| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343040
Identifier: 146343040
GI number: 146343040
Start: 6471543
End: 6473102
Strand: Direct
Name: 146343040
Synonym: BRADO6230
Alternate gene names: NA
Gene position: 6471543-6473102 (Clockwise)
Preceding gene: 146343039
Following gene: 146343044
Centisome position: 86.79
GC content: 61.54
Gene sequence:
>1560_bases GTGGGTATCAACGGACCCAAGAGCCGGGCGACCGCGCTCGTTGCGCGCTTCGTCGGGGACAGCAAGGCCAACATCGCCAC GACGTTCGCGCTGGCGCTGTTGCCGATCCTGACAGCGATTGGCTGTGGAACCGACTACTCCATGGCCATGCGATTGAAGG TCAAGCTGCAGTCCGCGGCGGATGCGGCCAGCATCGCCTCCATCTCCGTCAACTCGGCCGGCTATGCCGCGGCCATGGCG ATGACGTCGGACGGGTCCGTCACCGCGGGTGTCAACGAAGCCGACAACATTTTCAAGGGCAACGCGTCGACGTTCGGAGG CTATACGCTGACGTCCGAAACCAGCACCGTCACCAAGACGCGGTCGACGCTCTCATCGCAAGTCCAGTTCACCGCGGCGG TTCCGACCACGTTCCTCACCGTGATCGGCTATCAGTCGATCACCGTCAGCGGCAGCTCGTCCTCGTCGGTTACCTTGCCG CTCTATCTCGATTTCTATCTGACCCTGGATGTGTCGGGATCGATGGGTCTGCCCTCGACATCGGCCGAAGCACAGCGCAT GCAGGCCATCAGCCCGGACAACTACCGGCAATATCCGACCGGCTGCACGCTCGCGTGCCACTTCTCGCCGCAGAACAGCG CCTGCACCGACTCTGGAACCCAGGGCTATCCAACCAACAATTATTGCCTGGGCTATGCGATCTCGCGCGTCAGTCAGAGC GGCTACAAGAGCCTGCTGACCACCAACAAGAACAATCCGAAGGGCGTCCAGCTCCCGTCGTCGATCGTCTCGGGATTGCC GAACTCCCTTTACAACAAGCTGCCGACGGTGGCGAACTGCCCGACAGACGGAACGGATGACTGTATCCAGTTGCGCCTGG ACGCCGTCGGCTACGCCGTCAATCAGCTGTTCACGACGGCCAATACCACCAAGAAGGTCGCCAATCAGTTCCGGATCGGG CTGTACCCGTTCATCCGCTACCTCTATTCCTATTATCCGCTGACCACCAACATCAGCGGCTCGACGAGCGATTCTTCGAC GATCAACTATGCCGCGGCGAACCTGGCGACGCTGCTCGACACCAACACCAACGCCTCGCTGGGCTCGGGCGGCACGCACA TCGACACGGCGCTCTCGAGCGTCAACAGCCTGATCACCAGCGTCGGCGATGGCAGCGCCACGACCAACACGCTTCCCTAT GTCTTCCTGGTCACCGACGGCGCGCAGGATCCGCAGGTGAAGGGTGTGCCGAACGGCTCGTGGTCCGGCAGCAATCATGC CACCACGATCAACCCCACCACGTCATGCACGCCGCTGAAGAATCGCGGGATCATCATTTCCGTCCTCTACATCCCCTATC AGACGATCAACCCGGTCAATGCGTCGTTCGCCGGCGACGAGGACGACTATGCCAACAACAACATCCCCAACATTCCGCCG AGCCTGCAGGCCTGCGCATCGCCTGGATTCTTCTACACTGCGAACACGCCGGCGGATATCACGTCGGCGCTGAACGCGAT GTTCAATCATGCGGTCTCCGAGGCGCACCTGACGAGGTGA
Upstream 100 bases:
>100_bases AGCTGGATCAGCGCGGCAAACAGCCTCCGCCGATCCGAAGGCAGGACGGCCAACAAGAACAACGACCGGCTCCAACGAGT CCGGATCATGGAGGTCGAGC
Downstream 100 bases:
>100_bases CCGCAAGGCTGGACGATGCCGTCGTGATCGCGCGATCACGATCGCCGCGCGAATCCGGTCGACGCAAGGTCAGCGTCGCG GATCGTGCTCGGATGGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 519; Mature: 518
Protein sequence:
>519_residues MGINGPKSRATALVARFVGDSKANIATTFALALLPILTAIGCGTDYSMAMRLKVKLQSAADAASIASISVNSAGYAAAMA MTSDGSVTAGVNEADNIFKGNASTFGGYTLTSETSTVTKTRSTLSSQVQFTAAVPTTFLTVIGYQSITVSGSSSSSVTLP LYLDFYLTLDVSGSMGLPSTSAEAQRMQAISPDNYRQYPTGCTLACHFSPQNSACTDSGTQGYPTNNYCLGYAISRVSQS GYKSLLTTNKNNPKGVQLPSSIVSGLPNSLYNKLPTVANCPTDGTDDCIQLRLDAVGYAVNQLFTTANTTKKVANQFRIG LYPFIRYLYSYYPLTTNISGSTSDSSTINYAAANLATLLDTNTNASLGSGGTHIDTALSSVNSLITSVGDGSATTNTLPY VFLVTDGAQDPQVKGVPNGSWSGSNHATTINPTTSCTPLKNRGIIISVLYIPYQTINPVNASFAGDEDDYANNNIPNIPP SLQACASPGFFYTANTPADITSALNAMFNHAVSEAHLTR
Sequences:
>Translated_519_residues MGINGPKSRATALVARFVGDSKANIATTFALALLPILTAIGCGTDYSMAMRLKVKLQSAADAASIASISVNSAGYAAAMA MTSDGSVTAGVNEADNIFKGNASTFGGYTLTSETSTVTKTRSTLSSQVQFTAAVPTTFLTVIGYQSITVSGSSSSSVTLP LYLDFYLTLDVSGSMGLPSTSAEAQRMQAISPDNYRQYPTGCTLACHFSPQNSACTDSGTQGYPTNNYCLGYAISRVSQS GYKSLLTTNKNNPKGVQLPSSIVSGLPNSLYNKLPTVANCPTDGTDDCIQLRLDAVGYAVNQLFTTANTTKKVANQFRIG LYPFIRYLYSYYPLTTNISGSTSDSSTINYAAANLATLLDTNTNASLGSGGTHIDTALSSVNSLITSVGDGSATTNTLPY VFLVTDGAQDPQVKGVPNGSWSGSNHATTINPTTSCTPLKNRGIIISVLYIPYQTINPVNASFAGDEDDYANNNIPNIPP SLQACASPGFFYTANTPADITSALNAMFNHAVSEAHLTR >Mature_518_residues GINGPKSRATALVARFVGDSKANIATTFALALLPILTAIGCGTDYSMAMRLKVKLQSAADAASIASISVNSAGYAAAMAM TSDGSVTAGVNEADNIFKGNASTFGGYTLTSETSTVTKTRSTLSSQVQFTAAVPTTFLTVIGYQSITVSGSSSSSVTLPL YLDFYLTLDVSGSMGLPSTSAEAQRMQAISPDNYRQYPTGCTLACHFSPQNSACTDSGTQGYPTNNYCLGYAISRVSQSG YKSLLTTNKNNPKGVQLPSSIVSGLPNSLYNKLPTVANCPTDGTDDCIQLRLDAVGYAVNQLFTTANTTKKVANQFRIGL YPFIRYLYSYYPLTTNISGSTSDSSTINYAAANLATLLDTNTNASLGSGGTHIDTALSSVNSLITSVGDGSATTNTLPYV FLVTDGAQDPQVKGVPNGSWSGSNHATTINPTTSCTPLKNRGIIISVLYIPYQTINPVNASFAGDEDDYANNNIPNIPPS LQACASPGFFYTANTPADITSALNAMFNHAVSEAHLTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54292; Mature: 54161
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGINGPKSRATALVARFVGDSKANIATTFALALLPILTAIGCGTDYSMAMRLKVKLQSAA CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCC DAASIASISVNSAGYAAAMAMTSDGSVTAGVNEADNIFKGNASTFGGYTLTSETSTVTKT CCHHEEEEEECCCCCEEEEEEECCCCEEECCCCCCCEECCCCCCCCCEEEECCCCHHHHH RSTLSSQVQFTAAVPTTFLTVIGYQSITVSGSSSSSVTLPLYLDFYLTLDVSGSMGLPST HHHHHHCEEEEEHHHHHHHHHHCCEEEEEECCCCCEEEEEEEEEEEEEEEECCCCCCCCC SAEAQRMQAISPDNYRQYPTGCTLACHFSPQNSACTDSGTQGYPTNNYCLGYAISRVSQS CHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHH GYKSLLTTNKNNPKGVQLPSSIVSGLPNSLYNKLPTVANCPTDGTDDCIQLRLDAVGYAV HHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH NQLFTTANTTKKVANQFRIGLYPFIRYLYSYYPLTTNISGSTSDSSTINYAAANLATLLD HHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCEEECCCCCCCCCCEEEHHHHHHHHEEE TNTNASLGSGGTHIDTALSSVNSLITSVGDGSATTNTLPYVFLVTDGAQDPQVKGVPNGS CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC WSGSNHATTINPTTSCTPLKNRGIIISVLYIPYQTINPVNASFAGDEDDYANNNIPNIPP CCCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC SLQACASPGFFYTANTPADITSALNAMFNHAVSEAHLTR CHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GINGPKSRATALVARFVGDSKANIATTFALALLPILTAIGCGTDYSMAMRLKVKLQSAA CCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCC DAASIASISVNSAGYAAAMAMTSDGSVTAGVNEADNIFKGNASTFGGYTLTSETSTVTKT CCHHEEEEEECCCCCEEEEEEECCCCEEECCCCCCCEECCCCCCCCCEEEECCCCHHHHH RSTLSSQVQFTAAVPTTFLTVIGYQSITVSGSSSSSVTLPLYLDFYLTLDVSGSMGLPST HHHHHHCEEEEEHHHHHHHHHHCCEEEEEECCCCCEEEEEEEEEEEEEEEECCCCCCCCC SAEAQRMQAISPDNYRQYPTGCTLACHFSPQNSACTDSGTQGYPTNNYCLGYAISRVSQS CHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHH GYKSLLTTNKNNPKGVQLPSSIVSGLPNSLYNKLPTVANCPTDGTDDCIQLRLDAVGYAV HHHHHHHCCCCCCCCCCCCHHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH NQLFTTANTTKKVANQFRIGLYPFIRYLYSYYPLTTNISGSTSDSSTINYAAANLATLLD HHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCEEECCCCCCCCCCEEEHHHHHHHHEEE TNTNASLGSGGTHIDTALSSVNSLITSVGDGSATTNTLPYVFLVTDGAQDPQVKGVPNGS CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC WSGSNHATTINPTTSCTPLKNRGIIISVLYIPYQTINPVNASFAGDEDDYANNNIPNIPP CCCCCCEEEECCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC SLQACASPGFFYTANTPADITSALNAMFNHAVSEAHLTR CHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA