Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is yaaU [H]

Identifier: 146343708

GI number: 146343708

Start: 7238345

End: 7239859

Strand: Reverse

Name: yaaU [H]

Synonym: BRADO6954

Alternate gene names: 146343708

Gene position: 7239859-7238345 (Counterclockwise)

Preceding gene: 146343709

Following gene: 146343707

Centisome position: 97.09

GC content: 66.2

Gene sequence:

>1515_bases
ATGGCACCCCGGCAGGCATCCTTTCCCCATCTCCGCGTCATCACCTCGACGCCGCAATCCAGCGAAACCGCGCGCGAGCC
GTCGCGCGACGACAACATCATCGAGACCAACATTCCCGCGCGGCTCGATGACCTGCGCTGGAGCGCGTTCCACACCCGCG
TCGTGCTGGCGCTGGGCATCACCTGGGTGCTCGACGGGCTCGAGGTGACGCTTGCCGGCGCGCTGTCGGGCGCGCTGAAG
CAGAGCCCGAGCCTTCACTTCTCCAATCTCGACATCGGGCTCGCCAACAGCGCCTATCTCGCCGGCGCCGTGCTCGGCGC
GCTCGGCTTCGGCTGGCTCACCGACCGCATCGGCCGCCGCAAGCTGTTCTTCATCACGCTGGCACTCTATCTCTCCGCCA
CCGCCGCCACCGCGCTGTCCTGGAACGTCGCGACCTACGCGCTGTTTCGCTTTCTCACCGGCGCCGGAATCGGCGGGGAG
TACACCGCGATCAATTCGACGATCCAGGAGCTGGTGCCGGCGCGCTATCGCGGCTGGACCGATCTCATGATCAACGGCAG
CTTCTGGCTTGGCGCCGCGCTCGGCGCCGTCGGCGCTATCGTCCTGCTGGATCCCGCTTTCGCCGGCCCCGACGTCGGCT
GGCGGCTGGCCTATGGCATCGGCGCCTGTCTCGGTCTCGTCGTGCTGATCATGCGGATGTGGATTCCGGAAAGCCCGCGC
TGGCTGATGATCCATGGCCATCCCGAACAGGCGCATGACATCGTCGTGGCGATCGAGCGCGACGTCACGGGGCACGATCG
CGAAGCGCGCGCGAAAGCTCTGCCCAAGATGAAGCTGCGCATGCGCGACCATACGCCGCTCGGCGAGGTGGCGCGCACGC
TGTTCTCGGTCTATCGCCAGCGCTCCCTCGTCGGCCTCACCTTAATGATCGCGCAAGCGTTCTTCTACAACGCGATCTTT
TTCACCTTCGCGCTGGTGTTGACCGATTTCTACGGCATCAAGTCTGACCATGTCGGCTGGTACATACTGCCTTTCGCAGC
GGGCAATGTGCTCGGGCCGCTGCTGCTCGGCCGTCTGTTCGACACGCTCGGCCGTCGCGCGATGATCACGTTCACCTATG
CCGTGTCCGGTATCTTGCTGGCGTTGACCGGCTACCTGTTCTCGGTCGGCGTGCTCAGTGCGCAAACGCAGACCGCCGCC
TGGATGGTGATCTTCTTCTTCGCCTCGCCGGCGGCGAGCGCCGCCTATCTCACGGTGTCGGAGAACTTTCCGCTGGAGGT
CCGCGCGCTCGCGATCGCTCTGTTCTATGCCATCGGCACCGGCATCGGCGGGGTGGCTGGACCTGCATTGTTCGGCGCGC
TGCTCGATTCAGGCGCACGCGGCGCGGTGTTCGCGGGCTATCTGTTCGGTGCCGGCCTGATGCTGGTCGCTGCGCTCGTC
GCCTGGCGCTATGCGGTGGCGGCGGAGCGCAAATCGCTCGAGCAGGTCGCGCGTCCGCTCGCCGTGATGGAGTAG

Upstream 100 bases:

>100_bases
CGAGACGTTGGGTCGCAGCGGCAGGACATCGCTGCCGCATTTGCTTCATCCTTTCCGGTCAAGCTCTCGGTGCCGTCTCG
CGCCGTCGCAGTGGGATTCC

Downstream 100 bases:

>100_bases
TTGAGAATGCCTGAGAATTCCGACCTGATCGTCCCCGGCGCCGCGGAGCCGGCCGAGATCGTGCCGACGCCCCTGAGCCT
CGTGCCGCATCTGCGCGAGG

Product: major facilitator superfamily (MFS) transporter/sugar transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 504; Mature: 503

Protein sequence:

>504_residues
MAPRQASFPHLRVITSTPQSSETAREPSRDDNIIETNIPARLDDLRWSAFHTRVVLALGITWVLDGLEVTLAGALSGALK
QSPSLHFSNLDIGLANSAYLAGAVLGALGFGWLTDRIGRRKLFFITLALYLSATAATALSWNVATYALFRFLTGAGIGGE
YTAINSTIQELVPARYRGWTDLMINGSFWLGAALGAVGAIVLLDPAFAGPDVGWRLAYGIGACLGLVVLIMRMWIPESPR
WLMIHGHPEQAHDIVVAIERDVTGHDREARAKALPKMKLRMRDHTPLGEVARTLFSVYRQRSLVGLTLMIAQAFFYNAIF
FTFALVLTDFYGIKSDHVGWYILPFAAGNVLGPLLLGRLFDTLGRRAMITFTYAVSGILLALTGYLFSVGVLSAQTQTAA
WMVIFFFASPAASAAYLTVSENFPLEVRALAIALFYAIGTGIGGVAGPALFGALLDSGARGAVFAGYLFGAGLMLVAALV
AWRYAVAAERKSLEQVARPLAVME

Sequences:

>Translated_504_residues
MAPRQASFPHLRVITSTPQSSETAREPSRDDNIIETNIPARLDDLRWSAFHTRVVLALGITWVLDGLEVTLAGALSGALK
QSPSLHFSNLDIGLANSAYLAGAVLGALGFGWLTDRIGRRKLFFITLALYLSATAATALSWNVATYALFRFLTGAGIGGE
YTAINSTIQELVPARYRGWTDLMINGSFWLGAALGAVGAIVLLDPAFAGPDVGWRLAYGIGACLGLVVLIMRMWIPESPR
WLMIHGHPEQAHDIVVAIERDVTGHDREARAKALPKMKLRMRDHTPLGEVARTLFSVYRQRSLVGLTLMIAQAFFYNAIF
FTFALVLTDFYGIKSDHVGWYILPFAAGNVLGPLLLGRLFDTLGRRAMITFTYAVSGILLALTGYLFSVGVLSAQTQTAA
WMVIFFFASPAASAAYLTVSENFPLEVRALAIALFYAIGTGIGGVAGPALFGALLDSGARGAVFAGYLFGAGLMLVAALV
AWRYAVAAERKSLEQVARPLAVME
>Mature_503_residues
APRQASFPHLRVITSTPQSSETAREPSRDDNIIETNIPARLDDLRWSAFHTRVVLALGITWVLDGLEVTLAGALSGALKQ
SPSLHFSNLDIGLANSAYLAGAVLGALGFGWLTDRIGRRKLFFITLALYLSATAATALSWNVATYALFRFLTGAGIGGEY
TAINSTIQELVPARYRGWTDLMINGSFWLGAALGAVGAIVLLDPAFAGPDVGWRLAYGIGACLGLVVLIMRMWIPESPRW
LMIHGHPEQAHDIVVAIERDVTGHDREARAKALPKMKLRMRDHTPLGEVARTLFSVYRQRSLVGLTLMIAQAFFYNAIFF
TFALVLTDFYGIKSDHVGWYILPFAAGNVLGPLLLGRLFDTLGRRAMITFTYAVSGILLALTGYLFSVGVLSAQTQTAAW
MVIFFFASPAASAAYLTVSENFPLEVRALAIALFYAIGTGIGGVAGPALFGALLDSGARGAVFAGYLFGAGLMLVAALVA
WRYAVAAERKSLEQVARPLAVME

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Homo sapiens, GI296080721, Length=272, Percent_Identity=27.9411764705882, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI296080734, Length=266, Percent_Identity=27.8195488721804, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI296080719, Length=272, Percent_Identity=27.9411764705882, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI24497499, Length=272, Percent_Identity=27.9411764705882, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI213021148, Length=522, Percent_Identity=22.7969348659004, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI24497497, Length=378, Percent_Identity=24.8677248677249, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI90669191, Length=378, Percent_Identity=24.8677248677249, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI24308167, Length=500, Percent_Identity=23, Blast_Score=66, Evalue=7e-11,
Organism=Homo sapiens, GI166197673, Length=235, Percent_Identity=27.2340425531915, Blast_Score=66, Evalue=7e-11,
Organism=Escherichia coli, GI1786229, Length=476, Percent_Identity=25.4201680672269, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI87082159, Length=222, Percent_Identity=30.1801801801802, Blast_Score=85, Evalue=9e-18,
Organism=Escherichia coli, GI1788074, Length=453, Percent_Identity=26.7108167770419, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1788068, Length=474, Percent_Identity=24.6835443037975, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1789312, Length=413, Percent_Identity=25.181598062954, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1790550, Length=412, Percent_Identity=25.2427184466019, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87081723, Length=154, Percent_Identity=29.8701298701299, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI32564663, Length=449, Percent_Identity=25.3897550111359, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17565976, Length=310, Percent_Identity=22.5806451612903, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17565978, Length=298, Percent_Identity=23.489932885906, Blast_Score=69, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17543784, Length=371, Percent_Identity=24.7978436657682, Blast_Score=66, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6323653, Length=471, Percent_Identity=24.8407643312102, Blast_Score=78, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6322618, Length=387, Percent_Identity=24.5478036175711, Blast_Score=70, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6320766, Length=389, Percent_Identity=24.9357326478149, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6319956, Length=387, Percent_Identity=24.5478036175711, Blast_Score=69, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6324400, Length=389, Percent_Identity=24.9357326478149, Blast_Score=69, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6323512, Length=169, Percent_Identity=30.7692307692308, Blast_Score=67, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6321886, Length=377, Percent_Identity=23.342175066313, Blast_Score=64, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24649618, Length=368, Percent_Identity=24.4565217391304, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24652793, Length=496, Percent_Identity=23.1854838709677, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24652795, Length=422, Percent_Identity=23.4597156398104, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI221330907, Length=360, Percent_Identity=24.1666666666667, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24640198, Length=440, Percent_Identity=24.0909090909091, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24640196, Length=440, Percent_Identity=24.0909090909091, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24640200, Length=440, Percent_Identity=24.0909090909091, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR005828 [H]

Pfam domain/function: PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 54383; Mature: 54252

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPRQASFPHLRVITSTPQSSETAREPSRDDNIIETNIPARLDDLRWSAFHTRVVLALGI
CCCCCCCCCEEEEEECCCCCCHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
TWVLDGLEVTLAGALSGALKQSPSLHFSNLDIGLANSAYLAGAVLGALGFGWLTDRIGRR
HHHHCCHHHHHHHHHHHHHHCCCCCEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCH
KLFFITLALYLSATAATALSWNVATYALFRFLTGAGIGGEYTAINSTIQELVPARYRGWT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCE
DLMINGSFWLGAALGAVGAIVLLDPAFAGPDVGWRLAYGIGACLGLVVLIMRMWIPESPR
EEEEECCHHHHHHHHHHCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
WLMIHGHPEQAHDIVVAIERDVTGHDREARAKALPKMKLRMRDHTPLGEVARTLFSVYRQ
EEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHH
RSLVGLTLMIAQAFFYNAIFFTFALVLTDFYGIKSDHVGWYILPFAAGNVLGPLLLGRLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHH
DTLGRRAMITFTYAVSGILLALTGYLFSVGVLSAQTQTAAWMVIFFFASPAASAAYLTVS
HHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCCEEEEEEC
ENFPLEVRALAIALFYAIGTGIGGVAGPALFGALLDSGARGAVFAGYLFGAGLMLVAALV
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
AWRYAVAAERKSLEQVARPLAVME
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
APRQASFPHLRVITSTPQSSETAREPSRDDNIIETNIPARLDDLRWSAFHTRVVLALGI
CCCCCCCCEEEEEECCCCCCHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHH
TWVLDGLEVTLAGALSGALKQSPSLHFSNLDIGLANSAYLAGAVLGALGFGWLTDRIGRR
HHHHCCHHHHHHHHHHHHHHCCCCCEECCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCH
KLFFITLALYLSATAATALSWNVATYALFRFLTGAGIGGEYTAINSTIQELVPARYRGWT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCE
DLMINGSFWLGAALGAVGAIVLLDPAFAGPDVGWRLAYGIGACLGLVVLIMRMWIPESPR
EEEEECCHHHHHHHHHHCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
WLMIHGHPEQAHDIVVAIERDVTGHDREARAKALPKMKLRMRDHTPLGEVARTLFSVYRQ
EEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHH
RSLVGLTLMIAQAFFYNAIFFTFALVLTDFYGIKSDHVGWYILPFAAGNVLGPLLLGRLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHH
DTLGRRAMITFTYAVSGILLALTGYLFSVGVLSAQTQTAAWMVIFFFASPAASAAYLTVS
HHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCCEEEEEEC
ENFPLEVRALAIALFYAIGTGIGGVAGPALFGALLDSGARGAVFAGYLFGAGLMLVAALV
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
AWRYAVAAERKSLEQVARPLAVME
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1630901; 9278503 [H]