| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is flgC [C]
Identifier: 146343395
GI number: 146343395
Start: 6875478
End: 6875888
Strand: Direct
Name: flgC [C]
Synonym: BRADO6624
Alternate gene names: 146343395
Gene position: 6875478-6875888 (Clockwise)
Preceding gene: 146343394
Following gene: 146343396
Centisome position: 92.21
GC content: 67.4
Gene sequence:
>411_bases ATGAGCCCCATCGCCTCCAACGCAGTCTCCGGGATGAACGCGGCCGCGCGCCGCCTCGAAGTGTCGGCGTCGAACGTCGC CAATGCCAGGAGCACGGGCGCGCTGCCGGATACGAACGGCAATGTGCCGGCGGGCGCGCCGAAGGCCTATGATCCGCTCG AACTGGTGCAGAGCGACGTCGCGGGCGGCGGCACGCAGACGACGATCGCCAAGGCCGGCAATGGCACCTCGGCGAGCTAC GACCCCACGGCGCCGTTCGCCAACAAGGAAGGCCTCGTCGCCGCGCCTCGGGTCGACCTGGCGCAAGAGATGATCAGCCA GCTCGTCGCCAAATACAGCTTCGCCGCCAATGCGCGCGTGCTCAAGGCCAGCGACGAGATGAGTCGGATCGTGATCGACA TGAAGGTCTGA
Upstream 100 bases:
>100_bases ACCCAACGCCGCATGGTGAACAAAACCTTGCACCGCTAGCTTGAAATCGCCCGCCGGCCTTGACGCTTGCTTCGCAGGCT CCGCGCTTAGCTGCCATCCC
Downstream 100 bases:
>100_bases CCTTCCTCGATCTGCATTGCCCGAGCGGCTCTCCGTCCTCGCCTCTCACGCATCCGTGATATCCTGTTGAAATCCGCGCG ACGGCGGGCGGCGTAGCGGC
Product: putative flagellar basal-body rod protein (flgC)
Products: NA
Alternate protein names: Flagellar Basal-Body Rod Protein FlgC
Number of amino acids: Translated: 136; Mature: 135
Protein sequence:
>136_residues MSPIASNAVSGMNAAARRLEVSASNVANARSTGALPDTNGNVPAGAPKAYDPLELVQSDVAGGGTQTTIAKAGNGTSASY DPTAPFANKEGLVAAPRVDLAQEMISQLVAKYSFAANARVLKASDEMSRIVIDMKV
Sequences:
>Translated_136_residues MSPIASNAVSGMNAAARRLEVSASNVANARSTGALPDTNGNVPAGAPKAYDPLELVQSDVAGGGTQTTIAKAGNGTSASY DPTAPFANKEGLVAAPRVDLAQEMISQLVAKYSFAANARVLKASDEMSRIVIDMKV >Mature_135_residues SPIASNAVSGMNAAARRLEVSASNVANARSTGALPDTNGNVPAGAPKAYDPLELVQSDVAGGGTQTTIAKAGNGTSASYD PTAPFANKEGLVAAPRVDLAQEMISQLVAKYSFAANARVLKASDEMSRIVIDMKV
Specific function: Unknown
COG id: COG1558
COG function: function code N; Flagellar basal body rod protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13851; Mature: 13719
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPIASNAVSGMNAAARRLEVSASNVANARSTGALPDTNGNVPAGAPKAYDPLELVQSDV CCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH AGGGTQTTIAKAGNGTSASYDPTAPFANKEGLVAAPRVDLAQEMISQLVAKYSFAANARV CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCEE LKASDEMSRIVIDMKV EECCCCCEEEEEEECC >Mature Secondary Structure SPIASNAVSGMNAAARRLEVSASNVANARSTGALPDTNGNVPAGAPKAYDPLELVQSDV CCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH AGGGTQTTIAKAGNGTSASYDPTAPFANKEGLVAAPRVDLAQEMISQLVAKYSFAANARV CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCEE LKASDEMSRIVIDMKV EECCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA