| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is zraS [C]
Identifier: 146342688
GI number: 146342688
Start: 6072349
End: 6074934
Strand: Reverse
Name: zraS [C]
Synonym: BRADO5855
Alternate gene names: 146342688
Gene position: 6074934-6072349 (Counterclockwise)
Preceding gene: 146342689
Following gene: 146342687
Centisome position: 81.47
GC content: 67.05
Gene sequence:
>2586_bases ATGTTGGACCCAACCACAACGATTGCCGACCATCGGCGTGGCTCGCGACGAGACGGCATTGTCCGTGCCCTGATCCGCCG CGCGCCGCGGTTCGGGATGAGACGCCGCTGGACGCCGCGGATCATCGTGCTGAGTGGTCTGGTCGTCGCCCTGCTGTGTG ACGCCTTCGTCGCGCACATGCTGTTCGTCAATCATCGGGAGACGTACCGGGCGACCGAGGCGGCCAATGGCGACCTTGCC CGCGCGCTCGAAGAATACATGCTGCGCAACATCCAGGGCGTCGAGCTGCTGTTGAGCACCACCATCGACAGCCTGCAGCG CAACCCGTCGCTGCTCACCCGCGGAAATCCCGCGCTCGTCAGTGAGCTCAAGCGCAGGGTGGCGCCGTATCCCGTCGCCG GCGGCATCGCGGTTCTCGACGCCGAGGGCAACCTGCTCGGCGACAGCGAGGGGAACGGCGGTCCGGGCCGCGAGAACAAT TTCGCCGATCGGGCCTATTTCAAGGTCCAGCGCGACGACCCGGACCATGGTCTTTTCATCGACGTTCCGGTTGCCGCGCG CGTCAACACCGGTCTGTTCATCGCGATGAGCCGCGCCTTCGTCATGCCGGACGGGCGCTTCGCAGGCGTCGTGTTCGTGC CGGTCGACTACGAGAATCTCCGGCAGTTCTTCCTGTCGCTCAATGTGGGGCAGCGCGGCACCGTGACGCTGTATCGCGAC GACGGCACGATCCTGCTGCGGACGCCGAACGCTGACGCGTTTGCCGGCCGCAACCTTCGCTCCAATCGCCTGTTCACGCA ATTTCTCCCGCTCGCCCCTTACGGAAGCTTCGAAGGCAGCGGCGTCACCGACGGGGTGTCCCGCAGCATCAGCTATCGGC GCGTCGCCGGCCTGCCGCTCGTCGTCACCGTGGCGCGCCATCCGGTGGAGTATCTGGCGGGGTGGAAGAACAACGCGCTG TACTACAGCGCGGTTGCCGCCGGGCTCAATCTGCTGATCGTCGGATTCGGCTTCAGCCTCGCGCGGCAATGGCAGCTGCG CGCGGCGTCCGAACAGGCGGTGCGGGACAATCTGGAGCAGTATCAGCTGGTGACCGAGAACGTGCCCGCGCTGATCGTGC GGGTCGGCGCCGACGGCCGCATCCGCTTCGCCAACCGCGTCGCGCGGGAGTGGTATGCCCAGGCTCCGGCGCAGGCCATC CGCAGCCGCAAGGTCGACGATTTCATCGATCCGCTGCGGGCCGGAGAGGCGAGGCTGAAGATCGAGTCGGCGTTGGCCGG ACGCGCTATGCGCGGCGAGGAGAAGATCACCTTTCCCGACGGTCGCGAGCGCTGGTGCGAGACCATCCGGGTGCCCGACC GCGCCCAGGACGGCACGGTGCGCGGCTATGTCGTGCTGTCGGTCGACATCACCGAGCGCAAACGCATCGAGGATGAGTTG CGCCAGGCGCAGAAGATGGATGCCATCGGCCAACTGGCCGGCGGCATCGCGCACGACTCCAACAACATGCTGGCGGCGAC GCTCGGCAATCTCGATCTTCTGCTCGACACGTTGCCGCCGGGCGAGGCCGCCTCGCGCGGCATGGCCGAGCGGGCGATCG AGGCAGCCGAACGGGTCGCCGATCTCAACCGGCGCCTGCTCGCCTTCGCGCGCAAGCAGACGCTGCAGCCGCAGATCACC GACGTCAATCAGCTGGTCGGCGGCATGACGACGATCCTTCAGCGGACGCTCGGCGAGACCATCGCGATCGAGCTGGTGCA GGATCCGGACTTGTGGCACTGCCTGATCGATCCCACGCAACTGCAGAACGCGCTGCTGAATCTCGCCCTCAACGCGCGCG ATGCGATGCCCGGAGGCGGACGGCTCACGATCACGACCGCGAATGCCGTGCTCGCTCAGCCGCTCGACGACGGCGACGAG CGCATCGACGCCGGCGACTACGTGACGATCGCGGTATCGGACAAGGGCGCCGGCATGACGCCCGACATCGTGCGCCGCGC CTTCGAGCCGTTCTTCACCACCAAGGAGTTCGGCAAGGGGAGCGGGCTCGGGCTGAGCATGGTCTACGGCTTTGCGAGGC AGTCCGGCGGCACGGTGGTGATCGCGAGCCGGGTGGCGGAAGGCACCCGCGTCACGCTCTATCTGCCGAGCGCAGGACCG GCGCTGATCGAGCGGACGAATCCCGGAGCATCGCGCCCGCCGCGGCCTGAGACGGCCGAACGGATTCTCGTCGTTGAGGA CAATGTCCTGGTCGGCGCCATGGCCTCCACCATGCTGTCCGCGATGGGATACGATCCCGTCGTGGTGATCAATGCGACCA TGGCGATCGCTGAACTGGAACGGCGGGGGCCGTTCTCGCTCATGCTGACGGATATCGTCCTGCCCGGCGACATGACCGGA ATCGACCTCGCGCGCCAAGTGCGGGGCAGGTGGCCCGGCCTGCCCATCATCTTCATGTCCGGTTTCGCGGATCCCTCGCT GGTGCCCGAGGACTTTCGCGCCACCACCACGCTTCTCGCCAAGCCGTTTCGCCTCGGTCAATTGTCCGACGCGATCGTGT TGGCGCTGGCTCCGGCAAGGAACTGA
Upstream 100 bases:
>100_bases GGCTCGGCAAGACGTCCGGAGATTGGCGGGAGTTGGGCTGAGACTCCCGGGGACCCATCGCCGGGGAATCGGCTCGACGC TTTCCTGAAGTTCTGCGCTG
Downstream 100 bases:
>100_bases CACGCGCCGGTGGACCGGTCGGCACGTCATGGCCAGCGCGGTTTCCGCTCGGACCGTTTGTGTGCGCTGCAGGAGAGTCC CTCTTCGTTGTTCGAGAAGG
Product: putative two-component sensor histidine kinase
Products: NA
Alternate protein names: Blue-light-activated histidine kinase; Response regulator [H]
Number of amino acids: Translated: 861; Mature: 861
Protein sequence:
>861_residues MLDPTTTIADHRRGSRRDGIVRALIRRAPRFGMRRRWTPRIIVLSGLVVALLCDAFVAHMLFVNHRETYRATEAANGDLA RALEEYMLRNIQGVELLLSTTIDSLQRNPSLLTRGNPALVSELKRRVAPYPVAGGIAVLDAEGNLLGDSEGNGGPGRENN FADRAYFKVQRDDPDHGLFIDVPVAARVNTGLFIAMSRAFVMPDGRFAGVVFVPVDYENLRQFFLSLNVGQRGTVTLYRD DGTILLRTPNADAFAGRNLRSNRLFTQFLPLAPYGSFEGSGVTDGVSRSISYRRVAGLPLVVTVARHPVEYLAGWKNNAL YYSAVAAGLNLLIVGFGFSLARQWQLRAASEQAVRDNLEQYQLVTENVPALIVRVGADGRIRFANRVAREWYAQAPAQAI RSRKVDDFIDPLRAGEARLKIESALAGRAMRGEEKITFPDGRERWCETIRVPDRAQDGTVRGYVVLSVDITERKRIEDEL RQAQKMDAIGQLAGGIAHDSNNMLAATLGNLDLLLDTLPPGEAASRGMAERAIEAAERVADLNRRLLAFARKQTLQPQIT DVNQLVGGMTTILQRTLGETIAIELVQDPDLWHCLIDPTQLQNALLNLALNARDAMPGGGRLTITTANAVLAQPLDDGDE RIDAGDYVTIAVSDKGAGMTPDIVRRAFEPFFTTKEFGKGSGLGLSMVYGFARQSGGTVVIASRVAEGTRVTLYLPSAGP ALIERTNPGASRPPRPETAERILVVEDNVLVGAMASTMLSAMGYDPVVVINATMAIAELERRGPFSLMLTDIVLPGDMTG IDLARQVRGRWPGLPIIFMSGFADPSLVPEDFRATTTLLAKPFRLGQLSDAIVLALAPARN
Sequences:
>Translated_861_residues MLDPTTTIADHRRGSRRDGIVRALIRRAPRFGMRRRWTPRIIVLSGLVVALLCDAFVAHMLFVNHRETYRATEAANGDLA RALEEYMLRNIQGVELLLSTTIDSLQRNPSLLTRGNPALVSELKRRVAPYPVAGGIAVLDAEGNLLGDSEGNGGPGRENN FADRAYFKVQRDDPDHGLFIDVPVAARVNTGLFIAMSRAFVMPDGRFAGVVFVPVDYENLRQFFLSLNVGQRGTVTLYRD DGTILLRTPNADAFAGRNLRSNRLFTQFLPLAPYGSFEGSGVTDGVSRSISYRRVAGLPLVVTVARHPVEYLAGWKNNAL YYSAVAAGLNLLIVGFGFSLARQWQLRAASEQAVRDNLEQYQLVTENVPALIVRVGADGRIRFANRVAREWYAQAPAQAI RSRKVDDFIDPLRAGEARLKIESALAGRAMRGEEKITFPDGRERWCETIRVPDRAQDGTVRGYVVLSVDITERKRIEDEL RQAQKMDAIGQLAGGIAHDSNNMLAATLGNLDLLLDTLPPGEAASRGMAERAIEAAERVADLNRRLLAFARKQTLQPQIT DVNQLVGGMTTILQRTLGETIAIELVQDPDLWHCLIDPTQLQNALLNLALNARDAMPGGGRLTITTANAVLAQPLDDGDE RIDAGDYVTIAVSDKGAGMTPDIVRRAFEPFFTTKEFGKGSGLGLSMVYGFARQSGGTVVIASRVAEGTRVTLYLPSAGP ALIERTNPGASRPPRPETAERILVVEDNVLVGAMASTMLSAMGYDPVVVINATMAIAELERRGPFSLMLTDIVLPGDMTG IDLARQVRGRWPGLPIIFMSGFADPSLVPEDFRATTTLLAKPFRLGQLSDAIVLALAPARN >Mature_861_residues MLDPTTTIADHRRGSRRDGIVRALIRRAPRFGMRRRWTPRIIVLSGLVVALLCDAFVAHMLFVNHRETYRATEAANGDLA RALEEYMLRNIQGVELLLSTTIDSLQRNPSLLTRGNPALVSELKRRVAPYPVAGGIAVLDAEGNLLGDSEGNGGPGRENN FADRAYFKVQRDDPDHGLFIDVPVAARVNTGLFIAMSRAFVMPDGRFAGVVFVPVDYENLRQFFLSLNVGQRGTVTLYRD DGTILLRTPNADAFAGRNLRSNRLFTQFLPLAPYGSFEGSGVTDGVSRSISYRRVAGLPLVVTVARHPVEYLAGWKNNAL YYSAVAAGLNLLIVGFGFSLARQWQLRAASEQAVRDNLEQYQLVTENVPALIVRVGADGRIRFANRVAREWYAQAPAQAI RSRKVDDFIDPLRAGEARLKIESALAGRAMRGEEKITFPDGRERWCETIRVPDRAQDGTVRGYVVLSVDITERKRIEDEL RQAQKMDAIGQLAGGIAHDSNNMLAATLGNLDLLLDTLPPGEAASRGMAERAIEAAERVADLNRRLLAFARKQTLQPQIT DVNQLVGGMTTILQRTLGETIAIELVQDPDLWHCLIDPTQLQNALLNLALNARDAMPGGGRLTITTANAVLAQPLDDGDE RIDAGDYVTIAVSDKGAGMTPDIVRRAFEPFFTTKEFGKGSGLGLSMVYGFARQSGGTVVIASRVAEGTRVTLYLPSAGP ALIERTNPGASRPPRPETAERILVVEDNVLVGAMASTMLSAMGYDPVVVINATMAIAELERRGPFSLMLTDIVLPGDMTG IDLARQVRGRWPGLPIIFMSGFADPSLVPEDFRATTTLLAKPFRLGQLSDAIVLALAPARN
Specific function: Photosensitive kinase and response regulator that is involved in increased bacterial virulence upon exposure to light [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=245, Percent_Identity=30.2040816326531, Blast_Score=112, Evalue=8e-26, Organism=Escherichia coli, GI48994928, Length=390, Percent_Identity=26.4102564102564, Blast_Score=101, Evalue=2e-22, Organism=Escherichia coli, GI1788549, Length=287, Percent_Identity=29.616724738676, Blast_Score=97, Evalue=5e-21, Organism=Escherichia coli, GI87081816, Length=244, Percent_Identity=29.5081967213115, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1790300, Length=348, Percent_Identity=27.5862068965517, Blast_Score=73, Evalue=6e-14, Organism=Escherichia coli, GI1788713, Length=399, Percent_Identity=23.3082706766917, Blast_Score=64, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 93967; Mature: 93967
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: PS50113 PAC ; PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDPTTTIADHRRGSRRDGIVRALIRRAPRFGMRRRWTPRIIVLSGLVVALLCDAFVAHM CCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHH LFVNHRETYRATEAANGDLARALEEYMLRNIQGVELLLSTTIDSLQRNPSLLTRGNPALV HHHCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCHHHH SELKRRVAPYPVAGGIAVLDAEGNLLGDSEGNGGPGRENNFADRAYFKVQRDDPDHGLFI HHHHHHCCCCCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEE DVPVAARVNTGLFIAMSRAFVMPDGRFAGVVFVPVDYENLRQFFLSLNVGQRGTVTLYRD EECCCEECCCCEEEEEECEEECCCCCEEEEEEEECCHHHHHHHHHHCCCCCCCEEEEEEC DGTILLRTPNADAFAGRNLRSNRLFTQFLPLAPYGSFEGSGVTDGVSRSISYRRVAGLPL CCEEEEECCCCCHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHHCCCCE VVTVARHPVEYLAGWKNNALYYSAVAAGLNLLIVGFGFSLARQWQLRAASEQAVRDNLEQ EEEEHHCCHHHHHCCCCCCEEHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH YQLVTENVPALIVRVGADGRIRFANRVAREWYAQAPAQAIRSRKVDDFIDPLRAGEARLK HHHHHCCCCEEEEEECCCCEEHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHCCCHHEE IESALAGRAMRGEEKITFPDGRERWCETIRVPDRAQDGTVRGYVVLSVDITERKRIEDEL EHHHHHCCCCCCCCCEECCCCHHHHHHHCCCCCCCCCCCEEEEEEEEEECHHHHHHHHHH RQAQKMDAIGQLAGGIAHDSNNMLAATLGNLDLLLDTLPPGEAASRGMAERAIEAAERVA HHHHHHHHHHHHHCCCEECCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH DLNRRLLAFARKQTLQPQITDVNQLVGGMTTILQRTLGETIAIELVQDPDLWHCLIDPTQ HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCHHH LQNALLNLALNARDAMPGGGRLTITTANAVLAQPLDDGDERIDAGDYVTIAVSDKGAGMT HHHHHHHHHCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCC PDIVRRAFEPFFTTKEFGKGSGLGLSMVYGFARQSGGTVVIASRVAEGTRVTLYLPSAGP HHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCC ALIERTNPGASRPPRPETAERILVVEDNVLVGAMASTMLSAMGYDPVVVINATMAIAELE EEEEECCCCCCCCCCCCCCCEEEEEECCEEHHHHHHHHHHHCCCCCEEEEECHHHHHHHH RRGPFSLMLTDIVLPGDMTGIDLARQVRGRWPGLPIIFMSGFADPSLVPEDFRATTTLLA HCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH KPFRLGQLSDAIVLALAPARN CCCCCCCCCCEEEEEEECCCC >Mature Secondary Structure MLDPTTTIADHRRGSRRDGIVRALIRRAPRFGMRRRWTPRIIVLSGLVVALLCDAFVAHM CCCCCCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHH LFVNHRETYRATEAANGDLARALEEYMLRNIQGVELLLSTTIDSLQRNPSLLTRGNPALV HHHCCCHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCHHHH SELKRRVAPYPVAGGIAVLDAEGNLLGDSEGNGGPGRENNFADRAYFKVQRDDPDHGLFI HHHHHHCCCCCCCCCEEEEECCCCEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEE DVPVAARVNTGLFIAMSRAFVMPDGRFAGVVFVPVDYENLRQFFLSLNVGQRGTVTLYRD EECCCEECCCCEEEEEECEEECCCCCEEEEEEEECCHHHHHHHHHHCCCCCCCEEEEEEC DGTILLRTPNADAFAGRNLRSNRLFTQFLPLAPYGSFEGSGVTDGVSRSISYRRVAGLPL CCEEEEECCCCCHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHHCCCCE VVTVARHPVEYLAGWKNNALYYSAVAAGLNLLIVGFGFSLARQWQLRAASEQAVRDNLEQ EEEEHHCCHHHHHCCCCCCEEHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH YQLVTENVPALIVRVGADGRIRFANRVAREWYAQAPAQAIRSRKVDDFIDPLRAGEARLK HHHHHCCCCEEEEEECCCCEEHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHCCCHHEE IESALAGRAMRGEEKITFPDGRERWCETIRVPDRAQDGTVRGYVVLSVDITERKRIEDEL EHHHHHCCCCCCCCCEECCCCHHHHHHHCCCCCCCCCCCEEEEEEEEEECHHHHHHHHHH RQAQKMDAIGQLAGGIAHDSNNMLAATLGNLDLLLDTLPPGEAASRGMAERAIEAAERVA HHHHHHHHHHHHHCCCEECCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHH DLNRRLLAFARKQTLQPQITDVNQLVGGMTTILQRTLGETIAIELVQDPDLWHCLIDPTQ HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCHHH LQNALLNLALNARDAMPGGGRLTITTANAVLAQPLDDGDERIDAGDYVTIAVSDKGAGMT HHHHHHHHHCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCC PDIVRRAFEPFFTTKEFGKGSGLGLSMVYGFARQSGGTVVIASRVAEGTRVTLYLPSAGP HHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCC ALIERTNPGASRPPRPETAERILVVEDNVLVGAMASTMLSAMGYDPVVVINATMAIAELE EEEEECCCCCCCCCCCCCCCEEEEEECCEEHHHHHHHHHHHCCCCCEEEEECHHHHHHHH RRGPFSLMLTDIVLPGDMTGIDLARQVRGRWPGLPIIFMSGFADPSLVPEDFRATTTLLA HCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHH KPFRLGQLSDAIVLALAPARN CCCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA