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The map label for this gene is padR [H]

Identifier: 146343495

GI number: 146343495

Start: 6983465

End: 6984052

Strand: Direct

Name: padR [H]

Synonym: BRADO6727

Alternate gene names: 146343495

Gene position: 6983465-6984052 (Clockwise)

Preceding gene: 146343488

Following gene: 146343496

Centisome position: 93.65

GC content: 67.86

Gene sequence:

>588_bases
ATGGCCCTCGGCGACGCCATCCTCGCTTGTCTCACCGAACATCCGATGACGGGCTACGAGCTCGCCAAGACCTTCGACTC
CTCGATCGGCTTCTTCTGGAAGACGGACCACCAGCAGATCTACCGCGAGCTCTCCCGTCTGCGTGACCGCGGCTACATCC
AGGGCCGCGAGGTGGTGCAGACCGGCAAGCCGAACAAGCTCGTCTACACGCTCACGCCGGAGGGCCGCGCCGCCTTCCGC
AGTTGGGCCGCGCGCCCCAGCACGCCGGCCTCGACCAAGGACGATCTTCTCGTCCGGCTCTATGCGCTGGGGGCAGCCGA
CATCGCGCCGATCCGGGCCGACCTGATGGCGCGGATGGAGCATCACCGCGACCGCGCCGAGCGCTACGACCGCATCCTCA
AGAAGCATTACGCGGACGGCAGCGTCGCGCCGGCCGATATGGGCAAGCTGCTCAATCTGCGCCTCGGCTTGCGCCATGAG
CGCATGGTCGCCGAATGGTGCGAGGAGGCGATCACCGCTCTGTCGGCTCTCTCCGGCACCGGCAGCGTGCGGCCGCTGGA
TGCGTCCTCCCGTGAAAGCGCAGGCTGA

Upstream 100 bases:

>100_bases
ACCACCCCATATGCACATTGACGCATATGCGCCAATGTGCATAATGTCAAGCGTGGAGCGGGGCAGACCAAGATCAGAAA
AACGGGAGCAGTTTCCGGCC

Downstream 100 bases:

>100_bases
TCCGCGCGATGCGAAAGCAGTCGCAAAACTTCTGACCGCGCCGGCGGTAAACTTAACCCGTTATTTACCGTAAAAGTCAA
AAGTCGGGACCTGGAGCAGA

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MALGDAILACLTEHPMTGYELAKTFDSSIGFFWKTDHQQIYRELSRLRDRGYIQGREVVQTGKPNKLVYTLTPEGRAAFR
SWAARPSTPASTKDDLLVRLYALGAADIAPIRADLMARMEHHRDRAERYDRILKKHYADGSVAPADMGKLLNLRLGLRHE
RMVAEWCEEAITALSALSGTGSVRPLDASSRESAG

Sequences:

>Translated_195_residues
MALGDAILACLTEHPMTGYELAKTFDSSIGFFWKTDHQQIYRELSRLRDRGYIQGREVVQTGKPNKLVYTLTPEGRAAFR
SWAARPSTPASTKDDLLVRLYALGAADIAPIRADLMARMEHHRDRAERYDRILKKHYADGSVAPADMGKLLNLRLGLRHE
RMVAEWCEEAITALSALSGTGSVRPLDASSRESAG
>Mature_194_residues
ALGDAILACLTEHPMTGYELAKTFDSSIGFFWKTDHQQIYRELSRLRDRGYIQGREVVQTGKPNKLVYTLTPEGRAAFRS
WAARPSTPASTKDDLLVRLYALGAADIAPIRADLMARMEHHRDRAERYDRILKKHYADGSVAPADMGKLLNLRLGLRHER
MVAEWCEEAITALSALSGTGSVRPLDASSRESAG

Specific function: Negative transcriptional regulator of padC phenolic acid decarboxylase [H]

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018309
- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR; PF10400 Vir_act_alpha_C [H]

EC number: NA

Molecular weight: Translated: 21745; Mature: 21614

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALGDAILACLTEHPMTGYELAKTFDSSIGFFWKTDHQQIYRELSRLRDRGYIQGREVVQ
CCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCCCCHHHHH
TGKPNKLVYTLTPEGRAAFRSWAARPSTPASTKDDLLVRLYALGAADIAPIRADLMARME
CCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
HHRDRAERYDRILKKHYADGSVAPADMGKLLNLRLGLRHERMVAEWCEEAITALSALSGT
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
GSVRPLDASSRESAG
CCCCCCCCCCCCCCC
>Mature Secondary Structure 
ALGDAILACLTEHPMTGYELAKTFDSSIGFFWKTDHQQIYRELSRLRDRGYIQGREVVQ
CHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHCCCCCCHHHHH
TGKPNKLVYTLTPEGRAAFRSWAARPSTPASTKDDLLVRLYALGAADIAPIRADLMARME
CCCCCEEEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
HHRDRAERYDRILKKHYADGSVAPADMGKLLNLRLGLRHERMVAEWCEEAITALSALSGT
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
GSVRPLDASSRESAG
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]