| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343685
Identifier: 146343685
GI number: 146343685
Start: 7220068
End: 7220772
Strand: Reverse
Name: 146343685
Synonym: BRADO6928
Alternate gene names: NA
Gene position: 7220772-7220068 (Counterclockwise)
Preceding gene: 146343686
Following gene: 146343684
Centisome position: 96.84
GC content: 58.01
Gene sequence:
>705_bases GTGTTGCGCCTCTTCGTTGCGGCAGCAATCGCACTCTCTACCGCGAGTTGCTGGGGTTATGAAAGCTATCGCTACAAGCT GACACTTGCCGTCAACACGCCGGAAGGGATCAAGCGAGCTTCGAGCGTCGTCGAGGTGATGTACGCGGATGTCTGGCTCC CGGAGCGCGGTACCATGCATAAGCTCCGCGGCGAGGCCCTTTATGTTGATCTTGGTGCGGGCCGCAGGCCGCTGATTGCG CTTCTGACATGCGACCTTCACCCGCTCGACAAATCGCAGCGGCGCTGGACTCGCGATGCCGGGCCGGGCGACAATTTGCT TTCCGAACTGTATGGACCAGCGTTGCCGAACCTCCTCGATGATGCAAAGCGTCTTTCGCGGGTGCATGGTGCGCGTCGGA TTACCCCGTCCGACCTGCCGGATCTCGTGACGTTCGCCGATATCAACGATCCGAAGTCGGTGATCGAAGTCGATCCGACC GATCTGACGACTGTGCTCGGCCCAGACATCAGCTGGAACGAGCTAACGCTTGCGATGACCGATGAGCCGATTACGACTGG AATCGAAAGCAAATTGCCGTGGATCCCTGCTTACGAAGTCGGGATGCTCGATGGCGATCCAATCCGCTTCTACAGCAAGA CCTCGCTAGCCAATAAGCTGAGCGTGGCGAACTTCTATGATTCGGTCGAAATCAAACGCAAGTGA
Upstream 100 bases:
>100_bases GCGATGCGAGACTGATACTAATGTTAAAGCTCTTCTCGTTATGAGTACGCAGGGCGCACTCAAGCTGAAGACGGGGCGGG CATGTTAAAAAAAGGCGTCT
Downstream 100 bases:
>100_bases CAAGGGCGGGCAGGTTGGTCGGCTAGACGACATTCGGCGCCGACAGAAGCGGCTTTGTGGCTAAAGCCGGTGCTACGGCG TCAGGCAACGTCGATGATCG
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MLRLFVAAAIALSTASCWGYESYRYKLTLAVNTPEGIKRASSVVEVMYADVWLPERGTMHKLRGEALYVDLGAGRRPLIA LLTCDLHPLDKSQRRWTRDAGPGDNLLSELYGPALPNLLDDAKRLSRVHGARRITPSDLPDLVTFADINDPKSVIEVDPT DLTTVLGPDISWNELTLAMTDEPITTGIESKLPWIPAYEVGMLDGDPIRFYSKTSLANKLSVANFYDSVEIKRK
Sequences:
>Translated_234_residues MLRLFVAAAIALSTASCWGYESYRYKLTLAVNTPEGIKRASSVVEVMYADVWLPERGTMHKLRGEALYVDLGAGRRPLIA LLTCDLHPLDKSQRRWTRDAGPGDNLLSELYGPALPNLLDDAKRLSRVHGARRITPSDLPDLVTFADINDPKSVIEVDPT DLTTVLGPDISWNELTLAMTDEPITTGIESKLPWIPAYEVGMLDGDPIRFYSKTSLANKLSVANFYDSVEIKRK >Mature_234_residues MLRLFVAAAIALSTASCWGYESYRYKLTLAVNTPEGIKRASSVVEVMYADVWLPERGTMHKLRGEALYVDLGAGRRPLIA LLTCDLHPLDKSQRRWTRDAGPGDNLLSELYGPALPNLLDDAKRLSRVHGARRITPSDLPDLVTFADINDPKSVIEVDPT DLTTVLGPDISWNELTLAMTDEPITTGIESKLPWIPAYEVGMLDGDPIRFYSKTSLANKLSVANFYDSVEIKRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25990; Mature: 25990
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLFVAAAIALSTASCWGYESYRYKLTLAVNTPEGIKRASSVVEVMYADVWLPERGTMH CHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHEECCCCCCHH KLRGEALYVDLGAGRRPLIALLTCDLHPLDKSQRRWTRDAGPGDNLLSELYGPALPNLLD HHCCCEEEEECCCCCCCEEEEEEECCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCHHHH DAKRLSRVHGARRITPSDLPDLVTFADINDPKSVIEVDPTDLTTVLGPDISWNELTLAMT HHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCEEEEECCCCCCCEEEEEEE DEPITTGIESKLPWIPAYEVGMLDGDPIRFYSKTSLANKLSVANFYDSVEIKRK CCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEHHHHHHHHHHHHHHCCEEEECC >Mature Secondary Structure MLRLFVAAAIALSTASCWGYESYRYKLTLAVNTPEGIKRASSVVEVMYADVWLPERGTMH CHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHEECCCCCCHH KLRGEALYVDLGAGRRPLIALLTCDLHPLDKSQRRWTRDAGPGDNLLSELYGPALPNLLD HHCCCEEEEECCCCCCCEEEEEEECCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCHHHH DAKRLSRVHGARRITPSDLPDLVTFADINDPKSVIEVDPTDLTTVLGPDISWNELTLAMT HHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCEEEECCCCEEEEECCCCCCCEEEEEEE DEPITTGIESKLPWIPAYEVGMLDGDPIRFYSKTSLANKLSVANFYDSVEIKRK CCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEHHHHHHHHHHHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA