGGGTATCACAGGCATGTGTATTGTGACAGGTCGTGGTAAGCATTCGATCATG GATCACTTTGACATGAACTACGAGTTAGAGCACCAAATCCGCGGTACGAATAAAGAAGAGCTATTGGGTGATATCCGTAA AATCATCGAAAGCGCTAACTTTACTTTTATTCGCCAACGCGAAATGAAAGGCTTGGGTCACGCTATCTTAACGGGCAAAG AGCTGGTCGGTGATGAGCCGTTTGCCGTTGTGCTAGCGGACGACCTGTGTGTGAACGAAGAGCAAGGCGTACTGGCACAG ATGGTTGCACTGTACAAACAGTTCCGCTGCTCTATCGTCGCTGTGCAAGAGGTTCCAGAAAACGAAACTCACAAATACGG CGTGATCGCAGGTGAGATGATCAAAGACGATCTGTTCCGCGTCGATAACATGGTCGAAAAACCAGAGCCGGGCACAGCGC CAAGCAACCTCGCCATCATTGGCCGTTATATCCTCACGCCAGATATTTTTGATCTGATTGAGCAGACCGAGCCGGGCAAA GGCGGTGAAATTCAAATCACTGACGCGCTGCTCAAACAAGCCAAAGCGGGTTGTGTACTGGCTTATAAATTCAAAGGTAA GCGCTTCGACTGTGGTAGCGTTGAAGGCTATATCGAAGCCACCAACTTCTGCTACGAAAACATGTACAAGAAAAACGACC AAAAAGTGGAGTTGGCTAAAAAGTCGACGCACAAAGGTCAGTAA
Upstream 100 bases:
>100_bases GAATTCACCATGAGTGAGTGGAGAAAAATGTAGTAACAATGCGACTTCACACACATTTTTTCGGCCAAGAGCCTCAACGT AATGCAGTCGCGAATCAGAA
Downstream 100 bases:
>100_bases TTCGCTATCTAAACAATGCATTTAAAAGCCAACCTGTAACCTCTCAGGTTGGCTTTTTTGCTTTTGATACAACTGTTTTT TTATCCAGTAATTGCTTGCA
Product: UTP--glucose-1-phosphate uridylyltransferase
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MVESAKNFSLAHHRAKMMIKKCLFPAAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVDEAIQAGITGMCIVTGRGKHSIM DHFDMNYELEHQIRGTNKEELLGDIRKIIESANFTFIRQREMKGLGHAILTGKELVGDEPFAVVLADDLCVNEEQGVLAQ MVALYKQFRCSIVAVQEVPENETHKYGVIAGEMIKDDLFRVDNMVEKPEPGTAPSNLAIIGRYILTPDIFDLIEQTEPGK GGEIQITDALLKQAKAGCVLAYKFKGKRFDCGSVEGYIEATNFCYENMYKKNDQKVELAKKSTHKGQ
Sequences:
>Translated_307_residues MVESAKNFSLAHHRAKMMIKKCLFPAAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVDEAIQAGITGMCIVTGRGKHSIM DHFDMNYELEHQIRGTNKEELLGDIRKIIESANFTFIRQREMKGLGHAILTGKELVGDEPFAVVLADDLCVNEEQGVLAQ MVALYKQFRCSIVAVQEVPENETHKYGVIAGEMIKDDLFRVDNMVEKPEPGTAPSNLAIIGRYILTPDIFDLIEQTEPGK GGEIQITDALLKQAKAGCVLAYKFKGKRFDCGSVEGYIEATNFCYENMYKKNDQKVELAKKSTHKGQ >Mature_307_residues MVESAKNFSLAHHRAKMMIKKCLFPAAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVDEAIQAGITGMCIVTGRGKHSIM DHFDMNYELEHQIRGTNKEELLGDIRKIIESANFTFIRQREMKGLGHAILTGKELVGDEPFAVVLADDLCVNEEQGVLAQ MVALYKQFRCSIVAVQEVPENETHKYGVIAGEMIKDDLFRVDNMVEKPEPGTAPSNLAIIGRYILTPDIFDLIEQTEPGK GGEIQITDALLKQAKAGCVLAYKFKGKRFDCGSVEGYIEATNFCYENMYKKNDQKVELAKKSTHKGQ
Specific function: May play a role in stationary phase survival [H]
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=270, Percent_Identity=42.962962962963, Blast_Score=205, Evalue=3e-54, Organism=Escherichia coli, GI1788355, Length=269, Percent_Identity=38.2899628252788, Blast_Score=181, Evalue=4e-47, Organism=Escherichia coli, GI1788351, Length=275, Percent_Identity=26.5454545454545, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790224, Length=267, Percent_Identity=26.5917602996255, Blast_Score=76, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6320148, Length=280, Percent_Identity=23.9285714285714, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 34274; Mature: 34274
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVESAKNFSLAHHRAKMMIKKCLFPAAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVDEA CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHCHHHH IQAGITGMCIVTGRGKHSIMDHFDMNYELEHQIRGTNKEELLGDIRKIIESANFTFIRQR HHCCCCEEEEEECCCCHHHHHHCCCCEEEEHHCCCCCHHHHHHHHHHHHHCCCCEEEEHH EMKGLGHAILTGKELVGDEPFAVVLADDLCVNEEQGVLAQMVALYKQFRCSIVAVQEVPE HHHCCCHHHHCCHHHHCCCCEEEEEECCHHCCCCCCHHHHHHHHHHHHHCEEEEEECCCC NETHKYGVIAGEMIKDDLFRVDNMVEKPEPGTAPSNLAIIGRYILTPDIFDLIEQTEPGK CCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCC GGEIQITDALLKQAKAGCVLAYKFKGKRFDCGSVEGYIEATNFCYENMYKKNDQKVELAK CCEEEEHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH KSTHKGQ HHCCCCC >Mature Secondary Structure MVESAKNFSLAHHRAKMMIKKCLFPAAGYGTRFLPATKSMPKEMMPVVNKPLIEYGVDEA CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHCHHHH IQAGITGMCIVTGRGKHSIMDHFDMNYELEHQIRGTNKEELLGDIRKIIESANFTFIRQR HHCCCCEEEEEECCCCHHHHHHCCCCEEEEHHCCCCCHHHHHHHHHHHHHCCCCEEEEHH EMKGLGHAILTGKELVGDEPFAVVLADDLCVNEEQGVLAQMVALYKQFRCSIVAVQEVPE HHHCCCHHHHCCHHHHCCCCEEEEEECCHHCCCCCCHHHHHHHHHHHHHCEEEEEECCCC NETHKYGVIAGEMIKDDLFRVDNMVEKPEPGTAPSNLAIIGRYILTPDIFDLIEQTEPGK CCCCEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHCCCCC GGEIQITDALLKQAKAGCVLAYKFKGKRFDCGSVEGYIEATNFCYENMYKKNDQKVELAK CCEEEEHHHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH KSTHKGQ HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]