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The map label for this gene is cyc1 [H]

Identifier: 146343092

GI number: 146343092

Start: 6528174

End: 6528815

Strand: Direct

Name: cyc1 [H]

Synonym: BRADO6287

Alternate gene names: 146343092

Gene position: 6528174-6528815 (Clockwise)

Preceding gene: 146343087

Following gene: 146343099

Centisome position: 87.55

GC content: 60.44

Gene sequence:

>642_bases
ATGCTGGCGAATTGGTTGAAGCGAACGGCTCCGGCCGTTGTCCTCGTCATCGGCTGCGGATCAGGACAGGCTGCGGAGGG
GGGGAGCGTCTCTAAGGCGGAGTTGGACGCCAAGGTCACCTACTGCAAGACCTGCCATGGCTTGCAGGCCGAAGGATTTC
GAGGAAGCTATCCGATGCCGCGCCTTGCCGGACAGCAGCCAGAATATATCGAGAACCAGTTGCGGGCCTTCAACGAGCGG
CGGCGAACCAATCCCATCATGTTCAACGTCGCGCACAGTTTGAGCCCGGACATTTTGAAGGCCTTGACCTCCTATTTTCT
GAATTTGAACCCGAAGCCACTCGGCGGAGGTGACAAGACGAGAATTGCCGCGGGGCGACAGATCTTCACTGATGGCGTGC
TCAGCGCGGAAGTTCCCGCTTGCGCGACCTGCCATGGCGCGGACGGCAAGGGATCTGGCGCCGTCCCGCGTCTGGCCGGC
CAGTTGCCCGACTATATCCTGACAAAGCTGACCAACTGGAGCAAGGAGCGCGGCCTGGACAAGACCAAGCCCGACAGCTC
GGAGATCATGGCGCCGATCGCCCACAATCTGACCGAGGTCCAGATCAAGCAGGTCGCTGCCTATGTCAGCACTCTCGAAT
AG

Upstream 100 bases:

>100_bases
CAGAACAGCAAATCGGATTGCTTTGATGTGAGGTGTTCCTGCAACAAGAGATGCAAGCGGGTGTAAGACGCGCGCGAGAT
ATCTTCGAGGGGATGGCGTT

Downstream 100 bases:

>100_bases
CTGACGCCATGAGGCGCCGTCCCATCGATGATCCATTGCTACCGGCTGCTCTAGCCTGCGAGCACCGATAGCAGCAGCGC
CGTATAGACCTGGAGGCGCC

Product: putative cytochrome c family protein

Products: NA

Alternate protein names: Cytochrome c552 [H]

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MLANWLKRTAPAVVLVIGCGSGQAAEGGSVSKAELDAKVTYCKTCHGLQAEGFRGSYPMPRLAGQQPEYIENQLRAFNER
RRTNPIMFNVAHSLSPDILKALTSYFLNLNPKPLGGGDKTRIAAGRQIFTDGVLSAEVPACATCHGADGKGSGAVPRLAG
QLPDYILTKLTNWSKERGLDKTKPDSSEIMAPIAHNLTEVQIKQVAAYVSTLE

Sequences:

>Translated_213_residues
MLANWLKRTAPAVVLVIGCGSGQAAEGGSVSKAELDAKVTYCKTCHGLQAEGFRGSYPMPRLAGQQPEYIENQLRAFNER
RRTNPIMFNVAHSLSPDILKALTSYFLNLNPKPLGGGDKTRIAAGRQIFTDGVLSAEVPACATCHGADGKGSGAVPRLAG
QLPDYILTKLTNWSKERGLDKTKPDSSEIMAPIAHNLTEVQIKQVAAYVSTLE
>Mature_213_residues
MLANWLKRTAPAVVLVIGCGSGQAAEGGSVSKAELDAKVTYCKTCHGLQAEGFRGSYPMPRLAGQQPEYIENQLRAFNER
RRTNPIMFNVAHSLSPDILKALTSYFLNLNPKPLGGGDKTRIAAGRQIFTDGVLSAEVPACATCHGADGKGSGAVPRLAG
QLPDYILTKLTNWSKERGLDKTKPDSSEIMAPIAHNLTEVQIKQVAAYVSTLE

Specific function: Diheme, high potential cytochrome c [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 22853; Mature: 22853

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLANWLKRTAPAVVLVIGCGSGQAAEGGSVSKAELDAKVTYCKTCHGLQAEGFRGSYPMP
CCCHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
RLAGQQPEYIENQLRAFNERRRTNPIMFNVAHSLSPDILKALTSYFLNLNPKPLGGGDKT
CCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHCCHHHHHHHHHHHHCCCCCCCCCCCCH
RIAAGRQIFTDGVLSAEVPACATCHGADGKGSGAVPRLAGQLPDYILTKLTNWSKERGLD
HHHCCCHHHHCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHCHHHHHHHHHCCHHHCCCC
KTKPDSSEIMAPIAHNLTEVQIKQVAAYVSTLE
CCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLANWLKRTAPAVVLVIGCGSGQAAEGGSVSKAELDAKVTYCKTCHGLQAEGFRGSYPMP
CCCHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
RLAGQQPEYIENQLRAFNERRRTNPIMFNVAHSLSPDILKALTSYFLNLNPKPLGGGDKT
CCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHCCHHHHHHHHHHHHCCCCCCCCCCCCH
RIAAGRQIFTDGVLSAEVPACATCHGADGKGSGAVPRLAGQLPDYILTKLTNWSKERGLD
HHHCCCHHHHCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHCHHHHHHHHHCCHHHCCCC
KTKPDSSEIMAPIAHNLTEVQIKQVAAYVSTLE
CCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973648 [H]