| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is exuT [H]
Identifier: 146343624
GI number: 146343624
Start: 7127825
End: 7129138
Strand: Reverse
Name: exuT [H]
Synonym: BRADO6863
Alternate gene names: 146343624
Gene position: 7129138-7127825 (Counterclockwise)
Preceding gene: 146343629
Following gene: 146343621
Centisome position: 95.61
GC content: 66.21
Gene sequence:
>1314_bases ATGATGGCCGCGCCAACGACGCTCAAGAGCAATGCCCGCGCCAGCACGGCGTCCACGCCGAAGGGCGCGTGGAGGATCAC CTTCCTTTTGTTTCTGTTCATGCTGGTGAACTTTGCCGACAAGATCGTTGTCGGCCTCGCCGGCGTTCCGATCATGACCG AGCTCAATCTGAGCGCCGAGCAGTTCGGGCTGCTCGGCTCGTCGTTCTTCCTGCTGTTCTCCCTCGCGGCGATCGTGGTC GGCTTCATCGTCAACAAGGTGCCGACGCGCTGGGTCCTCCTGGTGCTGGCGCTGGTGTGGGCGGTGGCGCAATTCCCGAT GGTCGGCACCGTCGGCTTCACGACGCTGCTGATCTGCCGAATCATTCTCGGCGCCGGCGAAGGTCCGGCAGCCTCGGTCG CGGTTCACGCGATCTACAAATGGTTTCCCGACGAGAAGCGCGCGATGCCGACCGCGATCCTGTCGCAGGGCTCCGCGTTC GGCGTCATCCTCGCGGTGCCCGCCTTGAACTGGGTGATCGTGAATCATGGCTGGCACTATGCGTTCGGCGCGCTGGGCGT GGTCGGCCTGATGTGGAGCGCGGCGTGGCTGTGGCTCGGCCGGGAAGGACCGCTGGCGGAGCTGGACCCGGTCGCCGTCC GCGAACAGCGCGTGCCGTATCTGCAGATCCTGACCAGCAGGACCTTCTTGGGTTGCGTGGCGGCGACCTTCGGCGCCTAC TGGGCGCTGTCGCTCGGATTGACCTGGTTCACGCCGTTCCTGATCAAGGGCCTCGGTTTCTCGCAGGCGCAGGCCGGCTT CATCTCGATCCTGCCGTGGATCTTCGGCGCATGCGTGGTGCTGACGACGGGCTTCGCATCGCAGATGCTGATGGCGCGCG GCGTGTCCACGCGCCTGGCGCGCGGTGTGCTCGGTGCGACGCCGCTGGTGATCGGCGGGGCGCTGATGGCCGCGATGCCG CATGTGGACGGGGCGTCGGCCAAGATCGCGCTGGTCGTGGTCGGATCAGGCCTGTGCGGCTCGATCTACGTCGTCTGCCC GCCGATGATCGGCGAGTTCACGCCGGTCGCGCAGCGTGGCGCCGTCATCTCGATCTACGGTGCCCTGTACACGCTGGCCG GCATCATCGCGCCGGTCGTGATGGGCAAGATGATCCAGGCTTCCGGCAGCATGCTCGAAGGCTACATGTCCGGCTTCACC ATCAACGCGGTCATCATGGTGATTTCCGGCCTGCTCGGACTGGCGCTGCTCTGGCCGAACACAGAACGCGCGCGCCTGCA GGTGGATGAGGCGGTCGCGCCGGAATTTGCGTGA
Upstream 100 bases:
>100_bases GGCTTAGTGCGCGATCGGGTTGCGCGCAGCGGCGCTTCGTGGGTAGCATCGACAAAACGCCCGAAGCACAGAGGCGGATC AAAACAAACAACGGGGGTGG
Downstream 100 bases:
>100_bases GGAGTGCGCGCCATCTATTCGGCGTCGTGCCGGCCTTGCGCAGGGACCCATAGCCACCGTCGATCGTGGCTGGGCGGCCT CGATCGACCAAGGTGCCCCA
Product: major facilitator superfamily permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 437; Mature: 437
Protein sequence:
>437_residues MMAAPTTLKSNARASTASTPKGAWRITFLLFLFMLVNFADKIVVGLAGVPIMTELNLSAEQFGLLGSSFFLLFSLAAIVV GFIVNKVPTRWVLLVLALVWAVAQFPMVGTVGFTTLLICRIILGAGEGPAASVAVHAIYKWFPDEKRAMPTAILSQGSAF GVILAVPALNWVIVNHGWHYAFGALGVVGLMWSAAWLWLGREGPLAELDPVAVREQRVPYLQILTSRTFLGCVAATFGAY WALSLGLTWFTPFLIKGLGFSQAQAGFISILPWIFGACVVLTTGFASQMLMARGVSTRLARGVLGATPLVIGGALMAAMP HVDGASAKIALVVVGSGLCGSIYVVCPPMIGEFTPVAQRGAVISIYGALYTLAGIIAPVVMGKMIQASGSMLEGYMSGFT INAVIMVISGLLGLALLWPNTERARLQVDEAVAPEFA
Sequences:
>Translated_437_residues MMAAPTTLKSNARASTASTPKGAWRITFLLFLFMLVNFADKIVVGLAGVPIMTELNLSAEQFGLLGSSFFLLFSLAAIVV GFIVNKVPTRWVLLVLALVWAVAQFPMVGTVGFTTLLICRIILGAGEGPAASVAVHAIYKWFPDEKRAMPTAILSQGSAF GVILAVPALNWVIVNHGWHYAFGALGVVGLMWSAAWLWLGREGPLAELDPVAVREQRVPYLQILTSRTFLGCVAATFGAY WALSLGLTWFTPFLIKGLGFSQAQAGFISILPWIFGACVVLTTGFASQMLMARGVSTRLARGVLGATPLVIGGALMAAMP HVDGASAKIALVVVGSGLCGSIYVVCPPMIGEFTPVAQRGAVISIYGALYTLAGIIAPVVMGKMIQASGSMLEGYMSGFT INAVIMVISGLLGLALLWPNTERARLQVDEAVAPEFA >Mature_437_residues MMAAPTTLKSNARASTASTPKGAWRITFLLFLFMLVNFADKIVVGLAGVPIMTELNLSAEQFGLLGSSFFLLFSLAAIVV GFIVNKVPTRWVLLVLALVWAVAQFPMVGTVGFTTLLICRIILGAGEGPAASVAVHAIYKWFPDEKRAMPTAILSQGSAF GVILAVPALNWVIVNHGWHYAFGALGVVGLMWSAAWLWLGREGPLAELDPVAVREQRVPYLQILTSRTFLGCVAATFGAY WALSLGLTWFTPFLIKGLGFSQAQAGFISILPWIFGACVVLTTGFASQMLMARGVSTRLARGVLGATPLVIGGALMAAMP HVDGASAKIALVVVGSGLCGSIYVVCPPMIGEFTPVAQRGAVISIYGALYTLAGIIAPVVMGKMIQASGSMLEGYMSGFT INAVIMVISGLLGLALLWPNTERARLQVDEAVAPEFA
Specific function: Aldohexuronate transport system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI6912666, Length=345, Percent_Identity=23.4782608695652, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI9945322, Length=360, Percent_Identity=23.0555555555556, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI21322234, Length=383, Percent_Identity=24.0208877284595, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI9966811, Length=360, Percent_Identity=21.6666666666667, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI87082320, Length=385, Percent_Identity=23.3766233766234, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1789515, Length=407, Percent_Identity=24.0786240786241, Blast_Score=105, Evalue=8e-24, Organism=Escherichia coli, GI2367379, Length=289, Percent_Identity=26.9896193771626, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1789152, Length=442, Percent_Identity=21.9457013574661, Blast_Score=92, Evalue=9e-20, Organism=Escherichia coli, GI2367193, Length=283, Percent_Identity=23.321554770318, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17554962, Length=335, Percent_Identity=22.9850746268657, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24648416, Length=281, Percent_Identity=24.9110320284698, Blast_Score=82, Evalue=7e-16, Organism=Drosophila melanogaster, GI21356189, Length=281, Percent_Identity=24.9110320284698, Blast_Score=82, Evalue=7e-16, Organism=Drosophila melanogaster, GI19922400, Length=400, Percent_Identity=25.5, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI24654215, Length=400, Percent_Identity=25.5, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI62484226, Length=352, Percent_Identity=25.5681818181818, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI24583789, Length=371, Percent_Identity=25.6064690026954, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI24584153, Length=364, Percent_Identity=21.978021978022, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI24639764, Length=354, Percent_Identity=23.1638418079096, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46187; Mature: 46187
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAAPTTLKSNARASTASTPKGAWRITFLLFLFMLVNFADKIVVGLAGVPIMTELNLSAE CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHH QFGLLGSSFFLLFSLAAIVVGFIVNKVPTRWVLLVLALVWAVAQFPMVGTVGFTTLLICR HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH IILGAGEGPAASVAVHAIYKWFPDEKRAMPTAILSQGSAFGVILAVPALNWVIVNHGWHY HHHCCCCCCHHHHHHHHHHHHCCCHHHCCCHHHHHCCCCCEEEEEECCCEEEEEECCCHH AFGALGVVGLMWSAAWLWLGREGPLAELDPVAVREQRVPYLQILTSRTFLGCVAATFGAY HHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH WALSLGLTWFTPFLIKGLGFSQAQAGFISILPWIFGACVVLTTGFASQMLMARGVSTRLA HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH RGVLGATPLVIGGALMAAMPHVDGASAKIALVVVGSGLCGSIYVVCPPMIGEFTPVAQRG HHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEECCCHHCCCCCHHHCC AVISIYGALYTLAGIIAPVVMGKMIQASGSMLEGYMSGFTINAVIMVISGLLGLALLWPN CEEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC TERARLQVDEAVAPEFA CCHHHEEEHHHCCCCCC >Mature Secondary Structure MMAAPTTLKSNARASTASTPKGAWRITFLLFLFMLVNFADKIVVGLAGVPIMTELNLSAE CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHH QFGLLGSSFFLLFSLAAIVVGFIVNKVPTRWVLLVLALVWAVAQFPMVGTVGFTTLLICR HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH IILGAGEGPAASVAVHAIYKWFPDEKRAMPTAILSQGSAFGVILAVPALNWVIVNHGWHY HHHCCCCCCHHHHHHHHHHHHCCCHHHCCCHHHHHCCCCCEEEEEECCCEEEEEECCCHH AFGALGVVGLMWSAAWLWLGREGPLAELDPVAVREQRVPYLQILTSRTFLGCVAATFGAY HHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH WALSLGLTWFTPFLIKGLGFSQAQAGFISILPWIFGACVVLTTGFASQMLMARGVSTRLA HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH RGVLGATPLVIGGALMAAMPHVDGASAKIALVVVGSGLCGSIYVVCPPMIGEFTPVAQRG HHHHCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEECCCHHCCCCCHHHCC AVISIYGALYTLAGIIAPVVMGKMIQASGSMLEGYMSGFTINAVIMVISGLLGLALLWPN CEEEHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC TERARLQVDEAVAPEFA CCHHHEEEHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579062; 9384377 [H]