| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343084
Identifier: 146343084
GI number: 146343084
Start: 6521083
End: 6521886
Strand: Direct
Name: 146343084
Synonym: BRADO6279
Alternate gene names: NA
Gene position: 6521083-6521886 (Clockwise)
Preceding gene: 146343082
Following gene: 146343085
Centisome position: 87.45
GC content: 67.91
Gene sequence:
>804_bases ATGAGTGCCGACACCCCGCCTGTCCCCCAACTCGCCGCCCGCGCCCTGCAGATCGCAGACCGCATCAATACCGCCGGCTT CGAGGGCCAGGTTCTGTCGGCCACCCCGCTCGCCGTCCGCATCGGCGAGACCGGCATCGCGGTGGTTTTTCGCTACGGCG TCGTCGTCTTCATCGGCCTCACCGTCGCCGAGGAGCTCAACTTCCTCGACCAGCTGAGCTCGCGGCTGTTCGGCGCGATC ACCCCGCACGAGGAAGAGACGGCCAGGGTCCAGGTCGCGGGCGAGTCCGACGAGCCGATTCCCGTGGGTGGGCCGATCCA GGTCAAGGAATTGTCGCTGGAGCGCCTGCTCATCGTTGCCGATGCGCTGGCCAAGAGCGTCGTGCTCGGCCGCAGCGAGC GCGAGATCGCCAACGTGTTCGACACGATCGAGCCGTTCGCGCGCGAGCTCGCCTCGCTCGGACGCACATCGCGCAGCCGG GTCGCGATGGTCAGGCTGCTCGGCGCCGCGCTGCTGGTGCAGCACCGCGTCTCCGGCCGCGTCGCCGTCAGCGAAAAGCC CGATGTGCTGTGGGACCGGCCCGATCTCGAGCGGCTCTACGCCCGGCTGGAGGACGAGTACGAGCTGAAGGAGCGCGAGG ACACGCTCAATCGCAAACTCGTCGTGATCGCCGAGACGGCGACCGCAGTCGCCGACATCATCGACACCAAGCGCTCGCTG CGGCTCGAGATCATCGTCGTGATCCTGATCGCCTGCGAGATCGTGCTCGGCTTCTACGAGATCTTCGCCCGCGGCGGGCA TTGA
Upstream 100 bases:
>100_bases TCCCTGTCAAGCGGGTTCGGCTTCGGGACAGCAGGGACATCGGCTGCCACGCCCGCGCCATGTTATCGTTTCGTCGGATT CGACATGCTAGCCTTGGCTC
Downstream 100 bases:
>100_bases GCACACCGGCCTGCCACGGACGTGTCATGGATCTCTGGTTGTATTTCCTTGCCGGCATTCTATCATTCGCCGCAGTCCTG CCGGGGATCACGGAGGTACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MSADTPPVPQLAARALQIADRINTAGFEGQVLSATPLAVRIGETGIAVVFRYGVVVFIGLTVAEELNFLDQLSSRLFGAI TPHEEETARVQVAGESDEPIPVGGPIQVKELSLERLLIVADALAKSVVLGRSEREIANVFDTIEPFARELASLGRTSRSR VAMVRLLGAALLVQHRVSGRVAVSEKPDVLWDRPDLERLYARLEDEYELKEREDTLNRKLVVIAETATAVADIIDTKRSL RLEIIVVILIACEIVLGFYEIFARGGH
Sequences:
>Translated_267_residues MSADTPPVPQLAARALQIADRINTAGFEGQVLSATPLAVRIGETGIAVVFRYGVVVFIGLTVAEELNFLDQLSSRLFGAI TPHEEETARVQVAGESDEPIPVGGPIQVKELSLERLLIVADALAKSVVLGRSEREIANVFDTIEPFARELASLGRTSRSR VAMVRLLGAALLVQHRVSGRVAVSEKPDVLWDRPDLERLYARLEDEYELKEREDTLNRKLVVIAETATAVADIIDTKRSL RLEIIVVILIACEIVLGFYEIFARGGH >Mature_266_residues SADTPPVPQLAARALQIADRINTAGFEGQVLSATPLAVRIGETGIAVVFRYGVVVFIGLTVAEELNFLDQLSSRLFGAIT PHEEETARVQVAGESDEPIPVGGPIQVKELSLERLLIVADALAKSVVLGRSEREIANVFDTIEPFARELASLGRTSRSRV AMVRLLGAALLVQHRVSGRVAVSEKPDVLWDRPDLERLYARLEDEYELKEREDTLNRKLVVIAETATAVADIIDTKRSLR LEIIVVILIACEIVLGFYEIFARGGH
Specific function: Unknown
COG id: COG1723
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI157388927, Length=235, Percent_Identity=24.2553191489362, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6320203, Length=214, Percent_Identity=24.2990654205607, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI18859701, Length=139, Percent_Identity=30.2158273381295, Blast_Score=72, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29245; Mature: 29114
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSADTPPVPQLAARALQIADRINTAGFEGQVLSATPLAVRIGETGIAVVFRYGVVVFIGL CCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHH TVAEELNFLDQLSSRLFGAITPHEEETARVQVAGESDEPIPVGGPIQVKELSLERLLIVA HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEHHHHHHHHHHHH DALAKSVVLGRSEREIANVFDTIEPFARELASLGRTSRSRVAMVRLLGAALLVQHRVSGR HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCE VAVSEKPDVLWDRPDLERLYARLEDEYELKEREDTLNRKLVVIAETATAVADIIDTKRSL EEECCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHH RLEIIVVILIACEIVLGFYEIFARGGH HHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SADTPPVPQLAARALQIADRINTAGFEGQVLSATPLAVRIGETGIAVVFRYGVVVFIGL CCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHH TVAEELNFLDQLSSRLFGAITPHEEETARVQVAGESDEPIPVGGPIQVKELSLERLLIVA HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEHHHHHHHHHHHH DALAKSVVLGRSEREIANVFDTIEPFARELASLGRTSRSRVAMVRLLGAALLVQHRVSGR HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCE VAVSEKPDVLWDRPDLERLYARLEDEYELKEREDTLNRKLVVIAETATAVADIIDTKRSL EEECCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCEEEEEECHHHHHHHHHHHHHHH RLEIIVVILIACEIVLGFYEIFARGGH HHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA