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The map label for this gene is 146343638

Identifier: 146343638

GI number: 146343638

Start: 7145161

End: 7145997

Strand: Reverse

Name: 146343638

Synonym: BRADO6878

Alternate gene names: NA

Gene position: 7145997-7145161 (Counterclockwise)

Preceding gene: 146343639

Following gene: 146343637

Centisome position: 95.83

GC content: 66.67

Gene sequence:

>837_bases
ATGGATGCGAATCCCATGGATGTGAAGACCATGGACGTGACCCGCCGGGAGTCCGGCCATCTCATGCTGATCACGCCCGA
GCGCGTCTTCTACGCCGGGCTGCTCGGCCGACCGCGCCAGCGTTGCTCGGGCGCGTTCCATATCTATGTCGCGCTGACCG
GCAGCCTGCGGCTGTTGCCCGAGGGCGGCGAGGCGCGTTCCGGCGAATTGCTGGTAGTGCCGCCGAACAAGCAGCACACG
ATCGAGAGCGATTACCGTACCGTCATCGTCGTCACCATGGAGCCTGAGAGCGTGCCGATCGGAACGCTCGACCGCTTCGC
AGCCAAGGTCGCGCGCGAGGCCGAGGCCTATGCCTGCCGCATCCGCGCCGCCTATGAGGAGCTGGTGCAGCGGCCGCTCT
CCGGCGACGTCTCCAGCGCGGTGTTCGACCGGCTCTGCTTCGGCGAGGTGCTGCCGCAGCGGACGCTCGATCCGCGCGTG
GTCAAGGCGATCGGGCTGATCAACCGCTTCTCCGGCGAGCCGGCGACGGCGGAGAGCTGCGCCGCAGCCGTGGGGCTGTC
GACCTCGCGCTTCCTGCATCTGTTCAAGGAGGAGACCGACATCTCCTTCCGTTCGTTCCGCGCCTGGAAGCGCGCGCGGC
ACCTGCTCAACTACGCCAACCAGGATCTCAACCTCGCGCATCTCGCGCAGGACATCGGCTATCCCGATTCCACGCATTTC
AGCCACTCGATCCGCCGCTTCTACGGCTTGAAGCCGCGCGCGATCTTCTCCGGCTCGCGCGATCTCGCGATCTATCGCAG
CGGCGAGATCAGCCAGGACATCGCGGTAGCGCGTTGA

Upstream 100 bases:

>100_bases
ACAAAAATCGGCAGTCGTCGCCGATGACAGCGGCGCGAATTGCGCTATGGTTCTTTCCCAAAGAAGCGGCCGACAGAGCC
GCGCCTCAGGAGGAAGACCC

Downstream 100 bases:

>100_bases
CGCAAGCAGATCTGTCGGGGCCTTGCGCATGATGATGGCGGTCGCGTCGCGGCCGTCGTCATCAGTCAAGGTCCTGCATG
AGCAACAAAGCCGTCATCAC

Product: AraC/XylS family transcription factor

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator; Transcriptional Regulator Arac Family; AraC/XylS Family Transcription Factor; Helix-Turn-Helix AraC Domain Protein

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MDANPMDVKTMDVTRRESGHLMLITPERVFYAGLLGRPRQRCSGAFHIYVALTGSLRLLPEGGEARSGELLVVPPNKQHT
IESDYRTVIVVTMEPESVPIGTLDRFAAKVAREAEAYACRIRAAYEELVQRPLSGDVSSAVFDRLCFGEVLPQRTLDPRV
VKAIGLINRFSGEPATAESCAAAVGLSTSRFLHLFKEETDISFRSFRAWKRARHLLNYANQDLNLAHLAQDIGYPDSTHF
SHSIRRFYGLKPRAIFSGSRDLAIYRSGEISQDIAVAR

Sequences:

>Translated_278_residues
MDANPMDVKTMDVTRRESGHLMLITPERVFYAGLLGRPRQRCSGAFHIYVALTGSLRLLPEGGEARSGELLVVPPNKQHT
IESDYRTVIVVTMEPESVPIGTLDRFAAKVAREAEAYACRIRAAYEELVQRPLSGDVSSAVFDRLCFGEVLPQRTLDPRV
VKAIGLINRFSGEPATAESCAAAVGLSTSRFLHLFKEETDISFRSFRAWKRARHLLNYANQDLNLAHLAQDIGYPDSTHF
SHSIRRFYGLKPRAIFSGSRDLAIYRSGEISQDIAVAR
>Mature_278_residues
MDANPMDVKTMDVTRRESGHLMLITPERVFYAGLLGRPRQRCSGAFHIYVALTGSLRLLPEGGEARSGELLVVPPNKQHT
IESDYRTVIVVTMEPESVPIGTLDRFAAKVAREAEAYACRIRAAYEELVQRPLSGDVSSAVFDRLCFGEVLPQRTLDPRV
VKAIGLINRFSGEPATAESCAAAVGLSTSRFLHLFKEETDISFRSFRAWKRARHLLNYANQDLNLAHLAQDIGYPDSTHF
SHSIRRFYGLKPRAIFSGSRDLAIYRSGEISQDIAVAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31010; Mature: 31010

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDANPMDVKTMDVTRRESGHLMLITPERVFYAGLLGRPRQRCSGAFHIYVALTGSLRLLP
CCCCCCCEEEEEEEECCCCCEEEEECHHHHHHHHCCCCHHHHCCEEEEEEEEECCEEEEE
EGGEARSGELLVVPPNKQHTIESDYRTVIVVTMEPESVPIGTLDRFAAKVAREAEAYACR
CCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
IRAAYEELVQRPLSGDVSSAVFDRLCFGEVLPQRTLDPRVVKAIGLINRFSGEPATAESC
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHH
AAAVGLSTSRFLHLFKEETDISFRSFRAWKRARHLLNYANQDLNLAHLAQDIGYPDSTHF
HHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHH
SHSIRRFYGLKPRAIFSGSRDLAIYRSGEISQDIAVAR
HHHHHHHHCCCCCEEECCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MDANPMDVKTMDVTRRESGHLMLITPERVFYAGLLGRPRQRCSGAFHIYVALTGSLRLLP
CCCCCCCEEEEEEEECCCCCEEEEECHHHHHHHHCCCCHHHHCCEEEEEEEEECCEEEEE
EGGEARSGELLVVPPNKQHTIESDYRTVIVVTMEPESVPIGTLDRFAAKVAREAEAYACR
CCCCCCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
IRAAYEELVQRPLSGDVSSAVFDRLCFGEVLPQRTLDPRVVKAIGLINRFSGEPATAESC
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHH
AAAVGLSTSRFLHLFKEETDISFRSFRAWKRARHLLNYANQDLNLAHLAQDIGYPDSTHF
HHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHH
SHSIRRFYGLKPRAIFSGSRDLAIYRSGEISQDIAVAR
HHHHHHHHCCCCCEEECCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA