| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is ubiG [H]
Identifier: 146343398
GI number: 146343398
Start: 6877225
End: 6878007
Strand: Direct
Name: ubiG [H]
Synonym: BRADO6627
Alternate gene names: 146343398
Gene position: 6877225-6878007 (Clockwise)
Preceding gene: 146343397
Following gene: 146343402
Centisome position: 92.23
GC content: 70.11
Gene sequence:
>783_bases ATGCTCTACAAGGATGCCGTGAAGCCCGCTTTCGCCGCGACCGCCGAGGGCCCCTCCACCATCGATCCCGCCGAGATCGC GCGGTTCTCGCGTCTGGCCGAGGAATGGTGGAAGCCGGACGGCGCGTTCAAGCTGGTGCACGCCTTCAACGCCGCGCGCG TGCGCTACCTCTGCGATCGCCTGCCCGCGCTGGTCGGCCGCGACGCCGGAGCGAACCTGCCGCTGGCCGGCCTCGACATC ATCGACGTCGGCTGCGGCGCCGGCATCGTCACCGAGCCGTTGTCGCGGCTCGGTGCCGAGACCCTGGGCATCGATGCCGC CGAGCGCAACGTGCTGGTCGCCGCCGACCACGCTCGCAGGCAGGGCGCGCTCGTTTCCTACCGCCACGCGCTGCCGGAGG ATCTCGCCGCCGAAGGCGAGCAGGCCGACATCGTGCTGACGCTCGAAGTGGTCGAGCACGTCGCCGATCTCGCCCGCTTC GTCGGCCATGTCGCCGACCTCGTGCGTCCCGGCGGCCTGCTCGTGATCGGCACCTTGAACCGCACGCCGATCTCGTTCGT GAAGGCGATCATCGGCGCCGAATACATCCTCGGCTGGCTGCCGCGCGGCACGCATGACTGGCGCCGGTTCGTGAAGCCTT CGGAGCTGCGGACGCTGCTCGCGCCGCGTCGCTTCATTCCGGTGGAGACGGTGGCCGTCGAGTTGAACCCGCTGACGATG CGCTGGCGCATCGGCGGCCGCCCCTCGACCAACTACCTGCAGATCTACCGCCGCATGCCGTGA
Upstream 100 bases:
>100_bases CATGGCGCCTCGGTCGTGCTCACCCTGATCCATATCGTGCTGAGCGCCGCCGTGCTGCTGCGCCTCGCGCAGTAGCGCCG TCGGCGGAGAAAGGACGACG
Downstream 100 bases:
>100_bases GGGCGCGCGCTGCTTGCGAAGCCCGGCAGTCGCGTCACGACGGCTCCGGGACATCCTCCCTGGCACCGGCATGCTGCTCG GCCGGCGCCAGGAAGCTGGC
Product: bifunctional 3-demethylubiquinone-9 3-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MLYKDAVKPAFAATAEGPSTIDPAEIARFSRLAEEWWKPDGAFKLVHAFNAARVRYLCDRLPALVGRDAGANLPLAGLDI IDVGCGAGIVTEPLSRLGAETLGIDAAERNVLVAADHARRQGALVSYRHALPEDLAAEGEQADIVLTLEVVEHVADLARF VGHVADLVRPGGLLVIGTLNRTPISFVKAIIGAEYILGWLPRGTHDWRRFVKPSELRTLLAPRRFIPVETVAVELNPLTM RWRIGGRPSTNYLQIYRRMP
Sequences:
>Translated_260_residues MLYKDAVKPAFAATAEGPSTIDPAEIARFSRLAEEWWKPDGAFKLVHAFNAARVRYLCDRLPALVGRDAGANLPLAGLDI IDVGCGAGIVTEPLSRLGAETLGIDAAERNVLVAADHARRQGALVSYRHALPEDLAAEGEQADIVLTLEVVEHVADLARF VGHVADLVRPGGLLVIGTLNRTPISFVKAIIGAEYILGWLPRGTHDWRRFVKPSELRTLLAPRRFIPVETVAVELNPLTM RWRIGGRPSTNYLQIYRRMP >Mature_260_residues MLYKDAVKPAFAATAEGPSTIDPAEIARFSRLAEEWWKPDGAFKLVHAFNAARVRYLCDRLPALVGRDAGANLPLAGLDI IDVGCGAGIVTEPLSRLGAETLGIDAAERNVLVAADHARRQGALVSYRHALPEDLAAEGEQADIVLTLEVVEHVADLARF VGHVADLVRPGGLLVIGTLNRTPISFVKAIIGAEYILGWLPRGTHDWRRFVKPSELRTLLAPRRFIPVETVAVELNPLTM RWRIGGRPSTNYLQIYRRMP
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family [H]
Homologues:
Organism=Homo sapiens, GI118600965, Length=238, Percent_Identity=35.7142857142857, Blast_Score=160, Evalue=1e-39, Organism=Escherichia coli, GI1788564, Length=235, Percent_Identity=35.3191489361702, Blast_Score=153, Evalue=1e-38, Organism=Caenorhabditis elegans, GI115533050, Length=242, Percent_Identity=31.8181818181818, Blast_Score=116, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6324476, Length=229, Percent_Identity=27.0742358078603, Blast_Score=99, Evalue=9e-22, Organism=Drosophila melanogaster, GI24585589, Length=227, Percent_Identity=31.2775330396476, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI281365311, Length=220, Percent_Identity=31.3636363636364, Blast_Score=115, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR010233 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.64 [H]
Molecular weight: Translated: 28494; Mature: 28494
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYKDAVKPAFAATAEGPSTIDPAEIARFSRLAEEWWKPDGAFKLVHAFNAARVRYLCDR CCCHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LPALVGRDAGANLPLAGLDIIDVGCGAGIVTEPLSRLGAETLGIDAAERNVLVAADHARR HHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCHHHHCCCHHHCCEEEEECCHHH QGALVSYRHALPEDLAAEGEQADIVLTLEVVEHVADLARFVGHVADLVRPGGLLVIGTLN CCCHHHHHHHCCHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC RTPISFVKAIIGAEYILGWLPRGTHDWRRFVKPSELRTLLAPRRFIPVETVAVELNPLTM CCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHCCCCCCCEEEEEEEECCEEE RWRIGGRPSTNYLQIYRRMP EEEECCCCCCHHHHHEECCC >Mature Secondary Structure MLYKDAVKPAFAATAEGPSTIDPAEIARFSRLAEEWWKPDGAFKLVHAFNAARVRYLCDR CCCHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LPALVGRDAGANLPLAGLDIIDVGCGAGIVTEPLSRLGAETLGIDAAERNVLVAADHARR HHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCHHHHCCCHHHCCEEEEECCHHH QGALVSYRHALPEDLAAEGEQADIVLTLEVVEHVADLARFVGHVADLVRPGGLLVIGTLN CCCHHHHHHHCCHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCC RTPISFVKAIIGAEYILGWLPRGTHDWRRFVKPSELRTLLAPRRFIPVETVAVELNPLTM CCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHCCCCCCCEEEEEEEECCEEE RWRIGGRPSTNYLQIYRRMP EEEECCCCCCHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA