| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is ucpA [C]
Identifier: 146343332
GI number: 146343332
Start: 6807657
End: 6808574
Strand: Direct
Name: ucpA [C]
Synonym: BRADO6558
Alternate gene names: 146343332
Gene position: 6807657-6808574 (Clockwise)
Preceding gene: 146343330
Following gene: 146343333
Centisome position: 91.3
GC content: 70.48
Gene sequence:
>918_bases ATGACCGACGCACCCTCAACCCCCGTGCGGTCTCGACGCTATGCGCTGGCGGGATTCGCCGGCGGCCTCGCCGCGGGCGC GCTCGGCGGCGCCGCATTCGCCCAGACGGCGCACCGGCCGGCGCCCACCATCATTGCGGCCCCGAAACGGTTCGGCGGCA AGACCGTGCTCGTCACCGGGGCCACCTCGGGAATCGGACGCGCCGCCGCGATCGCCTTTGCCCGCCAGGGCGCGGCAGTC GTGTTCTGCGGCCGGCGCGAGGCGCTGGGCCGCGAGGTCGAGGCCGAGATCAAGGCGGAGGGTGGCCGCGCCCGCTTCAT CCGCGCCGATGTCCGCGTCGAGGCCGAGATGCGGGATCTCGTGGTACAGGCGATTGCAACGTTCGGCGGTCTCGACATCG CGTTGAACAATGCCGGCATCACGATCGAAAAGCCGCTGCACGAGCTCGATGCTGCCGACTGGGCCGATGTCGTCGACACC AACCTGCGCGGCGTGTTCTTCGCCATGAAGTATGAAATCGCCGAGATGCTGCCGCGCGGCGGCGGGACCATTCTCGTGAC CTCGTCCTCCGTCGTCCATCGCACCGGGCCGCGCCGCAGCGCCTACACCGCGACCAAGGCCGGCTTGGTCGGCATGGTGC GGTCGGCGGCGCTCGACTATGCCGACAACAACATCCGCATCAACGCGATCCTGCCGGGCACGACCGACACCGCGCTGGTC CGCCGCGTCGCCGGCACCGAGGGCATGCCGGACGCCGTGTGGCAGATCGCCGCCACGCAATGGGCGCGGAGCAAGATGCC GGGCTTCAAGCGCATGGCGTCGCCCGAAGAGATCGCCGAGTTCGCTGTCGCCATGGCCTCGCCGGAGCTGACCTACATGA CCGGCTCTGCGCTCGCGTCGGATGGCGGGACCGGCTGA
Upstream 100 bases:
>100_bases GCGGGCATTTTCGTCATTTCAATCGATGTTGACACTGATCATATTTAGCCTAGGATGATGTTATCATCGTTCACATCGGA TCTGAACCGGAGATGATGCC
Downstream 100 bases:
>100_bases GATTTTATCGGGCCCAGGAAACCTTCCGTCGCGCTGGCGATTGCCGAACAGAGATTGTCATGCGGGACTGACGCGACTGC ACGTCGTGCGGCCCTCACGC
Product: putative short-chain dehydrogenases/reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MTDAPSTPVRSRRYALAGFAGGLAAGALGGAAFAQTAHRPAPTIIAAPKRFGGKTVLVTGATSGIGRAAAIAFARQGAAV VFCGRREALGREVEAEIKAEGGRARFIRADVRVEAEMRDLVVQAIATFGGLDIALNNAGITIEKPLHELDAADWADVVDT NLRGVFFAMKYEIAEMLPRGGGTILVTSSSVVHRTGPRRSAYTATKAGLVGMVRSAALDYADNNIRINAILPGTTDTALV RRVAGTEGMPDAVWQIAATQWARSKMPGFKRMASPEEIAEFAVAMASPELTYMTGSALASDGGTG
Sequences:
>Translated_305_residues MTDAPSTPVRSRRYALAGFAGGLAAGALGGAAFAQTAHRPAPTIIAAPKRFGGKTVLVTGATSGIGRAAAIAFARQGAAV VFCGRREALGREVEAEIKAEGGRARFIRADVRVEAEMRDLVVQAIATFGGLDIALNNAGITIEKPLHELDAADWADVVDT NLRGVFFAMKYEIAEMLPRGGGTILVTSSSVVHRTGPRRSAYTATKAGLVGMVRSAALDYADNNIRINAILPGTTDTALV RRVAGTEGMPDAVWQIAATQWARSKMPGFKRMASPEEIAEFAVAMASPELTYMTGSALASDGGTG >Mature_304_residues TDAPSTPVRSRRYALAGFAGGLAAGALGGAAFAQTAHRPAPTIIAAPKRFGGKTVLVTGATSGIGRAAAIAFARQGAAVV FCGRREALGREVEAEIKAEGGRARFIRADVRVEAEMRDLVVQAIATFGGLDIALNNAGITIEKPLHELDAADWADVVDTN LRGVFFAMKYEIAEMLPRGGGTILVTSSSVVHRTGPRRSAYTATKAGLVGMVRSAALDYADNNIRINAILPGTTDTALVR RVAGTEGMPDAVWQIAATQWARSKMPGFKRMASPEEIAEFAVAMASPELTYMTGSALASDGGTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=281, Percent_Identity=27.4021352313167, Blast_Score=107, Evalue=2e-23, Organism=Homo sapiens, GI19923817, Length=268, Percent_Identity=26.865671641791, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI66933014, Length=255, Percent_Identity=31.7647058823529, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI15277342, Length=257, Percent_Identity=29.1828793774319, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI31542939, Length=208, Percent_Identity=32.6923076923077, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI4504505, Length=197, Percent_Identity=34.010152284264, Blast_Score=95, Evalue=9e-20, Organism=Homo sapiens, GI4758504, Length=269, Percent_Identity=29.7397769516729, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI10190704, Length=267, Percent_Identity=28.4644194756554, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI59889578, Length=257, Percent_Identity=33.852140077821, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI5031737, Length=257, Percent_Identity=27.2373540856031, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI126723191, Length=204, Percent_Identity=28.921568627451, Blast_Score=82, Evalue=8e-16, Organism=Homo sapiens, GI126723750, Length=257, Percent_Identity=26.4591439688716, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI209862901, Length=272, Percent_Identity=29.4117647058824, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI19923983, Length=272, Percent_Identity=29.4117647058824, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI224922801, Length=174, Percent_Identity=32.7586206896552, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI83715985, Length=269, Percent_Identity=28.2527881040892, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI33667109, Length=205, Percent_Identity=30.7317073170732, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI40254992, Length=254, Percent_Identity=27.5590551181102, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI40254986, Length=201, Percent_Identity=32.8358208955224, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI109715829, Length=247, Percent_Identity=27.9352226720648, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI20149619, Length=190, Percent_Identity=29.4736842105263, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI4503817, Length=202, Percent_Identity=24.7524752475248, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI7705925, Length=262, Percent_Identity=26.7175572519084, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI32455239, Length=193, Percent_Identity=29.0155440414508, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI5031765, Length=193, Percent_Identity=29.0155440414508, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI87082100, Length=259, Percent_Identity=33.5907335907336, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI1787905, Length=254, Percent_Identity=31.8897637795276, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI87082160, Length=254, Percent_Identity=30.7086614173228, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1789208, Length=255, Percent_Identity=30.9803921568627, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI1789378, Length=269, Percent_Identity=32.7137546468402, Blast_Score=105, Evalue=4e-24, Organism=Escherichia coli, GI1787335, Length=254, Percent_Identity=31.8897637795276, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI1787526, Length=198, Percent_Identity=34.8484848484849, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1788459, Length=252, Percent_Identity=27.3809523809524, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI2367365, Length=257, Percent_Identity=30.3501945525292, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1790717, Length=256, Percent_Identity=26.171875, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1786812, Length=260, Percent_Identity=29.6153846153846, Blast_Score=85, Evalue=7e-18, Organism=Escherichia coli, GI1787820, Length=235, Percent_Identity=28.0851063829787, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI2367175, Length=260, Percent_Identity=29.6153846153846, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1789057, Length=222, Percent_Identity=27.4774774774775, Blast_Score=63, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17560150, Length=271, Percent_Identity=30.9963099630996, Blast_Score=107, Evalue=8e-24, Organism=Caenorhabditis elegans, GI17560220, Length=267, Percent_Identity=30.7116104868914, Blast_Score=105, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17562990, Length=262, Percent_Identity=31.2977099236641, Blast_Score=104, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17531453, Length=264, Percent_Identity=30.6818181818182, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17562910, Length=266, Percent_Identity=29.6992481203008, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17555706, Length=257, Percent_Identity=30.3501945525292, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI193204405, Length=266, Percent_Identity=30.0751879699248, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17562904, Length=270, Percent_Identity=30.3703703703704, Blast_Score=99, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17561402, Length=261, Percent_Identity=29.5019157088123, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI25147288, Length=256, Percent_Identity=30.859375, Blast_Score=98, Evalue=6e-21, Organism=Caenorhabditis elegans, GI17559104, Length=266, Percent_Identity=30.4511278195489, Blast_Score=98, Evalue=7e-21, Organism=Caenorhabditis elegans, GI17562906, Length=264, Percent_Identity=29.5454545454545, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17562908, Length=265, Percent_Identity=29.811320754717, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17563726, Length=278, Percent_Identity=28.0575539568345, Blast_Score=94, Evalue=9e-20, Organism=Caenorhabditis elegans, GI17560676, Length=260, Percent_Identity=28.0769230769231, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI72000259, Length=273, Percent_Identity=28.5714285714286, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17551412, Length=267, Percent_Identity=29.9625468164794, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17538480, Length=267, Percent_Identity=30.7116104868914, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17538182, Length=263, Percent_Identity=30.4182509505703, Blast_Score=88, Evalue=6e-18, Organism=Caenorhabditis elegans, GI71994604, Length=256, Percent_Identity=28.515625, Blast_Score=84, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17544670, Length=268, Percent_Identity=26.865671641791, Blast_Score=82, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17565030, Length=269, Percent_Identity=27.8810408921933, Blast_Score=81, Evalue=8e-16, Organism=Caenorhabditis elegans, GI17568967, Length=193, Percent_Identity=32.1243523316062, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17560332, Length=272, Percent_Identity=28.6764705882353, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI71994600, Length=261, Percent_Identity=26.0536398467433, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI193203117, Length=258, Percent_Identity=28.6821705426357, Blast_Score=74, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17536651, Length=262, Percent_Identity=27.8625954198473, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17564282, Length=225, Percent_Identity=29.3333333333333, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193203115, Length=255, Percent_Identity=29.0196078431373, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17536025, Length=256, Percent_Identity=27.34375, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71982365, Length=194, Percent_Identity=28.3505154639175, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17538486, Length=265, Percent_Identity=26.4150943396226, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI115534694, Length=260, Percent_Identity=27.3076923076923, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17555612, Length=217, Percent_Identity=32.258064516129, Blast_Score=68, Evalue=7e-12, Organism=Saccharomyces cerevisiae, GI6324126, Length=268, Percent_Identity=28.3582089552239, Blast_Score=82, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6322861, Length=191, Percent_Identity=30.8900523560209, Blast_Score=70, Evalue=4e-13, Organism=Drosophila melanogaster, GI24639444, Length=256, Percent_Identity=33.984375, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI23397609, Length=254, Percent_Identity=33.0708661417323, Blast_Score=107, Evalue=8e-24, Organism=Drosophila melanogaster, GI24644339, Length=255, Percent_Identity=30.5882352941176, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI21357041, Length=257, Percent_Identity=28.7937743190661, Blast_Score=98, Evalue=8e-21, Organism=Drosophila melanogaster, GI21355319, Length=259, Percent_Identity=27.4131274131274, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI28571526, Length=257, Percent_Identity=29.9610894941634, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI18859837, Length=215, Percent_Identity=32.5581395348837, Blast_Score=90, Evalue=2e-18, Organism=Drosophila melanogaster, GI21357673, Length=263, Percent_Identity=28.5171102661597, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI17737361, Length=260, Percent_Identity=30.3846153846154, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI24643142, Length=255, Percent_Identity=26.6666666666667, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24641388, Length=214, Percent_Identity=30.8411214953271, Blast_Score=78, Evalue=8e-15, Organism=Drosophila melanogaster, GI281364494, Length=203, Percent_Identity=32.0197044334975, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI21358495, Length=200, Percent_Identity=28.5, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24640492, Length=195, Percent_Identity=25.1282051282051, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24644337, Length=254, Percent_Identity=31.496062992126, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24584744, Length=197, Percent_Identity=27.9187817258883, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI28574402, Length=197, Percent_Identity=27.9187817258883, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI24641232, Length=203, Percent_Identity=26.1083743842365, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24649181, Length=192, Percent_Identity=24.4791666666667, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 31778; Mature: 31647
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAPSTPVRSRRYALAGFAGGLAAGALGGAAFAQTAHRPAPTIIAAPKRFGGKTVLVTG CCCCCCCCCCCCCEEEHHHHHHHHHHHHCHHHHHHHCCCCCCCEEECCCCCCCCEEEEEE ATSGIGRAAAIAFARQGAAVVFCGRREALGREVEAEIKAEGGRARFIRADVRVEAEMRDL CCCCCCHHHHHHHHCCCCEEEEECCHHHHCCCCEEEEECCCCEEEEEEEEEEEHHHHHHH VVQAIATFGGLDIALNNAGITIEKPLHELDAADWADVVDTNLRGVFFAMKYEIAEMLPRG HHHHHHHHCCEEEEECCCCEEEECCHHHCCCCCHHHHHCCCCCEEEEHHHHHHHHHCCCC GGTILVTSSSVVHRTGPRRSAYTATKAGLVGMVRSAALDYADNNIRINAILPGTTDTALV CCEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHH RRVAGTEGMPDAVWQIAATQWARSKMPGFKRMASPEEIAEFAVAMASPELTYMTGSALAS HHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHCCCCEEEEECCHHCC DGGTG CCCCC >Mature Secondary Structure TDAPSTPVRSRRYALAGFAGGLAAGALGGAAFAQTAHRPAPTIIAAPKRFGGKTVLVTG CCCCCCCCCCCCEEEHHHHHHHHHHHHCHHHHHHHCCCCCCCEEECCCCCCCCEEEEEE ATSGIGRAAAIAFARQGAAVVFCGRREALGREVEAEIKAEGGRARFIRADVRVEAEMRDL CCCCCCHHHHHHHHCCCCEEEEECCHHHHCCCCEEEEECCCCEEEEEEEEEEEHHHHHHH VVQAIATFGGLDIALNNAGITIEKPLHELDAADWADVVDTNLRGVFFAMKYEIAEMLPRG HHHHHHHHCCEEEEECCCCEEEECCHHHCCCCCHHHHHCCCCCEEEEHHHHHHHHHCCCC GGTILVTSSSVVHRTGPRRSAYTATKAGLVGMVRSAALDYADNNIRINAILPGTTDTALV CCEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHH RRVAGTEGMPDAVWQIAATQWARSKMPGFKRMASPEEIAEFAVAMASPELTYMTGSALAS HHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHCCCCEEEEECCHHCC DGGTG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]