| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673327
Identifier: 147673327
GI number: 147673327
Start: 1593662
End: 1594522
Strand: Reverse
Name: 147673327
Synonym: VC0395_A1483
Alternate gene names: NA
Gene position: 1594522-1593662 (Counterclockwise)
Preceding gene: 147673411
Following gene: 147673914
Centisome position: 52.73
GC content: 49.25
Gene sequence:
>861_bases ATGGCAAAGATTGCATGGCGAGAAGCAAGCGCACTGGATCCATCGCTGTTGTCATTAAATCACTTTTTCTCTGTGCCGCC AGAATATGCGCAGACCTTGACCGGAGGTCTCACTAATCGTTGCTGGAAAATCGTTGCGGGCGATCGTGCTTTCGTGTGGC GTCCAGCAACGCCTATTACCAAAGCTTTCTCTATTTCTCGATTTCAAGAGTATCAAATCCTCAAAGCGATTGAGCATGAT CATATCGGCCCGAAAGCCGAACTGGTTAATGAACACGGCTTGCTTGTGGAATGGATCGATGGCGAATCACTGCGTGATGG TATCGCTTTTGACGTGGTATTGAAAACGCAAACGCGCATTCATGAGTTGGATATCCATCGCATTCCGGTAGCGCCTTTTA ACTATCTTGGTCGAGTTGACCACTACTGGCTACAGATCCGAGATGACCTGAAAACCGATGAGGTTAAAGCGCTCTATGAG CAGTGGCGGTCTGTGCCCAATCTCACCGATGTGGGGCAAGTGCTTTGTCACTTTGATCTGGCTGGCTATAACATGGTGAA AACCGAGCAAGGACAAAGAGTCATCGATTGGGAATACGCCGCCTTGGCCGATCCGCGCATTGATTTAGCGCTGAGTATTG ATGTCGCTGGTGAAAACGTACTTGATGCGGTATTCCGTTACTGCCAACGGCGCGAATTATCCGATATCGATGCTTGGGTC TCTGGTGTTCAAGCTTGGCGACCGCGTACCACTATGATGGCAATGCTCTGGTATCTATTGGCTTATCAACTTTGGGCTGA CGAACTTTATCGAGATCAGGCGCAGCAACTTGCACAGACTTTGCAGTCGAACCAAGGCTAG
Upstream 100 bases:
>100_bases AACAGGTTTAATTGAGTGGGCTGACGAAACCGAAATCCGTAAGCAACAGTCAAAGAGCTTACTCGGTTTGTAATCCACTA GCACAGGGAAGGAGTTGGTT
Downstream 100 bases:
>100_bases CCAAAAGCATAACCAAGCATTACGTGATGAGCGGATGCTGCCGTCAGCGGTAACCTTGTTTGGAGAAATGCGGTTCAAAT TCTCTTTACGGTGAAATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: Thiamin Kinase; Phosphotransferase Family; Antibiotic Resistance Protein
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MAKIAWREASALDPSLLSLNHFFSVPPEYAQTLTGGLTNRCWKIVAGDRAFVWRPATPITKAFSISRFQEYQILKAIEHD HIGPKAELVNEHGLLVEWIDGESLRDGIAFDVVLKTQTRIHELDIHRIPVAPFNYLGRVDHYWLQIRDDLKTDEVKALYE QWRSVPNLTDVGQVLCHFDLAGYNMVKTEQGQRVIDWEYAALADPRIDLALSIDVAGENVLDAVFRYCQRRELSDIDAWV SGVQAWRPRTTMMAMLWYLLAYQLWADELYRDQAQQLAQTLQSNQG
Sequences:
>Translated_286_residues MAKIAWREASALDPSLLSLNHFFSVPPEYAQTLTGGLTNRCWKIVAGDRAFVWRPATPITKAFSISRFQEYQILKAIEHD HIGPKAELVNEHGLLVEWIDGESLRDGIAFDVVLKTQTRIHELDIHRIPVAPFNYLGRVDHYWLQIRDDLKTDEVKALYE QWRSVPNLTDVGQVLCHFDLAGYNMVKTEQGQRVIDWEYAALADPRIDLALSIDVAGENVLDAVFRYCQRRELSDIDAWV SGVQAWRPRTTMMAMLWYLLAYQLWADELYRDQAQQLAQTLQSNQG >Mature_285_residues AKIAWREASALDPSLLSLNHFFSVPPEYAQTLTGGLTNRCWKIVAGDRAFVWRPATPITKAFSISRFQEYQILKAIEHDH IGPKAELVNEHGLLVEWIDGESLRDGIAFDVVLKTQTRIHELDIHRIPVAPFNYLGRVDHYWLQIRDDLKTDEVKALYEQ WRSVPNLTDVGQVLCHFDLAGYNMVKTEQGQRVIDWEYAALADPRIDLALSIDVAGENVLDAVFRYCQRRELSDIDAWVS GVQAWRPRTTMMAMLWYLLAYQLWADELYRDQAQQLAQTLQSNQG
Specific function: Unknown
COG id: COG0510
COG function: function code M; Predicted choline kinase involved in LPS biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32931; Mature: 32800
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKIAWREASALDPSLLSLNHFFSVPPEYAQTLTGGLTNRCWKIVAGDRAFVWRPATPIT CCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEECCEEEEEECCCCHH KAFSISRFQEYQILKAIEHDHIGPKAELVNEHGLLVEWIDGESLRDGIAFDVVLKTQTRI HHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEECCCCHHCCCEEEEEEECHHHH HELDIHRIPVAPFNYLGRVDHYWLQIRDDLKTDEVKALYEQWRSVPNLTDVGQVLCHFDL HHCCCEECCCCCHHHHHCHHHHHEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AGYNMVKTEQGQRVIDWEYAALADPRIDLALSIDVAGENVLDAVFRYCQRRELSDIDAWV CCCCEEECCCCCEEEEEHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHH SGVQAWRPRTTMMAMLWYLLAYQLWADELYRDQAQQLAQTLQSNQG HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AKIAWREASALDPSLLSLNHFFSVPPEYAQTLTGGLTNRCWKIVAGDRAFVWRPATPIT CCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEECCEEEEEECCCCHH KAFSISRFQEYQILKAIEHDHIGPKAELVNEHGLLVEWIDGESLRDGIAFDVVLKTQTRI HHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEECCCCHHCCCEEEEEEECHHHH HELDIHRIPVAPFNYLGRVDHYWLQIRDDLKTDEVKALYEQWRSVPNLTDVGQVLCHFDL HHCCCEECCCCCHHHHHCHHHHHEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH AGYNMVKTEQGQRVIDWEYAALADPRIDLALSIDVAGENVLDAVFRYCQRRELSDIDAWV CCCCEEECCCCCEEEEEHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHH SGVQAWRPRTTMMAMLWYLLAYQLWADELYRDQAQQLAQTLQSNQG HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA