| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673476
Identifier: 147673476
GI number: 147673476
Start: 700090
End: 700320
Strand: Direct
Name: 147673476
Synonym: VC0395_A0669
Alternate gene names: NA
Gene position: 700090-700320 (Clockwise)
Preceding gene: 147674129
Following gene: 147675569
Centisome position: 23.15
GC content: 48.92
Gene sequence:
>231_bases ATGAGCGATCTGTTTGATAAAGCCCAAGAGCGTGATCAGGAATTCCTTGCCTTAGCCTTAAGCAACCATCACGCAGCACG GCGCAATATGATTCAAGAGCAGCCAGATGAAGATGAAGAAGGCAATCGCTACTGCCTCAGCTGTGGTAGCGAAATACCCA AAAGAAGAATAGAAGCTCAGCCTGAGGCTGTGCGGTGCGTCAGTTGTCAGTCTAGAAAGGAGCCACATTGA
Upstream 100 bases:
>100_bases CTTACTTAGGCTTGCGTACTTTGGATGGTTTCGCACCTTATCCCAAAGGCAGCGGCCACAAAGCCACCTCCGCCGTGGTG GATGCCATTAAGGGGCGTCA
Downstream 100 bases:
>100_bases TGGATTTATTTGTGAAGTATTTCTCTATCGCGTGGACGGTCTTTTCATCCCTCGTCATGGTTGGCTTGGTTCTGCTTTCC AAAACCTATGCCAAGCGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MSDLFDKAQERDQEFLALALSNHHAARRNMIQEQPDEDEEGNRYCLSCGSEIPKRRIEAQPEAVRCVSCQSRKEPH
Sequences:
>Translated_76_residues MSDLFDKAQERDQEFLALALSNHHAARRNMIQEQPDEDEEGNRYCLSCGSEIPKRRIEAQPEAVRCVSCQSRKEPH >Mature_75_residues SDLFDKAQERDQEFLALALSNHHAARRNMIQEQPDEDEEGNRYCLSCGSEIPKRRIEAQPEAVRCVSCQSRKEPH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8800; Mature: 8669
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS51128 ZF_DKSA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLFDKAQERDQEFLALALSNHHAARRNMIQEQPDEDEEGNRYCLSCGSEIPKRRIEAQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHCCC PEAVRCVSCQSRKEPH CHHHHHHCCCCCCCCC >Mature Secondary Structure SDLFDKAQERDQEFLALALSNHHAARRNMIQEQPDEDEEGNRYCLSCGSEIPKRRIEAQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHHCCC PEAVRCVSCQSRKEPH CHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA