| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343314
Identifier: 146343314
GI number: 146343314
Start: 6792005
End: 6792823
Strand: Direct
Name: 146343314
Synonym: BRADO6539
Alternate gene names: NA
Gene position: 6792005-6792823 (Clockwise)
Preceding gene: 146343313
Following gene: 146343315
Centisome position: 91.09
GC content: 66.54
Gene sequence:
>819_bases ATGGCCACGCCTCTGAACCAACGCGTCCATGCGTGGCTCGCCGGCAATCCGGATGAAAGCGTGCTGCGCTGGGTGTTCCG CTCGATCCTCGTCGTCACTGTCGTGATCCTGGCGTTGGATCTGATCGATCAGACCACCCCGCATGCCGCGTCCGACACCG CTCAGCCCCAGCTCGACATTCAGCGTGATCAGCCTGATGGGCCAGCCGATTCTCCCGCCGTGCTCACGCCGCTGCTGAAG CGGCTGATGCCGCTGCCCAAGGGCGATCCCGCGCTCGAGCAGCCGATCAGCCTGGAGCTCCGCGGCGGCGGCCGGCTGTA TGCGACCGGCACGATCACGCCCGGCAGTGCGCGCGCTTTCGCCGATGAGGTCGAGCGGCACGGCGAATACGTCAAGACCG TCGTGCTGAACTCGCCGGGTGGCTCGGTCGCCGATGCGCTGGCGATGGGACGGCTCATTCGCAACCGGAAATTCGCTACC GAGATCGAGGCCGGCAAGACCTGTGCCTCATCGTGTCCGCTGGTGTTCGCCGGCGGCATCGAGCGCCGCGCCGGCGAGCG GGCGATGATCGGCGTGCACCAGATCGCCGCCGTCCGCTCCGCCAAGCCCGCCCGCACCGACGACGACATGAGCCTCGCGC AGAACGTCTCGGCGCGCTGCCAGCGTCATCTGGCCGACATGGGCATCGATCTCAAGGTCTGGGTGCATGCGATGGAGACG CCGCATGACCAGCTGTTCACCTTCACGCCCGACGAGCTGAAATCACTCAATCTGGTCACCTCGGCGCCGGAATCGCGTCC TGAAAAACCACGCAGTTAG
Upstream 100 bases:
>100_bases ATCCGCGCCCATCCTTGAGCCACAGCCGTCTGCGCCTCCAACCGCCGCGACGGAGGAGAACGTCACCTCTTTGTCCTCCG CACGCATCGGCAAGTAGTGC
Downstream 100 bases:
>100_bases TTTGTTGGGTAGCGCTTGAACCTTCCGCTGCGAGGGCGGAACCAAGCTTCGACGGCGGCGTTGTCGGCCGTCACACTGGA GAACATGATCATGCGGACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MATPLNQRVHAWLAGNPDESVLRWVFRSILVVTVVILALDLIDQTTPHAASDTAQPQLDIQRDQPDGPADSPAVLTPLLK RLMPLPKGDPALEQPISLELRGGGRLYATGTITPGSARAFADEVERHGEYVKTVVLNSPGGSVADALAMGRLIRNRKFAT EIEAGKTCASSCPLVFAGGIERRAGERAMIGVHQIAAVRSAKPARTDDDMSLAQNVSARCQRHLADMGIDLKVWVHAMET PHDQLFTFTPDELKSLNLVTSAPESRPEKPRS
Sequences:
>Translated_272_residues MATPLNQRVHAWLAGNPDESVLRWVFRSILVVTVVILALDLIDQTTPHAASDTAQPQLDIQRDQPDGPADSPAVLTPLLK RLMPLPKGDPALEQPISLELRGGGRLYATGTITPGSARAFADEVERHGEYVKTVVLNSPGGSVADALAMGRLIRNRKFAT EIEAGKTCASSCPLVFAGGIERRAGERAMIGVHQIAAVRSAKPARTDDDMSLAQNVSARCQRHLADMGIDLKVWVHAMET PHDQLFTFTPDELKSLNLVTSAPESRPEKPRS >Mature_271_residues ATPLNQRVHAWLAGNPDESVLRWVFRSILVVTVVILALDLIDQTTPHAASDTAQPQLDIQRDQPDGPADSPAVLTPLLKR LMPLPKGDPALEQPISLELRGGGRLYATGTITPGSARAFADEVERHGEYVKTVVLNSPGGSVADALAMGRLIRNRKFATE IEAGKTCASSCPLVFAGGIERRAGERAMIGVHQIAAVRSAKPARTDDDMSLAQNVSARCQRHLADMGIDLKVWVHAMETP HDQLFTFTPDELKSLNLVTSAPESRPEKPRS
Specific function: Unknown
COG id: COG3904
COG function: function code S; Predicted periplasmic protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29430; Mature: 29299
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPLNQRVHAWLAGNPDESVLRWVFRSILVVTVVILALDLIDQTTPHAASDTAQPQLDI CCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE QRDQPDGPADSPAVLTPLLKRLMPLPKGDPALEQPISLELRGGGRLYATGTITPGSARAF ECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCHHHH ADEVERHGEYVKTVVLNSPGGSVADALAMGRLIRNRKFATEIEAGKTCASSCPLVFAGGI HHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHCCCEEEECCC ERRAGERAMIGVHQIAAVRSAKPARTDDDMSLAQNVSARCQRHLADMGIDLKVWVHAMET HHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC PHDQLFTFTPDELKSLNLVTSAPESRPEKPRS CCCCEEEECHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure ATPLNQRVHAWLAGNPDESVLRWVFRSILVVTVVILALDLIDQTTPHAASDTAQPQLDI CCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE QRDQPDGPADSPAVLTPLLKRLMPLPKGDPALEQPISLELRGGGRLYATGTITPGSARAF ECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCHHHH ADEVERHGEYVKTVVLNSPGGSVADALAMGRLIRNRKFATEIEAGKTCASSCPLVFAGGI HHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHCCCEEEECCC ERRAGERAMIGVHQIAAVRSAKPARTDDDMSLAQNVSARCQRHLADMGIDLKVWVHAMET HHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC PHDQLFTFTPDELKSLNLVTSAPESRPEKPRS CCCCEEEECHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA