| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is yeaZ [H]
Identifier: 147673304
GI number: 147673304
Start: 1693809
End: 1694522
Strand: Reverse
Name: yeaZ [H]
Synonym: VC0395_A1574
Alternate gene names: 147673304
Gene position: 1694522-1693809 (Counterclockwise)
Preceding gene: 147673986
Following gene: 147675166
Centisome position: 56.03
GC content: 53.64
Gene sequence:
>714_bases ATGAGCGTAAAAATTCTCGCCTTAGATACGGCCACCGAGCGCTGTTCCGTCGCGCTACTCGTCGGCAATACCGTTTATTC ACGCAGTGAAATCGCCCCGCGTGATCACACCAAAAAAGTATTGCCTATGGTGGACGAAGTCTTAAAAGAAGCAGGCGTAA CGCTACAAGAATTGGATGCTTTGGCTTTTGGCCGTGGCCCGGGAAGTTTTACTGGGGTACGGATTGGCATTGGAATTGCA CAAGGTTTAGCCTTTGGGGCAGATCTGCCGATGATTGGCATTTCGACCTTAGCGGCGATGGCGCAAGCGGCGTATCGCTT GCAGGGGTTAACCCATGTTGCCAGCGCGATTGATGCGCGCATGGAAGAGGTGTATTGGGGGCGCTATGTGCGTCAAGAAG ATGGCAGTTGGCAAGCCGCGGAAGCGGAGTGTGTGATTGCACCTGCGCTGTTAGCGCAGACCTTGACCCAAGATGATTTA ACCCAAGATGAGCAGATTTGGGCGACCGCCGGAACGGGTTGGGATGCTTATCCCGCACTGGCGGATCTGCCGTTGCAACT GCAAACCAGCGAAGTGCTTTACCCTGATGCGCAAGATATGGCTTATTTGGCTCAGTTCGAATTAGCGCAAGGCAATCAAG TGAGTGTGGAGCAGGCAAGCCCTGTGTATCTGCGCGATACTGTGGCTTGGAAAAAACTGCCGGGTCGCGAGTAA
Upstream 100 bases:
>100_bases TTCTCGCCAGTTTACCGCCAATCCCACGCACGCGGGATCTGGACGTCGTCACCACTTTTCTACAACAATTAGCTATAACT GAAATCAATCAGAGAGACTC
Downstream 100 bases:
>100_bases GGCTAAAACCGTCAGGCAGAAGATGAGCGCTTACTCACTCGCAAACGAATAGGAACAGTATGGTTTCAATTAATGGATTA CCTCCGGCGCGACTGCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MSVKILALDTATERCSVALLVGNTVYSRSEIAPRDHTKKVLPMVDEVLKEAGVTLQELDALAFGRGPGSFTGVRIGIGIA QGLAFGADLPMIGISTLAAMAQAAYRLQGLTHVASAIDARMEEVYWGRYVRQEDGSWQAAEAECVIAPALLAQTLTQDDL TQDEQIWATAGTGWDAYPALADLPLQLQTSEVLYPDAQDMAYLAQFELAQGNQVSVEQASPVYLRDTVAWKKLPGRE
Sequences:
>Translated_237_residues MSVKILALDTATERCSVALLVGNTVYSRSEIAPRDHTKKVLPMVDEVLKEAGVTLQELDALAFGRGPGSFTGVRIGIGIA QGLAFGADLPMIGISTLAAMAQAAYRLQGLTHVASAIDARMEEVYWGRYVRQEDGSWQAAEAECVIAPALLAQTLTQDDL TQDEQIWATAGTGWDAYPALADLPLQLQTSEVLYPDAQDMAYLAQFELAQGNQVSVEQASPVYLRDTVAWKKLPGRE >Mature_236_residues SVKILALDTATERCSVALLVGNTVYSRSEIAPRDHTKKVLPMVDEVLKEAGVTLQELDALAFGRGPGSFTGVRIGIGIAQ GLAFGADLPMIGISTLAAMAQAAYRLQGLTHVASAIDARMEEVYWGRYVRQEDGSWQAAEAECVIAPALLAQTLTQDDLT QDEQIWATAGTGWDAYPALADLPLQLQTSEVLYPDAQDMAYLAQFELAQGNQVSVEQASPVYLRDTVAWKKLPGRE
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M22 family [H]
Homologues:
Organism=Escherichia coli, GI1788109, Length=236, Percent_Identity=54.6610169491525, Blast_Score=254, Evalue=2e-69, Organism=Escherichia coli, GI1789445, Length=112, Percent_Identity=28.5714285714286, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022496 - InterPro: IPR000905 [H]
Pfam domain/function: PF00814 Peptidase_M22 [H]
EC number: NA
Molecular weight: Translated: 25599; Mature: 25468
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVKILALDTATERCSVALLVGNTVYSRSEIAPRDHTKKVLPMVDEVLKEAGVTLQELDA CCEEEEEEECCCCCEEEEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH LAFGRGPGSFTGVRIGIGIAQGLAFGADLPMIGISTLAAMAQAAYRLQGLTHVASAIDAR HHHCCCCCCCCEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MEEVYWGRYVRQEDGSWQAAEAECVIAPALLAQTLTQDDLTQDEQIWATAGTGWDAYPAL HHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHH ADLPLQLQTSEVLYPDAQDMAYLAQFELAQGNQVSVEQASPVYLRDTVAWKKLPGRE HCCCCEEECCCEECCCHHHHHHHHHHHHCCCCEEECCCCCCEEEEHHHHHHCCCCCC >Mature Secondary Structure SVKILALDTATERCSVALLVGNTVYSRSEIAPRDHTKKVLPMVDEVLKEAGVTLQELDA CEEEEEEECCCCCEEEEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH LAFGRGPGSFTGVRIGIGIAQGLAFGADLPMIGISTLAAMAQAAYRLQGLTHVASAIDAR HHHCCCCCCCCEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MEEVYWGRYVRQEDGSWQAAEAECVIAPALLAQTLTQDDLTQDEQIWATAGTGWDAYPAL HHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHH ADLPLQLQTSEVLYPDAQDMAYLAQFELAQGNQVSVEQASPVYLRDTVAWKKLPGRE HCCCCEEECCCEECCCHHHHHHHHHHHHCCCCEEECCCCCCEEEEHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]