| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343280
Identifier: 146343280
GI number: 146343280
Start: 6749072
End: 6750043
Strand: Direct
Name: 146343280
Synonym: BRADO6501
Alternate gene names: NA
Gene position: 6749072-6750043 (Clockwise)
Preceding gene: 146343279
Following gene: 146343281
Centisome position: 90.51
GC content: 66.26
Gene sequence:
>972_bases ATGTCCGTACTCGGCACCGGCGACTACACCTACCGCGTCGTCAAGGATTGGGCGAAGCTGCCCGAGGGGTGGGCGCTGAC CGACGTCGCTTCCGTCGCGGTCGACAGCAAGGACCGCGTCTACGCCTTCAACCGCGGCGCCCATCCGTTGATCGTGTTCG ATCGCGACGGCAACTTTCTGCGCAGCTGGGGCGAGGGCCTGTTCAGCCGCGCCCACGGGCTGTCGATCGATGCCGACGAC AATCTCTACTGCACCGACGACGGCGACCACACCGTGCGCAAATGCACGCCCGACGGGAAGGTGCTTCTCACCATCGGCCT GCCGGAGCGCCCCACCCCGTTCATGAGCGGCGAGCCGTTCAATCGCTGCACCCACACCGCACTGTCGCCGTCGGGCGAGA TCTACGTCTCCGACGGCTATGGCAACGCGCGGGTCCACAAATACACGCCCGACGGCAAGCTGATCAGAAGCTGGGGCGAG CCGGGATCGGATCCCGGCCAGTTCAACATCGTTCACAACATTGCGACCGATGCGGACGGCTTCGTCTACGTCGCCGACCG CGAGAACCACCGCATCCAGATCTTCGACGGCGAAGGCCGCTACGAGACGCAGTGGAACAACCTGCACCGGCCCTGCGCGC TGTGCGCCTGCGGCGCCAAGCGCAAGACCTTCATCATCGGCGAGCTCGGGCCGGGCATGCCGGTCAACCTCAACGTTCCA AATCTTGGGCCGCGGCTGACGATCTCGGATTCCACCGGCAAGCGGCTGGCGCGACTTGGCGGGGAGCACGGTCCGGGGCT GGAAACCGGGCGTTTTCTGGCGCCGCACGGGCTCGCCATCGACAGCCGCGGCGACATCTATGTCGGCGAGGTCGGCGTCA CCAATTGGAGCACGAGCTTCCCCGGTCAGCCGATGCCCGACGAGGTCAGGATCCATCGCTGCCTGCAGAAGCTGCAGCGG GTTTCGGCCTGA
Upstream 100 bases:
>100_bases TCAGGGCCACATGCTGTCGATGGCAGGCTGAGCGGGTTTCCGCCCGCCGTCAAACCCGTGTAGCCTCGTTCGAACTGAGC TTGCATGGGGGAACCAGGCG
Downstream 100 bases:
>100_bases GGCGATCAGGCGAGCTGATCGCCTCCGTTCTGCAAGTGAGTTGCACTGCAGCGAGGCATGGCGCTGCCACGGTTCTGACG CCCTTTCACCGATGCTGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NHL Repeat-Containing Protein; NHL Repeat Protein; Peptidylglycine Monooxygenase; Twin-Arginine Translocation Pathway Signal; Peptidylamidoglycolate Lyase; PA14 Domain-Containing Protein; Signal Peptide; Ring Finger; Type I Secretion Outer Membrane Protein lC; Coagulation Factor 5/8 Type Domain Protein; SMP-30/Gluconolaconase/LRE Domain Protein; Peptidylglycine Alpha-Amidating Monooxygenase; PKD Domain Containing Protein; Cell Surface Protein; Surface Layer Protein
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MSVLGTGDYTYRVVKDWAKLPEGWALTDVASVAVDSKDRVYAFNRGAHPLIVFDRDGNFLRSWGEGLFSRAHGLSIDADD NLYCTDDGDHTVRKCTPDGKVLLTIGLPERPTPFMSGEPFNRCTHTALSPSGEIYVSDGYGNARVHKYTPDGKLIRSWGE PGSDPGQFNIVHNIATDADGFVYVADRENHRIQIFDGEGRYETQWNNLHRPCALCACGAKRKTFIIGELGPGMPVNLNVP NLGPRLTISDSTGKRLARLGGEHGPGLETGRFLAPHGLAIDSRGDIYVGEVGVTNWSTSFPGQPMPDEVRIHRCLQKLQR VSA
Sequences:
>Translated_323_residues MSVLGTGDYTYRVVKDWAKLPEGWALTDVASVAVDSKDRVYAFNRGAHPLIVFDRDGNFLRSWGEGLFSRAHGLSIDADD NLYCTDDGDHTVRKCTPDGKVLLTIGLPERPTPFMSGEPFNRCTHTALSPSGEIYVSDGYGNARVHKYTPDGKLIRSWGE PGSDPGQFNIVHNIATDADGFVYVADRENHRIQIFDGEGRYETQWNNLHRPCALCACGAKRKTFIIGELGPGMPVNLNVP NLGPRLTISDSTGKRLARLGGEHGPGLETGRFLAPHGLAIDSRGDIYVGEVGVTNWSTSFPGQPMPDEVRIHRCLQKLQR VSA >Mature_322_residues SVLGTGDYTYRVVKDWAKLPEGWALTDVASVAVDSKDRVYAFNRGAHPLIVFDRDGNFLRSWGEGLFSRAHGLSIDADDN LYCTDDGDHTVRKCTPDGKVLLTIGLPERPTPFMSGEPFNRCTHTALSPSGEIYVSDGYGNARVHKYTPDGKLIRSWGEP GSDPGQFNIVHNIATDADGFVYVADRENHRIQIFDGEGRYETQWNNLHRPCALCACGAKRKTFIIGELGPGMPVNLNVPN LGPRLTISDSTGKRLARLGGEHGPGLETGRFLAPHGLAIDSRGDIYVGEVGVTNWSTSFPGQPMPDEVRIHRCLQKLQRV SA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI293336314, Length=320, Percent_Identity=30.9375, Blast_Score=105, Evalue=5e-23, Organism=Homo sapiens, GI21070974, Length=320, Percent_Identity=30.9375, Blast_Score=105, Evalue=5e-23, Organism=Homo sapiens, GI21070984, Length=320, Percent_Identity=30.9375, Blast_Score=105, Evalue=5e-23, Organism=Homo sapiens, GI21070982, Length=320, Percent_Identity=30.9375, Blast_Score=105, Evalue=6e-23, Organism=Homo sapiens, GI21070980, Length=297, Percent_Identity=30.976430976431, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI61098457, Length=304, Percent_Identity=29.9342105263158, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI84993742, Length=181, Percent_Identity=26.5193370165746, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI194248079, Length=160, Percent_Identity=28.75, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI194248081, Length=160, Percent_Identity=28.75, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI32454739, Length=180, Percent_Identity=27.7777777777778, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI32454737, Length=180, Percent_Identity=27.7777777777778, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI115533679, Length=246, Percent_Identity=30.4878048780488, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI32564868, Length=152, Percent_Identity=31.5789473684211, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17553622, Length=204, Percent_Identity=28.4313725490196, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI24655386, Length=237, Percent_Identity=29.1139240506329, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI22024206, Length=237, Percent_Identity=29.1139240506329, Blast_Score=93, Evalue=3e-19, Organism=Drosophila melanogaster, GI221330419, Length=237, Percent_Identity=29.1139240506329, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI221330110, Length=284, Percent_Identity=29.5774647887324, Blast_Score=91, Evalue=9e-19, Organism=Drosophila melanogaster, GI24652264, Length=284, Percent_Identity=29.5774647887324, Blast_Score=91, Evalue=1e-18, Organism=Drosophila melanogaster, GI281364133, Length=146, Percent_Identity=33.5616438356164, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24762365, Length=146, Percent_Identity=33.5616438356164, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35436; Mature: 35305
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS51125 NHL L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLGTGDYTYRVVKDWAKLPEGWALTDVASVAVDSKDRVYAFNRGAHPLIVFDRDGNFL CCEEECCCEEHHHHHHHHHCCCCCCHHHHHHHEECCCCCEEEECCCCCEEEEEECCCCHH RSWGEGLFSRAHGLSIDADDNLYCTDDGDHTVRKCTPDGKVLLTIGLPERPTPFMSGEPF HHHHHHHHHHHCCCEECCCCCEEEECCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCH NRCTHTALSPSGEIYVSDGYGNARVHKYTPDGKLIRSWGEPGSDPGQFNIVHNIATDADG HHHHHHHCCCCCCEEEECCCCCCEEEEECCCCHHHHCCCCCCCCCCEEEEEEEECCCCCC FVYVADRENHRIQIFDGEGRYETQWNNLHRPCALCACGAKRKTFIIGELGPGMPVNLNVP EEEEEECCCCEEEEECCCCCEECCCCCCCCCHHEEECCCCCCEEEEEECCCCCEEEEECC NLGPRLTISDSTGKRLARLGGEHGPGLETGRFLAPHGLAIDSRGDIYVGEVGVTNWSTSF CCCCEEEEECCCHHHHHHHCCCCCCCCCCCCEECCCCEEECCCCCEEEEEEECCCCCCCC PGQPMPDEVRIHRCLQKLQRVSA CCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SVLGTGDYTYRVVKDWAKLPEGWALTDVASVAVDSKDRVYAFNRGAHPLIVFDRDGNFL CEEECCCEEHHHHHHHHHCCCCCCHHHHHHHEECCCCCEEEECCCCCEEEEEECCCCHH RSWGEGLFSRAHGLSIDADDNLYCTDDGDHTVRKCTPDGKVLLTIGLPERPTPFMSGEPF HHHHHHHHHHHCCCEECCCCCEEEECCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCH NRCTHTALSPSGEIYVSDGYGNARVHKYTPDGKLIRSWGEPGSDPGQFNIVHNIATDADG HHHHHHHCCCCCCEEEECCCCCCEEEEECCCCHHHHCCCCCCCCCCEEEEEEEECCCCCC FVYVADRENHRIQIFDGEGRYETQWNNLHRPCALCACGAKRKTFIIGELGPGMPVNLNVP EEEEEECCCCEEEEECCCCCEECCCCCCCCCHHEEECCCCCCEEEEEECCCCCEEEEECC NLGPRLTISDSTGKRLARLGGEHGPGLETGRFLAPHGLAIDSRGDIYVGEVGVTNWSTSF CCCCEEEEECCCHHHHHHHCCCCCCCCCCCCEECCCCEEECCCCCEEEEEEECCCCCCCC PGQPMPDEVRIHRCLQKLQRVSA CCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA