| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673169
Identifier: 147673169
GI number: 147673169
Start: 2336842
End: 2337633
Strand: Reverse
Name: 147673169
Synonym: VC0395_A2192
Alternate gene names: NA
Gene position: 2337633-2336842 (Counterclockwise)
Preceding gene: 147675138
Following gene: 147674366
Centisome position: 77.3
GC content: 47.98
Gene sequence:
>792_bases ATGACGCCAACAGCTTTATTCCAATCGCTCTGGAATGATTATATTGAGCGCCTCTGCCCATCGGCAGACAGAGTGCATCA ACTCCTACAAGAAGATGAGCCGCTGATTAATGACCATATTGCGCTGCGCACATTTAATTTGGCGCCACTGGGGTTAGAGA CGCTGGCTAAACCGTTTCTGGCACTCGGCTACCAAGCGTGTGGTGAGTATGAGTTCAAAAGTAAAAAACTCTTTGCTAAG CATTTTGAACATCCCGATCCTTTGCAGCCTAAGGTTTTCATTAGTGAGCTGAAAGTGGAAGAGTGTTCACCTGAGCTGCA AGCGATTGTTGAAAAGCTGGTGGCACAAGTTCAGCCACAAGCATTAGCCAGTGAGGCTTTTTTGTATGGCGGTCGCTTAT GGAGCTTAAGCCATGCCGACTATCTTACTTTGGCGAAAGAGAGTGAGTATGCCGCTTGGCTTGCGGCGCATGGTTATGGT GCAAACCACTTTACAGTCAGCGTGAATCAGCTCAATGCGCTGCATGAAGTGAAACAGGTCAATGACCATCTGCGCCAACA TGGCTTTAGCATCAATGAATCGGGTGGGGAAGTAAAAGGCTCACCAGAAGTCTTGCTCGAACAGTCTTCAACCATGGCTG ATAAAGTGTTAGTGCGTTTTAACGAAGGCGCGGAGATGATCCCCGGTGGCTTTTATGAGTTTGCCAAACGCTACCCTATG GCCAATGGTCAGCTCTATCCCGGATTTGTCGAAGCTTCGGCGGATAAGATTTTTGAAAGCACGAACCGTTAA
Upstream 100 bases:
>100_bases TTCGTCACAGGTTGAAAGCTTTATCGTGTTAGCGCTGGGTAAATTACACGGCGTTTAACCTTAATCCCTTTGCGTTTCTT AGGATCAACAAGGAGGCGTT
Downstream 100 bases:
>100_bases ATCTAACGCATCATACAAATAAAAATAGCCACCGCAGGGTGGCTATTTTTTATAACACGAGACGGGTTATCGGGGCACTT AGCGAGTGCCGTAAACCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MTPTALFQSLWNDYIERLCPSADRVHQLLQEDEPLINDHIALRTFNLAPLGLETLAKPFLALGYQACGEYEFKSKKLFAK HFEHPDPLQPKVFISELKVEECSPELQAIVEKLVAQVQPQALASEAFLYGGRLWSLSHADYLTLAKESEYAAWLAAHGYG ANHFTVSVNQLNALHEVKQVNDHLRQHGFSINESGGEVKGSPEVLLEQSSTMADKVLVRFNEGAEMIPGGFYEFAKRYPM ANGQLYPGFVEASADKIFESTNR
Sequences:
>Translated_263_residues MTPTALFQSLWNDYIERLCPSADRVHQLLQEDEPLINDHIALRTFNLAPLGLETLAKPFLALGYQACGEYEFKSKKLFAK HFEHPDPLQPKVFISELKVEECSPELQAIVEKLVAQVQPQALASEAFLYGGRLWSLSHADYLTLAKESEYAAWLAAHGYG ANHFTVSVNQLNALHEVKQVNDHLRQHGFSINESGGEVKGSPEVLLEQSSTMADKVLVRFNEGAEMIPGGFYEFAKRYPM ANGQLYPGFVEASADKIFESTNR >Mature_262_residues TPTALFQSLWNDYIERLCPSADRVHQLLQEDEPLINDHIALRTFNLAPLGLETLAKPFLALGYQACGEYEFKSKKLFAKH FEHPDPLQPKVFISELKVEECSPELQAIVEKLVAQVQPQALASEAFLYGGRLWSLSHADYLTLAKESEYAAWLAAHGYGA NHFTVSVNQLNALHEVKQVNDHLRQHGFSINESGGEVKGSPEVLLEQSSTMADKVLVRFNEGAEMIPGGFYEFAKRYPMA NGQLYPGFVEASADKIFESTNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29473; Mature: 29341
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPTALFQSLWNDYIERLCPSADRVHQLLQEDEPLINDHIALRTFNLAPLGLETLAKPFL CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHH ALGYQACGEYEFKSKKLFAKHFEHPDPLQPKVFISELKVEECSPELQAIVEKLVAQVQPQ HHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHH ALASEAFLYGGRLWSLSHADYLTLAKESEYAAWLAAHGYGANHFTVSVNQLNALHEVKQV HHHHHHHHHCCEEEEECCCCCEEEECCCCHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHH NDHLRQHGFSINESGGEVKGSPEVLLEQSSTMADKVLVRFNEGAEMIPGGFYEFAKRYPM HHHHHHCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHEECCCCCCCCCHHHHHHHHCCC ANGQLYPGFVEASADKIFESTNR CCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TPTALFQSLWNDYIERLCPSADRVHQLLQEDEPLINDHIALRTFNLAPLGLETLAKPFL CHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHH ALGYQACGEYEFKSKKLFAKHFEHPDPLQPKVFISELKVEECSPELQAIVEKLVAQVQPQ HHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHH ALASEAFLYGGRLWSLSHADYLTLAKESEYAAWLAAHGYGANHFTVSVNQLNALHEVKQV HHHHHHHHHCCEEEEECCCCCEEEECCCCHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHH NDHLRQHGFSINESGGEVKGSPEVLLEQSSTMADKVLVRFNEGAEMIPGGFYEFAKRYPM HHHHHHCCCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHEECCCCCCCCCHHHHHHHHCCC ANGQLYPGFVEASADKIFESTNR CCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA