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The map label for this gene is tibC [H]

Identifier: 146343011

GI number: 146343011

Start: 6424627

End: 6425934

Strand: Reverse

Name: tibC [H]

Synonym: BRADO6196

Alternate gene names: 146343011

Gene position: 6425934-6424627 (Counterclockwise)

Preceding gene: 146343012

Following gene: 146343010

Centisome position: 86.18

GC content: 53.59

Gene sequence:

>1308_bases
ATGGCAACGGAATTGAGTTTGGCCACAAGCTGGGACTCGAAACAGCAGCTCGCCCCTGCGGCGGAGCAGCATGCGGTCGA
TGAAGCGGTCCACGAAAAGACGGCGGAGGAGATCAATACCGTCCCGGGGACCGCAAAGCGACCCTATCCTGCGCCGGCGG
AATTGCCGACGCAGAAGGGCCCGAAAGGAATCCAGTTCGATTTCAACGATGGCTGTCGCGTTCTCGTTCCCGAAGCGAGA
CAGCCTTGGCGCGTTCGTCTCAGTGATCTCGAAACGGGAAACATTCTGTTCAATGCCGAACTCAAAGCAGGCCGAATCAA
TAGCACCAAGCGTTATTTTGTGCCGATCCGTATCGAGGTCTGGTCCGGTAGCGCCCAGGTTTTCATTCACGAATATTCAG
CAGAGGGACGAGATGTCCTGATTCAATTCCCCGTAGGTACTCTCGGAGACTCATTGGGCTGGTTTCCGTATGCCGCGAAG
TTCAAGGAAAAACACAGCTGCCGACTCACCTGTGCGATCGGCGAAAAGCTCATTCCTCTGCTGAAGCCAGCCTATCCTGA
CATCACGTTTCTGACGCACGAAGAGGTCAAGCCCGAACGCTATTACGCGACATATTCGATGGGATTGTTCTTCGACGACA
ACGAGTGCGTGCACCAGCCGTGTGACTTCCGGCTTGTTGGCTTGCATCGTACGTCAGGCTACATCCTCGGGGTCGACCCA
GAGGAGACGCCACCATCGATTCGCTTGGAAGACGCTAGTCGACCAATTCCCGAACGGTACGTCTGTATTGCAGTTCAGAG
TACTACACAGTGTAAATATTGGAATAATCCATATGGTTGGAACGAAATTGTCTCCTTCTTGAAAGCTGCAGGGTATCGTG
TCATCTGCATCGACCAAAAGCCGATACATGGCAACGGACTGATATGGAACTACATTCCTCATGGTGCCGAGGATCAAACT
GGAGATCGGAGCCTCCAGGAGCGCGCCCGCTGGCTCAAGCATGCTGATTTCTTCATTGGCTTGTCAAGCGGACTTTCTTG
GCTAGCGTGGGCCTGCGAGGTCCCTGTCGTGCTCATCTCCGGATTTACTCATCCAACGAATGAGTTTTATACGCCGCATC
GGGTAATAAACTATCACGCATGCAACTCCTGCTGGAACGATGTGCGTGTTCGCTTCGATCATAACGATTTTATGTGGTGT
CCCCGTCATAAGGACACACCCCGCCAGTTCGAATGTACGCGGCTCATTACCGCTGATCAGGTGATGGCCGCCATACGTCG
AATTCCGAGCTTCACGTCACGACGCTAA

Upstream 100 bases:

>100_bases
CCGCGGCTTCGTTTCTGCGGCGCTCACGCAAGAAGCTAGCCATGATCAACGGACGCCGGCACAGATCGCCGCCTCGTGGA
ATGGATAAATTGGTCCAAAC

Downstream 100 bases:

>100_bases
TTGAGTGGCTCGATAGTTTGTTGGCAGAGGAGGAGACCGATATCGGCTTGACTGTCTGAAGCCTCCGGCGACGTGTGGGC
TGGCTATGGATCATAATACG

Product: putative glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MATELSLATSWDSKQQLAPAAEQHAVDEAVHEKTAEEINTVPGTAKRPYPAPAELPTQKGPKGIQFDFNDGCRVLVPEAR
QPWRVRLSDLETGNILFNAELKAGRINSTKRYFVPIRIEVWSGSAQVFIHEYSAEGRDVLIQFPVGTLGDSLGWFPYAAK
FKEKHSCRLTCAIGEKLIPLLKPAYPDITFLTHEEVKPERYYATYSMGLFFDDNECVHQPCDFRLVGLHRTSGYILGVDP
EETPPSIRLEDASRPIPERYVCIAVQSTTQCKYWNNPYGWNEIVSFLKAAGYRVICIDQKPIHGNGLIWNYIPHGAEDQT
GDRSLQERARWLKHADFFIGLSSGLSWLAWACEVPVVLISGFTHPTNEFYTPHRVINYHACNSCWNDVRVRFDHNDFMWC
PRHKDTPRQFECTRLITADQVMAAIRRIPSFTSRR

Sequences:

>Translated_435_residues
MATELSLATSWDSKQQLAPAAEQHAVDEAVHEKTAEEINTVPGTAKRPYPAPAELPTQKGPKGIQFDFNDGCRVLVPEAR
QPWRVRLSDLETGNILFNAELKAGRINSTKRYFVPIRIEVWSGSAQVFIHEYSAEGRDVLIQFPVGTLGDSLGWFPYAAK
FKEKHSCRLTCAIGEKLIPLLKPAYPDITFLTHEEVKPERYYATYSMGLFFDDNECVHQPCDFRLVGLHRTSGYILGVDP
EETPPSIRLEDASRPIPERYVCIAVQSTTQCKYWNNPYGWNEIVSFLKAAGYRVICIDQKPIHGNGLIWNYIPHGAEDQT
GDRSLQERARWLKHADFFIGLSSGLSWLAWACEVPVVLISGFTHPTNEFYTPHRVINYHACNSCWNDVRVRFDHNDFMWC
PRHKDTPRQFECTRLITADQVMAAIRRIPSFTSRR
>Mature_434_residues
ATELSLATSWDSKQQLAPAAEQHAVDEAVHEKTAEEINTVPGTAKRPYPAPAELPTQKGPKGIQFDFNDGCRVLVPEARQ
PWRVRLSDLETGNILFNAELKAGRINSTKRYFVPIRIEVWSGSAQVFIHEYSAEGRDVLIQFPVGTLGDSLGWFPYAAKF
KEKHSCRLTCAIGEKLIPLLKPAYPDITFLTHEEVKPERYYATYSMGLFFDDNECVHQPCDFRLVGLHRTSGYILGVDPE
ETPPSIRLEDASRPIPERYVCIAVQSTTQCKYWNNPYGWNEIVSFLKAAGYRVICIDQKPIHGNGLIWNYIPHGAEDQTG
DRSLQERARWLKHADFFIGLSSGLSWLAWACEVPVVLISGFTHPTNEFYTPHRVINYHACNSCWNDVRVRFDHNDFMWCP
RHKDTPRQFECTRLITADQVMAAIRRIPSFTSRR

Specific function: Glycosylates the tibA adhesin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: NA

Molecular weight: Translated: 49634; Mature: 49503

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATELSLATSWDSKQQLAPAAEQHAVDEAVHEKTAEEINTVPGTAKRPYPAPAELPTQKG
CCCEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PKGIQFDFNDGCRVLVPEARQPWRVRLSDLETGNILFNAELKAGRINSTKRYFVPIRIEV
CCCEEEECCCCCEEEECCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEEEEEE
WSGSAQVFIHEYSAEGRDVLIQFPVGTLGDSLGWFPYAAKFKEKHSCRLTCAIGEKLIPL
ECCCEEEEEEEECCCCCEEEEECCCHHCCCCCCCCCCHHHHCCCCCEEEEEECCHHHHHH
LKPAYPDITFLTHEEVKPERYYATYSMGLFFDDNECVHQPCDFRLVGLHRTSGYILGVDP
HCCCCCCEEEEECCCCCCCEEEEEEEEEEEECCCHHHCCCCCEEEEEEEECCCEEEECCC
EETPPSIRLEDASRPIPERYVCIAVQSTTQCKYWNNPYGWNEIVSFLKAAGYRVICIDQK
CCCCCCEEECCCCCCCCCCEEEEEEECCCEEEECCCCCCHHHHHHHHHHCCCEEEEEECC
PIHGNGLIWNYIPHGAEDQTGDRSLQERARWLKHADFFIGLSSGLSWLAWACEVPVVLIS
CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCEEEEE
GFTHPTNEFYTPHRVINYHACNSCWNDVRVRFDHNDFMWCPRHKDTPRQFECTRLITADQ
CCCCCCCCCCCCCCEEEEHHHHCCCCCEEEEECCCCEEECCCCCCCCCCEEEEEEECHHH
VMAAIRRIPSFTSRR
HHHHHHHCCCCCCCC
>Mature Secondary Structure 
ATELSLATSWDSKQQLAPAAEQHAVDEAVHEKTAEEINTVPGTAKRPYPAPAELPTQKG
CCEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PKGIQFDFNDGCRVLVPEARQPWRVRLSDLETGNILFNAELKAGRINSTKRYFVPIRIEV
CCCEEEECCCCCEEEECCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEEEEEE
WSGSAQVFIHEYSAEGRDVLIQFPVGTLGDSLGWFPYAAKFKEKHSCRLTCAIGEKLIPL
ECCCEEEEEEEECCCCCEEEEECCCHHCCCCCCCCCCHHHHCCCCCEEEEEECCHHHHHH
LKPAYPDITFLTHEEVKPERYYATYSMGLFFDDNECVHQPCDFRLVGLHRTSGYILGVDP
HCCCCCCEEEEECCCCCCCEEEEEEEEEEEECCCHHHCCCCCEEEEEEEECCCEEEECCC
EETPPSIRLEDASRPIPERYVCIAVQSTTQCKYWNNPYGWNEIVSFLKAAGYRVICIDQK
CCCCCCEEECCCCCCCCCCEEEEEEECCCEEEECCCCCCHHHHHHHHHHCCCEEEEEECC
PIHGNGLIWNYIPHGAEDQTGDRSLQERARWLKHADFFIGLSSGLSWLAWACEVPVVLIS
CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCEEEEE
GFTHPTNEFYTPHRVINYHACNSCWNDVRVRFDHNDFMWCPRHKDTPRQFECTRLITADQ
CCCCCCCCCCCCCCEEEEHHHHCCCCCEEEEECCCCEEECCCCCCCCCCEEEEEEECHHH
VMAAIRRIPSFTSRR
HHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10417177 [H]