| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is chrA1 [H]
Identifier: 146342422
GI number: 146342422
Start: 5765071
End: 5765604
Strand: Reverse
Name: chrA1 [H]
Synonym: BRADO5581
Alternate gene names: 146342422
Gene position: 5765604-5765071 (Counterclockwise)
Preceding gene: 146342423
Following gene: 146342421
Centisome position: 77.32
GC content: 65.17
Gene sequence:
>534_bases ATGAGCGGCGATGACAATCCGCTGTTCCAGCTGTTCTGGACGTTCGCCCTGATTTCGCTGTTCGCGGTCGGCGGCGCCGT CGCCGCCATTCCGGAATTGCATCGTATCGCGGTCGACGTCCAGCACTGGATGACCGACAAGCAATTCGCCGACGTGTTCG CGCTGTCGCAATTGTCGCCCGGTCCCAACGTTCTGATCGTCACGCTGATCGGCTACTCGGTCGCAGGCGTCGCAGGTGCG GCAGTTGCAACGATCGCAATGTGCGGTCCGACGGCCGTTCTCACCTACCTCGTCAGCCGCTGGCTCTCCAATGCGCATGG TGCGCGCTGGCCCGCGATGGTGCAATCGGCCCTGGTGCCGCTCTCGATCGGCCTGATGGCCGCGAGCGGCTGGATTCTCG GGCTGTCGTCCGACCAGTCATGGCGCGCGGTTGCGCTCACCGTCATCGCGGCCGTGATTGCCTCCGTCACGCGGCTCAAT CCGCTGTGGCTGTTGGCGGCGGGCGGCTGTCTCGGTTTCGCTGGCCTTCTCTAG
Upstream 100 bases:
>100_bases TCATCGCCATCGGACTGGCTCGGCTGCCGCTTCAGGCGGTGCTCCTGGTCGCCGTGCCACTGAGCCTTGCCGTCACCTTC GCGAAGGCAAGGTGGGTGCG
Downstream 100 bases:
>100_bases GGAAAGCCGTTAGGCAAAATGAACGCGGGTCCGGCGCTTGCCGGGCCGGCCAAACGAAAACAATCCCGGCCATCAAGGCC GATCGGGGAGGGCGAGGACA
Product: chromate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MSGDDNPLFQLFWTFALISLFAVGGAVAAIPELHRIAVDVQHWMTDKQFADVFALSQLSPGPNVLIVTLIGYSVAGVAGA AVATIAMCGPTAVLTYLVSRWLSNAHGARWPAMVQSALVPLSIGLMAASGWILGLSSDQSWRAVALTVIAAVIASVTRLN PLWLLAAGGCLGFAGLL
Sequences:
>Translated_177_residues MSGDDNPLFQLFWTFALISLFAVGGAVAAIPELHRIAVDVQHWMTDKQFADVFALSQLSPGPNVLIVTLIGYSVAGVAGA AVATIAMCGPTAVLTYLVSRWLSNAHGARWPAMVQSALVPLSIGLMAASGWILGLSSDQSWRAVALTVIAAVIASVTRLN PLWLLAAGGCLGFAGLL >Mature_176_residues SGDDNPLFQLFWTFALISLFAVGGAVAAIPELHRIAVDVQHWMTDKQFADVFALSQLSPGPNVLIVTLIGYSVAGVAGAA VATIAMCGPTAVLTYLVSRWLSNAHGARWPAMVQSALVPLSIGLMAASGWILGLSSDQSWRAVALTVIAAVIASVTRLNP LWLLAAGGCLGFAGLL
Specific function: This protein reduces chromate accumulation and is essential for chromate resistance [H]
COG id: COG2059
COG function: function code P; Chromate transport protein ChrA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003370 - InterPro: IPR014047 [H]
Pfam domain/function: PF02417 Chromate_transp [H]
EC number: NA
Molecular weight: Translated: 18430; Mature: 18299
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGDDNPLFQLFWTFALISLFAVGGAVAAIPELHRIAVDVQHWMTDKQFADVFALSQLSP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCC GPNVLIVTLIGYSVAGVAGAAVATIAMCGPTAVLTYLVSRWLSNAHGARWPAMVQSALVP CCCEEEEHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LSIGLMAASGWILGLSSDQSWRAVALTVIAAVIASVTRLNPLWLLAAGGCLGFAGLL HHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHEEECCCHHHHHCCC >Mature Secondary Structure SGDDNPLFQLFWTFALISLFAVGGAVAAIPELHRIAVDVQHWMTDKQFADVFALSQLSP CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCC GPNVLIVTLIGYSVAGVAGAAVATIAMCGPTAVLTYLVSRWLSNAHGARWPAMVQSALVP CCCEEEEHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LSIGLMAASGWILGLSSDQSWRAVALTVIAAVIASVTRLNPLWLLAAGGCLGFAGLL HHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHEEECCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2180932; 12471500 [H]