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The map label for this gene is bphR [H]

Identifier: 146343043

GI number: 146343043

Start: 6474678

End: 6475382

Strand: Reverse

Name: bphR [H]

Synonym: BRADO6233

Alternate gene names: 146343043

Gene position: 6475382-6474678 (Counterclockwise)

Preceding gene: 146343045

Following gene: 146343042

Centisome position: 86.84

GC content: 68.79

Gene sequence:

>705_bases
ATGGTGCTTCAAATCTCGGCCGAGTTCGCCATGTCCGGAAGCGCTACCCAGACCGTCTATGAGAAACTGCGCGCCAGCCT
GCTCGCCGGCCTCTACCAGCCGGAGGAGAAGCTGAAGATCAGCGAGCTCGGGGCCGCGTTCGCGGTCAGCCCCGGAGCGA
TCCGCGAGGCGCTGGCGCGGCTGACGGCGGAAGGACTGGTGACGGCGCTGCCGCAGCGCGGCTTCCGTGTCGCGCCGGTG
TCGGTCGCCGATCTGCGTGATCTCACCGACATGCGTATCGAGATCGAGACCAAGTGCCTGCGCCGCGCCATCGCCAATGG
CGATCTGGGTTGGGAAACCGCGGTCATCGCCGCGCATCATCGCATGGCGGCAACACCGATCGCCGCCGACGACGGCAGCT
TCTCGCCGGCCTGGACCATCGCGCATGGTGAGTTTCACGCCGCGCTTGCGCAGGCCTGCGGCAGCTTCTGGATGTTGCGG
GTGCGCGATCTCCTGTTCGTCCACAACGAGCGCTATCTCGACCTCGCCCGCAAGGCCGATCGCGGCCGGCGCGACGCCGC
GCGCGAGCACCGCGAACTGATGGAGGCGGCACTGGCGCGCGACGCGGAGCGCGCGGCCGCGGTTATGGCCGCGCATCTCG
GCAAGACCCGGGACACGATCGAAGCGGTGCTGCTCGCCTCTGCTGCGCTCAGCGCGCAGAGGTAA

Upstream 100 bases:

>100_bases
CGCGCTGTCGGCGGCGTTCTGTCGGGCAGCATAGGGCGCGGGTCAACGTATCATCAATAAAAATATATTTTTTGCTGAAA
ATGTATTTTCGATCTCTGTT

Downstream 100 bases:

>100_bases
CGGCCATGACAGCATGGCGGCAGACTGTGCTCTGGCCGCTCTCGCGCAGTCCCGCGGCTTGCGTCATCTTTGCCCGCCCG
CGCCGTCTCAGGGAGCGCGC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MVLQISAEFAMSGSATQTVYEKLRASLLAGLYQPEEKLKISELGAAFAVSPGAIREALARLTAEGLVTALPQRGFRVAPV
SVADLRDLTDMRIEIETKCLRRAIANGDLGWETAVIAAHHRMAATPIAADDGSFSPAWTIAHGEFHAALAQACGSFWMLR
VRDLLFVHNERYLDLARKADRGRRDAAREHRELMEAALARDAERAAAVMAAHLGKTRDTIEAVLLASAALSAQR

Sequences:

>Translated_234_residues
MVLQISAEFAMSGSATQTVYEKLRASLLAGLYQPEEKLKISELGAAFAVSPGAIREALARLTAEGLVTALPQRGFRVAPV
SVADLRDLTDMRIEIETKCLRRAIANGDLGWETAVIAAHHRMAATPIAADDGSFSPAWTIAHGEFHAALAQACGSFWMLR
VRDLLFVHNERYLDLARKADRGRRDAAREHRELMEAALARDAERAAAVMAAHLGKTRDTIEAVLLASAALSAQR
>Mature_234_residues
MVLQISAEFAMSGSATQTVYEKLRASLLAGLYQPEEKLKISELGAAFAVSPGAIREALARLTAEGLVTALPQRGFRVAPV
SVADLRDLTDMRIEIETKCLRRAIANGDLGWETAVIAAHHRMAATPIAADDGSFSPAWTIAHGEFHAALAQACGSFWMLR
VRDLLFVHNERYLDLARKADRGRRDAAREHRELMEAALARDAERAAAVMAAHLGKTRDTIEAVLLASAALSAQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082149, Length=198, Percent_Identity=35.3535353535354, Blast_Score=115, Evalue=3e-27,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 25385; Mature: 25385

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLQISAEFAMSGSATQTVYEKLRASLLAGLYQPEEKLKISELGAAFAVSPGAIREALAR
CEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHCCCCHHHHHHHHH
LTAEGLVTALPQRGFRVAPVSVADLRDLTDMRIEIETKCLRRAIANGDLGWETAVIAAHH
HHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RMAATPIAADDGSFSPAWTIAHGEFHAALAQACGSFWMLRVRDLLFVHNERYLDLARKAD
HHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHC
RGRRDAAREHRELMEAALARDAERAAAVMAAHLGKTRDTIEAVLLASAALSAQR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVLQISAEFAMSGSATQTVYEKLRASLLAGLYQPEEKLKISELGAAFAVSPGAIREALAR
CEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHHCCCCHHHHHHHHH
LTAEGLVTALPQRGFRVAPVSVADLRDLTDMRIEIETKCLRRAIANGDLGWETAVIAAHH
HHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
RMAATPIAADDGSFSPAWTIAHGEFHAALAQACGSFWMLRVRDLLFVHNERYLDLARKAD
HHHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHC
RGRRDAAREHRELMEAALARDAERAAAVMAAHLGKTRDTIEAVLLASAALSAQR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1569021 [H]