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The map label for this gene is nspC

Identifier: 147673110

GI number: 147673110

Start: 1296301

End: 1297464

Strand: Reverse

Name: nspC

Synonym: VC0395_A1230

Alternate gene names: NA

Gene position: 1297464-1296301 (Counterclockwise)

Preceding gene: 147675770

Following gene: 147675379

Centisome position: 42.9

GC content: 45.79

Gene sequence:

>1164_bases
ATGGAAACATTGCAGGATATAGGAACAAACATGCTAAAAGACGAATTGAGAACCCCATACTTCATGATTGATGAAGCAAA
ACTCATCGCTAACCTAGAAATTGCTAAGCACCTGAAGGAGATTTCGGGTGTGAAGATGGTGTTGGCACTGAAGTGTTTCT
CAACTTGGGGTGTTTTTGACATCATCAAACCCTATCTGGATGGCACAACCAGTTCGGGTCCGTTTGAAGTAAAACTAGGC
TATGAAACTTTCGGTGGTGAAACTCATGCTTACTCAGTAGGTTACAGTGAAGAGGATGTAAAAGAAGTCATTGATATTTG
TGACAAAATGATCTTCAACTCACAATCGCAACTGGCCGCTTATCGCCATCTTGTGGAAGGCAAAGCATCGCTAGGTTTGC
GTATCAACCCCGGCGTCAGCTATGCAGGTCAAGACCTTGCTAATCCCGCGCGTCAGTTTTCGCGTTTAGGGGTACAGGCC
GATCATATCGATGAAAGTGTCTTCGATTCGATTAATGGCGTGATGTTCCATATGAACTGTGAAAATAAAGACGTTGATGC
CTTTATTGGCTTACTGGATGCCATTTCCGAACGTTTTGGTCGTTATCTCGATAAATTAGACTGGGTGAGTTTAGGTGGGG
GCGTCTTCTTTACTTGGCCAGGTTACGATGTTGAGAAATTGGGCGCAGCACTGAAAGCGTTTGCTGAGCGTCACGCTGTT
CAGCTCTATCTTGAACCGGGTGAGGCGATCATTACCAAAACCACGGATCTTGTGGTGACAGTGGTAGACATTGTGGAAAA
CGGGATGAAAACCGCGATTGTCGATTCCGCAACGGAAGCGCACCGCTTAGATACGCTGATCTATAAAGAGCCTGCATCGG
TGTTGGAAGCCAGTGACAAGGGACAGCACGAATATGTTATTGGCTCTTGTTCTTGCTTAGCGGGCGATCAGTTCTGTGTG
GCTAAGTTTGATGAGCCGCTTCAGGTCGGGCAGAAACTGCATATCCTGGACAGCGCGGGTTACACCATGGTTAAACTCAA
TTGGTTCAATGGCCTGAAAATGCCGTCGGTTTATTGTGAGCGCAAAAATGGTCAAATCCAGAAGATCAACCAGTTTGGCT
ATGAGGATTTCAAACGCACCTTATCTTTATGGTCAATTGAGTAG

Upstream 100 bases:

>100_bases
ACCTGTAACTCCAAGTAGTTTGGGTATAAACAGCTATAACCGAAAGGTTATGGCTGTTTTTCCATTCTTGTTATCGAGAT
ATTTGCCATCACAAGCATGA

Downstream 100 bases:

>100_bases
CGAGTACATATTTTGTCTGGACTCGAAGCGGTGAGGTTAAGCGATTAGGATTACTCACCCTTGATGACGATAGCCAATAA
AAAACAACAAAAAAGCCGTG

Product: carboxynorspermidine decarboxylase

Products: NA

Alternate protein names: Carboxynorspermidine Decarboxylase NspC; Diaminopimelate Decarboxylase; Pyridoxal-Dependent Decarboxylase NspC; LOW QUALITY PROTEIN Orn/DAP/Arg Decarboxylase; Carboxynorspermidine/Carboxyspermidine Decarboxylase; Pyridoxal-Dependent Decarboxylase; Carboxynorspermide Decarboxylase; 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
METLQDIGTNMLKDELRTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPFEVKLG
YETFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRHLVEGKASLGLRINPGVSYAGQDLANPARQFSRLGVQA
DHIDESVFDSINGVMFHMNCENKDVDAFIGLLDAISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAV
QLYLEPGEAIITKTTDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDKGQHEYVIGSCSCLAGDQFCV
AKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERKNGQIQKINQFGYEDFKRTLSLWSIE

Sequences:

>Translated_387_residues
METLQDIGTNMLKDELRTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPFEVKLG
YETFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRHLVEGKASLGLRINPGVSYAGQDLANPARQFSRLGVQA
DHIDESVFDSINGVMFHMNCENKDVDAFIGLLDAISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAV
QLYLEPGEAIITKTTDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDKGQHEYVIGSCSCLAGDQFCV
AKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERKNGQIQKINQFGYEDFKRTLSLWSIE
>Mature_387_residues
METLQDIGTNMLKDELRTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFDIIKPYLDGTTSSGPFEVKLG
YETFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAAYRHLVEGKASLGLRINPGVSYAGQDLANPARQFSRLGVQA
DHIDESVFDSINGVMFHMNCENKDVDAFIGLLDAISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAV
QLYLEPGEAIITKTTDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDKGQHEYVIGSCSCLAGDQFCV
AKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCERKNGQIQKINQFGYEDFKRTLSLWSIE

Specific function: Unknown

COG id: COG0019

COG function: function code E; Diaminopimelate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43100; Mature: 43100

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METLQDIGTNMLKDELRTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFD
CCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHH
IIKPYLDGTTSSGPFEVKLGYETFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAA
HHHHHHCCCCCCCCEEEEECCHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHH
YRHLVEGKASLGLRINPGVSYAGQDLANPARQFSRLGVQADHIDESVFDSINGVMFHMNC
HHHHHCCHHHCCEEECCCCCCCCHHHHHHHHHHHHCCCCHHHCCHHHHHCCCCEEEEEEC
ENKDVDAFIGLLDAISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAV
CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEECCCCCHHHHHHHHHHHHHCCEE
QLYLEPGEAIITKTTDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDK
EEEECCCCEEEEEHHHHHHHHHHHHHCCCCEEHHCCCHHHHHHHHHHHCCCHHHHHCCCC
GQHEYVIGSCSCLAGDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCE
CCCEEEEEEEEEECCCCEEEECCCCHHHHCCEEEEEECCCCEEEEEEECCCCCCCHHHEE
RKNGQIQKINQFGYEDFKRTLSLWSIE
CCCCCCHHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure
METLQDIGTNMLKDELRTPYFMIDEAKLIANLEIAKHLKEISGVKMVLALKCFSTWGVFD
CCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHH
IIKPYLDGTTSSGPFEVKLGYETFGGETHAYSVGYSEEDVKEVIDICDKMIFNSQSQLAA
HHHHHHCCCCCCCCEEEEECCHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHH
YRHLVEGKASLGLRINPGVSYAGQDLANPARQFSRLGVQADHIDESVFDSINGVMFHMNC
HHHHHCCHHHCCEEECCCCCCCCHHHHHHHHHHHHCCCCHHHCCHHHHHCCCCEEEEEEC
ENKDVDAFIGLLDAISERFGRYLDKLDWVSLGGGVFFTWPGYDVEKLGAALKAFAERHAV
CCCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEECCCCCHHHHHHHHHHHHHCCEE
QLYLEPGEAIITKTTDLVVTVVDIVENGMKTAIVDSATEAHRLDTLIYKEPASVLEASDK
EEEECCCCEEEEEHHHHHHHHHHHHHCCCCEEHHCCCHHHHHHHHHHHCCCHHHHHCCCC
GQHEYVIGSCSCLAGDQFCVAKFDEPLQVGQKLHILDSAGYTMVKLNWFNGLKMPSVYCE
CCCEEEEEEEEEECCCCEEEECCCCHHHHCCEEEEEECCCCEEEEEEECCCCCCCHHHEE
RKNGQIQKINQFGYEDFKRTLSLWSIE
CCCCCCHHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA