| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673442
Identifier: 147673442
GI number: 147673442
Start: 746677
End: 747282
Strand: Reverse
Name: 147673442
Synonym: VC0395_A0720
Alternate gene names: NA
Gene position: 747282-746677 (Counterclockwise)
Preceding gene: 147675758
Following gene: 147674182
Centisome position: 24.71
GC content: 46.04
Gene sequence:
>606_bases TTGGGTAGAACAATTCTCTTCGGGTTAGGGGTTAAGGTTTATCTCAATGAAGTCCCATCAAGAACGACTAAAAATAACAA TTCAAAAGGAAAGATTATGAAACGCCTGAGCACTGTTTTACTGATGTCGGTCGTCTCCGCTTCAGCCTATGCGGATAACA CCTGCTTCAGCCAAAAATACGATGCCTACATCGATGCTTCATTGAACTGGTATGCCGATCTCACCAAACTGACCAGTGAA CGTAACCCAGATTTAGCCGAAGTGAGTCAATGGTTTTTAGAAGGAAGGCAGCACCACTTTGCCTTGAATCGCGCGGCTGT TCATTACTACTTACAACATGACCCAAGTAAAGTCGCAACCACCCAACATGTTGAATCATGGTTAAAACTAGAACAGCCAG AAATCAAACAATTGGCGACACGCAGCGATGAGCTTGGCAAGTTAGCCAGCGTAACCTTTGCCGACCGACAAGCCACACCT CACCCGAAAAATTATGAACTGCGCTCCGCGTTGGCAGACCTGCTCAGTCACCCTAAGCAGATCGAATCGGCGCTGAATCG CTATAATCAGGCGATTGAAAAAGTCGAAGCGATGAAGTGCCAATAA
Upstream 100 bases:
>100_bases CAAGCTAGATCGCAGGATTTCCCTCTGAGCTCGTTTACAATGTTTCGCCTTGAGATTTACAATTTAGTAAACAATATTTT AACCTAACGCCCCTAAATGA
Downstream 100 bases:
>100_bases TCACACACCAATGCAATCAAGGCTTTCCGAATTAAGACGGGACATTGTTCCCGTTTTGAATTAGATTGTCCCGCTTGAAG CCCATCAATCAGAATAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MGRTILFGLGVKVYLNEVPSRTTKNNNSKGKIMKRLSTVLLMSVVSASAYADNTCFSQKYDAYIDASLNWYADLTKLTSE RNPDLAEVSQWFLEGRQHHFALNRAAVHYYLQHDPSKVATTQHVESWLKLEQPEIKQLATRSDELGKLASVTFADRQATP HPKNYELRSALADLLSHPKQIESALNRYNQAIEKVEAMKCQ
Sequences:
>Translated_201_residues MGRTILFGLGVKVYLNEVPSRTTKNNNSKGKIMKRLSTVLLMSVVSASAYADNTCFSQKYDAYIDASLNWYADLTKLTSE RNPDLAEVSQWFLEGRQHHFALNRAAVHYYLQHDPSKVATTQHVESWLKLEQPEIKQLATRSDELGKLASVTFADRQATP HPKNYELRSALADLLSHPKQIESALNRYNQAIEKVEAMKCQ >Mature_200_residues GRTILFGLGVKVYLNEVPSRTTKNNNSKGKIMKRLSTVLLMSVVSASAYADNTCFSQKYDAYIDASLNWYADLTKLTSER NPDLAEVSQWFLEGRQHHFALNRAAVHYYLQHDPSKVATTQHVESWLKLEQPEIKQLATRSDELGKLASVTFADRQATPH PKNYELRSALADLLSHPKQIESALNRYNQAIEKVEAMKCQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22815; Mature: 22684
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRTILFGLGVKVYLNEVPSRTTKNNNSKGKIMKRLSTVLLMSVVSASAYADNTCFSQKY CCCEEEEECCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC DAYIDASLNWYADLTKLTSERNPDLAEVSQWFLEGRQHHFALNRAAVHYYLQHDPSKVAT CCEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHH TQHVESWLKLEQPEIKQLATRSDELGKLASVTFADRQATPHPKNYELRSALADLLSHPKQ HHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHCHHH IESALNRYNQAIEKVEAMKCQ HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GRTILFGLGVKVYLNEVPSRTTKNNNSKGKIMKRLSTVLLMSVVSASAYADNTCFSQKY CCEEEEECCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC DAYIDASLNWYADLTKLTSERNPDLAEVSQWFLEGRQHHFALNRAAVHYYLQHDPSKVAT CCEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHH TQHVESWLKLEQPEIKQLATRSDELGKLASVTFADRQATPHPKNYELRSALADLLSHPKQ HHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHHCHHH IESALNRYNQAIEKVEAMKCQ HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA