| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342424
Identifier: 146342424
GI number: 146342424
Start: 5766925
End: 5767491
Strand: Direct
Name: 146342424
Synonym: BRADO5583
Alternate gene names: NA
Gene position: 5766925-5767491 (Clockwise)
Preceding gene: 146342412
Following gene: 146342425
Centisome position: 77.34
GC content: 64.55
Gene sequence:
>567_bases ATGGCGACCGATCATATTCGATACGATGTGCTTGCGCGCGACGCGCTGCGCGGGGTTCTGCGCCGGGTTCTGACGGACGC CGCCACGCATGGCCTCCCCGGCGAGCATCATTTCTTCATCACCTTCGTATCCAAGGCCGAGGGCGTGAAGCTGTCGCCGC GGCTGCTCGCGCAATATCCCGACGAGATGACGATCATCCTGCAACACCAGTTCTGGGATCTGGTCGTGACCGAGGACCGG TTCGAGGTCGGCCTGTCGTTTGGCGGCATCCCTGAGCGCCTCGTGGTGCCCTTCCACGCCATCAAGAGCTTCTTCGATCC CTCGGTGCAGTTCGGCCTGCAGTTCGAGCCGTCGGAGGCGATCGCGGAAACCCCGGCTGCGCCGAAATTGCCGGCAGCTC CGATGCCGTCTGCCGTCCCGGCCATTCTTCCGACCTCGGCCGCCAAGACAAGTGATCAGACAAGCGACAAGGCAGGCGAC AACCTCGCTGACGACGAGCCGGCCCCTCCGCCGTCCTCGGGCGAAGGCGCTGAGGTGGTCCGCCTCGATCGATTCCGCAA GAAGTAG
Upstream 100 bases:
>100_bases CCGGAGTACGATGGGCCCGGATACGAGTCGCGGATGCTGCTGCCCGCGGCGCGGCATTCCGACGCGGGCGAAGCACGGCC CACACGACACAGGACCGACC
Downstream 100 bases:
>100_bases GCGCATTCGTCGCGCGCGGAACGGCCAGCGAGCCCATAGATTGACGCATGCTTGAACTGGCCCACGCCGGTTCGCGACCA ATCATGGGTATCCGACATGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MATDHIRYDVLARDALRGVLRRVLTDAATHGLPGEHHFFITFVSKAEGVKLSPRLLAQYPDEMTIILQHQFWDLVVTEDR FEVGLSFGGIPERLVVPFHAIKSFFDPSVQFGLQFEPSEAIAETPAAPKLPAAPMPSAVPAILPTSAAKTSDQTSDKAGD NLADDEPAPPPSSGEGAEVVRLDRFRKK
Sequences:
>Translated_188_residues MATDHIRYDVLARDALRGVLRRVLTDAATHGLPGEHHFFITFVSKAEGVKLSPRLLAQYPDEMTIILQHQFWDLVVTEDR FEVGLSFGGIPERLVVPFHAIKSFFDPSVQFGLQFEPSEAIAETPAAPKLPAAPMPSAVPAILPTSAAKTSDQTSDKAGD NLADDEPAPPPSSGEGAEVVRLDRFRKK >Mature_187_residues ATDHIRYDVLARDALRGVLRRVLTDAATHGLPGEHHFFITFVSKAEGVKLSPRLLAQYPDEMTIILQHQFWDLVVTEDRF EVGLSFGGIPERLVVPFHAIKSFFDPSVQFGLQFEPSEAIAETPAAPKLPAAPMPSAVPAILPTSAAKTSDQTSDKAGDN LADDEPAPPPSSGEGAEVVRLDRFRKK
Specific function: Unknown
COG id: COG3814
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20512; Mature: 20381
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATDHIRYDVLARDALRGVLRRVLTDAATHGLPGEHHFFITFVSKAEGVKLSPRLLAQYP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEECHHHHHHCC DEMTIILQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFHAIKSFFDPSVQFGLQFEPSEA CCEEEEEEECCEEEEEECCHHEECCCCCCCCHHHHHHHHHHHHHCCCCCEECEEECCHHH IAETPAAPKLPAAPMPSAVPAILPTSAAKTSDQTSDKAGDNLADDEPAPPPSSGEGAEVV HHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE RLDRFRKK EHHHHHCC >Mature Secondary Structure ATDHIRYDVLARDALRGVLRRVLTDAATHGLPGEHHFFITFVSKAEGVKLSPRLLAQYP CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEECHHHHHHCC DEMTIILQHQFWDLVVTEDRFEVGLSFGGIPERLVVPFHAIKSFFDPSVQFGLQFEPSEA CCEEEEEEECCEEEEEECCHHEECCCCCCCCHHHHHHHHHHHHHCCCCCEECEEECCHHH IAETPAAPKLPAAPMPSAVPAILPTSAAKTSDQTSDKAGDNLADDEPAPPPSSGEGAEVV HHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE RLDRFRKK EHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA