| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is proP [H]
Identifier: 146343452
GI number: 146343452
Start: 6945432
End: 6947102
Strand: Direct
Name: proP [H]
Synonym: BRADO6681
Alternate gene names: 146343452
Gene position: 6945432-6947102 (Clockwise)
Preceding gene: 146343449
Following gene: 146343456
Centisome position: 93.14
GC content: 64.15
Gene sequence:
>1671_bases ATGCCAATGTCAACAATGGTCGCCACGCAAGCGAGATCGGGAGGCATGACGAAGGACGAACGCTTCGTCATTCTGGCCTC CTCTCTCGGCACCGTCTTCGAGTGGTACGATTTCTATCTCTACGGTTCGCTGGCCTCGATCATCGGCGCCCAGTTCTTCT CGGCCTATCCCCCGGCCACGCGCGACATCTTCGCGCTGCTCGCCTTCGCCGCCGGCTTCCTGGTGCGCCCCTTCGGCGCC ATCGTGTTCGGCCGGATCGGCGACATCGTCGGCCGCAAATACACCTTCCTGGTCACGATCCTGATCATGGGCCTGTCGAC CTTCATCGTTGGCCTGCTGCCGAACGCCGAGACGATCGGCTTCGCCGCGCCGGTGATCCTGATCTCGCTGCGCCTGCTGC AGGGCCTCGCGCTCGGCGGTGAATATGGCGGCGCCGCGACCTACGTCGCCGAGCACGCGCCGAACGGCAAGCGCGGCTAC TACACCTCCTTCATCCAGACCACCGCGACGCTGGGCCTGTTTCTCTCGCTGCTGGTGATCCTGTTTACCCGCACCATCAT CGGCGAGGCGGACTTCGCCAAGTGGGGCTGGCGCGTTCCGTTCCTGGTCTCGGTGCTGCTGCTCGGCGTTTCGCTCTGGA TCCGCCTGCGGCTCAACGAGTCGCCGGTCTTCCAGAAGATGAAGGAAGAGGGCAAGAGCTCGAAGGCGCCGCTGACGGAA GCCTTCGCCAATTGGAGCAATGCCAAGATCGTTCTGCTGGCGCTGATCGGCGGCACCATGGGCCAGGGCGTGGTCTGGTA CACCGGCCAGTTCTACGCGCTGTTCTTCCTGCAATCGATCCTGAAGGTCGACGGCTACACCGCCAACCTCTTGATCGCCT GGTCGCTGCTGCTCGGCACCGGGTTCTTCGTGATCTTCGGCATGCTGTCGGACAAGATCGGCCGCAAGCCGATCATCATG GGCGGTTGCCTGATCGCGGCGCTGACCTTCTTCCCGATCTTCAAGATGATCACCAGCAACGCCAACCCGGCGCTGGAGAA GGCGATCGAGTCGGTGAAGGTGGAAGTGGTGGCCGATCCCGCCGGCTGCGGCGACCTGTTCAACCCGGTCGGCACCCGCG TCTTCACCCAGCCCTGCGACACCGCCCGCGCCTACCTGTCCCAGCAGTCGGTGAAGTACTCGACGACCTCGGGTCCGGCT GGCTCCGGCGTGAAGGTGACCGTCAACGGCACGGACGTGCCTTATGCTGACGCCAAGGCCGGCAATCCCGCGGTCCTCGC GGCCGTTCAGGCCGCCGGCTATCCGAAGGCCGGCGACGCCGCGATCGTGAAGATGTCGAACCCCTTCGACATCTTCCGTC CGCAGGTCGCCGCCATCATCGGCCTGCTGTTCATCCTGGTGATCTTCGTGACCATGGTCTACGGCCCGATCGCCGCGATG CTGGTCGAGTTGTTCCCGACCAAGATCCGCTACACCTCGATGTCGCTGCCCTATCACATCGGCAACGGCTGGTTCGGCGG CCTGCTGCCGGCAACCGCCTTCGCGATCGTGGCCTCGACCGGCGATATCTACGCCGGCCTGTGGTACCCGGTCGTATTCG CCGTGATCACTGCGATCGTCGGCTTCGTCTTCCTGCCGGAGACGAAGGACGTCAACATCCAGGACCATTGA
Upstream 100 bases:
>100_bases TCACTGCGATGTTATCGAAGGCGCAAGGTCTCCGCGATCTCTCGCCGTCCAAGTCCGGCATGCGGAGGCGAAACCATCAT AGCAACAACTTGGGGAGCGA
Downstream 100 bases:
>100_bases GGTCTCTGTCACGATGCGAGCGGCACCCGCTCGCATCCACCTCGAGCGAACGGCCGCGGATCACTCCGCGGCCGTTCGGC GTTTCAAGCCAGAGGTTTTG
Product: MFS family sugar transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: Proline porter II; PPII [H]
Number of amino acids: Translated: 556; Mature: 555
Protein sequence:
>556_residues MPMSTMVATQARSGGMTKDERFVILASSLGTVFEWYDFYLYGSLASIIGAQFFSAYPPATRDIFALLAFAAGFLVRPFGA IVFGRIGDIVGRKYTFLVTILIMGLSTFIVGLLPNAETIGFAAPVILISLRLLQGLALGGEYGGAATYVAEHAPNGKRGY YTSFIQTTATLGLFLSLLVILFTRTIIGEADFAKWGWRVPFLVSVLLLGVSLWIRLRLNESPVFQKMKEEGKSSKAPLTE AFANWSNAKIVLLALIGGTMGQGVVWYTGQFYALFFLQSILKVDGYTANLLIAWSLLLGTGFFVIFGMLSDKIGRKPIIM GGCLIAALTFFPIFKMITSNANPALEKAIESVKVEVVADPAGCGDLFNPVGTRVFTQPCDTARAYLSQQSVKYSTTSGPA GSGVKVTVNGTDVPYADAKAGNPAVLAAVQAAGYPKAGDAAIVKMSNPFDIFRPQVAAIIGLLFILVIFVTMVYGPIAAM LVELFPTKIRYTSMSLPYHIGNGWFGGLLPATAFAIVASTGDIYAGLWYPVVFAVITAIVGFVFLPETKDVNIQDH
Sequences:
>Translated_556_residues MPMSTMVATQARSGGMTKDERFVILASSLGTVFEWYDFYLYGSLASIIGAQFFSAYPPATRDIFALLAFAAGFLVRPFGA IVFGRIGDIVGRKYTFLVTILIMGLSTFIVGLLPNAETIGFAAPVILISLRLLQGLALGGEYGGAATYVAEHAPNGKRGY YTSFIQTTATLGLFLSLLVILFTRTIIGEADFAKWGWRVPFLVSVLLLGVSLWIRLRLNESPVFQKMKEEGKSSKAPLTE AFANWSNAKIVLLALIGGTMGQGVVWYTGQFYALFFLQSILKVDGYTANLLIAWSLLLGTGFFVIFGMLSDKIGRKPIIM GGCLIAALTFFPIFKMITSNANPALEKAIESVKVEVVADPAGCGDLFNPVGTRVFTQPCDTARAYLSQQSVKYSTTSGPA GSGVKVTVNGTDVPYADAKAGNPAVLAAVQAAGYPKAGDAAIVKMSNPFDIFRPQVAAIIGLLFILVIFVTMVYGPIAAM LVELFPTKIRYTSMSLPYHIGNGWFGGLLPATAFAIVASTGDIYAGLWYPVVFAVITAIVGFVFLPETKDVNIQDH >Mature_555_residues PMSTMVATQARSGGMTKDERFVILASSLGTVFEWYDFYLYGSLASIIGAQFFSAYPPATRDIFALLAFAAGFLVRPFGAI VFGRIGDIVGRKYTFLVTILIMGLSTFIVGLLPNAETIGFAAPVILISLRLLQGLALGGEYGGAATYVAEHAPNGKRGYY TSFIQTTATLGLFLSLLVILFTRTIIGEADFAKWGWRVPFLVSVLLLGVSLWIRLRLNESPVFQKMKEEGKSSKAPLTEA FANWSNAKIVLLALIGGTMGQGVVWYTGQFYALFFLQSILKVDGYTANLLIAWSLLLGTGFFVIFGMLSDKIGRKPIIMG GCLIAALTFFPIFKMITSNANPALEKAIESVKVEVVADPAGCGDLFNPVGTRVFTQPCDTARAYLSQQSVKYSTTSGPAG SGVKVTVNGTDVPYADAKAGNPAVLAAVQAAGYPKAGDAAIVKMSNPFDIFRPQVAAIIGLLFILVIFVTMVYGPIAAML VELFPTKIRYTSMSLPYHIGNGWFGGLLPATAFAIVASTGDIYAGLWYPVVFAVITAIVGFVFLPETKDVNIQDH
Specific function: Proton symporter that senses osmotic shifts and responds by importing osmolytes such as proline, glycine betaine, stachydrine, pipecolic acid, ectoine and taurine. It is both an osmosensor and an osmoregulator which is available to participate early in th
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=333, Percent_Identity=35.7357357357357, Blast_Score=199, Evalue=4e-52, Organism=Escherichia coli, GI1788292, Length=351, Percent_Identity=33.048433048433, Blast_Score=192, Evalue=3e-50, Organism=Escherichia coli, GI1788942, Length=349, Percent_Identity=32.378223495702, Blast_Score=155, Evalue=5e-39, Organism=Escherichia coli, GI1789941, Length=338, Percent_Identity=35.5029585798817, Blast_Score=146, Evalue=3e-36, Organism=Escherichia coli, GI87082404, Length=327, Percent_Identity=24.4648318042813, Blast_Score=73, Evalue=6e-14, Organism=Escherichia coli, GI87082231, Length=208, Percent_Identity=26.9230769230769, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR015041 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF08946 Osmo_CC; PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 59733; Mature: 59602
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMSTMVATQARSGGMTKDERFVILASSLGTVFEWYDFYLYGSLASIIGAQFFSAYPPAT CCCHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH RDIFALLAFAAGFLVRPFGAIVFGRIGDIVGRKYTFLVTILIMGLSTFIVGLLPNAETIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH FAAPVILISLRLLQGLALGGEYGGAATYVAEHAPNGKRGYYTSFIQTTATLGLFLSLLVI HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LFTRTIIGEADFAKWGWRVPFLVSVLLLGVSLWIRLRLNESPVFQKMKEEGKSSKAPLTE HHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHCCCCCCCHHH AFANWSNAKIVLLALIGGTMGQGVVWYTGQFYALFFLQSILKVDGYTANLLIAWSLLLGT HHCCCCCCCEEEEEECCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH GFFVIFGMLSDKIGRKPIIMGGCLIAALTFFPIFKMITSNANPALEKAIESVKVEVVADP HHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEEECC AGCGDLFNPVGTRVFTQPCDTARAYLSQQSVKYSTTSGPAGSGVKVTVNGTDVPYADAKA CCCCHHHHHHCCHHCCCCHHHHHHHHHHCCCEEECCCCCCCCCEEEEECCCCCCCCCCCC GNPAVLAAVQAAGYPKAGDAAIVKMSNPFDIFRPQVAAIIGLLFILVIFVTMVYGPIAAM CCCHHEEEHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVELFPTKIRYTSMSLPYHIGNGWFGGLLPATAFAIVASTGDIYAGLWYPVVFAVITAIV HHHHCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH GFVFLPETKDVNIQDH HHEECCCCCCCCCCCC >Mature Secondary Structure PMSTMVATQARSGGMTKDERFVILASSLGTVFEWYDFYLYGSLASIIGAQFFSAYPPAT CCHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH RDIFALLAFAAGFLVRPFGAIVFGRIGDIVGRKYTFLVTILIMGLSTFIVGLLPNAETIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH FAAPVILISLRLLQGLALGGEYGGAATYVAEHAPNGKRGYYTSFIQTTATLGLFLSLLVI HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH LFTRTIIGEADFAKWGWRVPFLVSVLLLGVSLWIRLRLNESPVFQKMKEEGKSSKAPLTE HHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHCCCCCCCHHH AFANWSNAKIVLLALIGGTMGQGVVWYTGQFYALFFLQSILKVDGYTANLLIAWSLLLGT HHCCCCCCCEEEEEECCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH GFFVIFGMLSDKIGRKPIIMGGCLIAALTFFPIFKMITSNANPALEKAIESVKVEVVADP HHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEEECC AGCGDLFNPVGTRVFTQPCDTARAYLSQQSVKYSTTSGPAGSGVKVTVNGTDVPYADAKA CCCCHHHHHHCCHHCCCCHHHHHHHHHHCCCEEECCCCCCCCCEEEEECCCCCCCCCCCC GNPAVLAAVQAAGYPKAGDAAIVKMSNPFDIFRPQVAAIIGLLFILVIFVTMVYGPIAAM CCCHHEEEHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVELFPTKIRYTSMSLPYHIGNGWFGGLLPATAFAIVASTGDIYAGLWYPVVFAVITAIV HHHHCCCCEEEEEECCCEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH GFVFLPETKDVNIQDH HHEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]