| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is mxaF' [H]
Identifier: 146342329
GI number: 146342329
Start: 5665479
End: 5667281
Strand: Direct
Name: mxaF' [H]
Synonym: BRADO5484
Alternate gene names: 146342329
Gene position: 5665479-5667281 (Clockwise)
Preceding gene: 146342327
Following gene: 146342330
Centisome position: 75.98
GC content: 62.95
Gene sequence:
>1803_bases ATGCGAAGAGTGCTACTCGCAACATGTCTGACGTCAGTCGCGGCGCTCGCCGCGGGTGGCGCATTTGCCAGCGAAGAGCT GGTCAAGATGTCGGCCAACCCGAAGGACTGGGTGATGCCGGCCGGCGACTACGCCAACACGCGCTACTCCAAGCTCAACC AGATCAACGCCCAGAATGTCGGCAAGCTGCAGGTCGCGTGGACCTTCTCCACCGGCGTGCTGCGCGGCCATGAAGGCGGC CCGCTCATCGTCGGCAACATGATGTATGTGCATACGCCCTTCCCTAATAAGGTGTATGCGCTGGATCTGGCCAACGACAA CAAGATCGTCTGGAAGTACGAGCCCAAGCAGGATCCGAACGTCATTCCGGTGATGTGCTGCGACACGGTGAATCGCGGCG TCGCCTATGGTGACGGCAAGATCTTCCTGCATCAGGCCGACGACAAGCTCGTCGCGATCGACGCCAAGACCGGCCAGCAT GTCTGGACCGCGGTCAATGGTGATCCGAGCAAGGGCCAGACCGGCACCTCGGCTCCGCTCGTGGTGAAGGACAAGGTTCT GGTCGGCACGTCCGGCGGCGAGTTCGGCGTCCAGTGCAGCATGACCGCTTACGATATCAAGAGCGGCAAGCAGGTCTGGA AGGCCTATTCGGAAGGTCCGGACGATCAGATCCTGTTCGACGCGAACACCACCTCGCTCGGCAAGCCGGTCGGAAAGGAT TCGAGCCTCAAGACCTGGCAGGGCGATCAGTGGAAGACCGGCGGCGGCTGCACCTGGGGCTGGGTCTCCTACGATCCGCA GCTCGACATGGTGTATTACGGCTCGGGCAACCCCTCGACCTGGAATCCGAAGCAGCGTCCGGGCGACAACAAATGGTCGA TGACGATCTTCGCCCGCGCGGCCGATACCGGCGTGGCGAAGTGGGTCTATCAGATGACGCCCCACGACGAGTGGGACTAT GACGGCGTCAACGAGATGATCCTGTCGGACCAGTCGATCAACGGCCAGCCGCGCAAGCTGCTGACGCATTTCGATCGTAA CGGCCTCGCCTATACGCTCGATCGCGCCAATGGCGAACTGCTCGTCGCCGAGAAGTACGATCCGAAGGTGAACTGGACCT CCGGCGTCGACATGGACAAGAATTCTGCGACCTACGGCCGTCCGAAGGTTCTCGACCAGTACTCGACCGACAAGCAGGGC GAGGACGTCAACACCAAGGGCATCTGCCCGGCCGCGCTCGGCACCAAGGACGAGCAGCCGGCGGCCTACTCGCCGGATAC GCAGCTGTTCTACGTGCCGACCAACCATGTCTGCATGGACTATGAGCCCTTCAAGGTGAGCTACACCGCAGGTCAGCCCT ATGTCGGCGCGACGCTTTCGATGTATCCGCCCCAGGGTGAGACCAACATGGGCAACTTCATCGCCTGGGACGGCAAGACC GGCAAGATCGCCTGGTCGAACAAGGAGCCGTTCTCGGTGTGGTCGGGCGCCCTCGCAACGGCCGGCGGCGTGGTGTTCTA CGGCACGCTGGAAGGCTACCTCAAGGCGGTCGATGCCAAGACGGGCAAGGAGCTCTACAAGTTCAAGACTCCGTCCGGCA TCATCGGCAACGTCACGACCTATGAGGCCGGCGGCAAGCAGTATGTCGCGGTGCTGTCGGGTGTCGGTGGCTGGGCCGGC ATCGGCCTCGCGGCCGGCTTGACCGATCCGACGGCTGGTCTCGGCGCGGTCGGCGGCTATGCGGCGCTGAGCAACTACAC CGCTCTCGGCGGCGCGCTCACCGTGTTCTCGCTCCCGCAGTAA
Upstream 100 bases:
>100_bases TGGGCAAGTTTCCCGATCCGGAAGTGGATAATCAATGATGCCGAAAACGAATACTGGGCCGCGTGCTGCGGAACCTCAGT TGAACCCGGGAGGAAAGACG
Downstream 100 bases:
>100_bases GCCAGGTCCTCTGCTCCGGCGCATGGATGTCCTCCATGCGCCGGCTCGCCTACCCCAAAAAATTAAGGGAAAACGCCCTT GCGTAGAATCTGGTTTGCGG
Product: methanol dehydrogenase large subunit-like protein
Products: aldehyde; reduced acceptor
Alternate protein names: NA
Number of amino acids: Translated: 600; Mature: 600
Protein sequence:
>600_residues MRRVLLATCLTSVAALAAGGAFASEELVKMSANPKDWVMPAGDYANTRYSKLNQINAQNVGKLQVAWTFSTGVLRGHEGG PLIVGNMMYVHTPFPNKVYALDLANDNKIVWKYEPKQDPNVIPVMCCDTVNRGVAYGDGKIFLHQADDKLVAIDAKTGQH VWTAVNGDPSKGQTGTSAPLVVKDKVLVGTSGGEFGVQCSMTAYDIKSGKQVWKAYSEGPDDQILFDANTTSLGKPVGKD SSLKTWQGDQWKTGGGCTWGWVSYDPQLDMVYYGSGNPSTWNPKQRPGDNKWSMTIFARAADTGVAKWVYQMTPHDEWDY DGVNEMILSDQSINGQPRKLLTHFDRNGLAYTLDRANGELLVAEKYDPKVNWTSGVDMDKNSATYGRPKVLDQYSTDKQG EDVNTKGICPAALGTKDEQPAAYSPDTQLFYVPTNHVCMDYEPFKVSYTAGQPYVGATLSMYPPQGETNMGNFIAWDGKT GKIAWSNKEPFSVWSGALATAGGVVFYGTLEGYLKAVDAKTGKELYKFKTPSGIIGNVTTYEAGGKQYVAVLSGVGGWAG IGLAAGLTDPTAGLGAVGGYAALSNYTALGGALTVFSLPQ
Sequences:
>Translated_600_residues MRRVLLATCLTSVAALAAGGAFASEELVKMSANPKDWVMPAGDYANTRYSKLNQINAQNVGKLQVAWTFSTGVLRGHEGG PLIVGNMMYVHTPFPNKVYALDLANDNKIVWKYEPKQDPNVIPVMCCDTVNRGVAYGDGKIFLHQADDKLVAIDAKTGQH VWTAVNGDPSKGQTGTSAPLVVKDKVLVGTSGGEFGVQCSMTAYDIKSGKQVWKAYSEGPDDQILFDANTTSLGKPVGKD SSLKTWQGDQWKTGGGCTWGWVSYDPQLDMVYYGSGNPSTWNPKQRPGDNKWSMTIFARAADTGVAKWVYQMTPHDEWDY DGVNEMILSDQSINGQPRKLLTHFDRNGLAYTLDRANGELLVAEKYDPKVNWTSGVDMDKNSATYGRPKVLDQYSTDKQG EDVNTKGICPAALGTKDEQPAAYSPDTQLFYVPTNHVCMDYEPFKVSYTAGQPYVGATLSMYPPQGETNMGNFIAWDGKT GKIAWSNKEPFSVWSGALATAGGVVFYGTLEGYLKAVDAKTGKELYKFKTPSGIIGNVTTYEAGGKQYVAVLSGVGGWAG IGLAAGLTDPTAGLGAVGGYAALSNYTALGGALTVFSLPQ >Mature_600_residues MRRVLLATCLTSVAALAAGGAFASEELVKMSANPKDWVMPAGDYANTRYSKLNQINAQNVGKLQVAWTFSTGVLRGHEGG PLIVGNMMYVHTPFPNKVYALDLANDNKIVWKYEPKQDPNVIPVMCCDTVNRGVAYGDGKIFLHQADDKLVAIDAKTGQH VWTAVNGDPSKGQTGTSAPLVVKDKVLVGTSGGEFGVQCSMTAYDIKSGKQVWKAYSEGPDDQILFDANTTSLGKPVGKD SSLKTWQGDQWKTGGGCTWGWVSYDPQLDMVYYGSGNPSTWNPKQRPGDNKWSMTIFARAADTGVAKWVYQMTPHDEWDY DGVNEMILSDQSINGQPRKLLTHFDRNGLAYTLDRANGELLVAEKYDPKVNWTSGVDMDKNSATYGRPKVLDQYSTDKQG EDVNTKGICPAALGTKDEQPAAYSPDTQLFYVPTNHVCMDYEPFKVSYTAGQPYVGATLSMYPPQGETNMGNFIAWDGKT GKIAWSNKEPFSVWSGALATAGGVVFYGTLEGYLKAVDAKTGKELYKFKTPSGIIGNVTTYEAGGKQYVAVLSGVGGWAG IGLAAGLTDPTAGLGAVGGYAALSNYTALGGALTVFSLPQ
Specific function: Gdh Is Probably Involved In Energy Conservation Rather Than In Sugar Metabolism. [C]
COG id: COG4993
COG function: function code G; Glucose dehydrogenase
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial PQQ dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1786316, Length=378, Percent_Identity=28.042328042328, Blast_Score=123, Evalue=4e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019556 - InterPro: IPR019551 - InterPro: IPR018391 - InterPro: IPR017512 - InterPro: IPR002372 - InterPro: IPR011047 - InterPro: IPR001479 [H]
Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]
EC number: 1.1.99.8
Molecular weight: Translated: 64632; Mature: 64632
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: PS00364 BACTERIAL_PQQ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVLLATCLTSVAALAAGGAFASEELVKMSANPKDWVMPAGDYANTRYSKLNQINAQNV CCHHHHHHHHHHHHHHHCCCCCCCCHHHEECCCCHHCEEECCCCCCCHHHHHHHCCCCCC GKLQVAWTFSTGVLRGHEGGPLIVGNMMYVHTPFPNKVYALDLANDNKIVWKYEPKQDPN CEEEEEEEEECCEEECCCCCCEEECCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCC VIPVMCCDTVNRGVAYGDGKIFLHQADDKLVAIDAKTGQHVWTAVNGDPSKGQTGTSAPL EEEEEEECCCCCCEEECCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCE VVKDKVLVGTSGGEFGVQCSMTAYDIKSGKQVWKAYSEGPDDQILFDANTTSLGKPVGKD EEECEEEEECCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC SSLKTWQGDQWKTGGGCTWGWVSYDPQLDMVYYGSGNPSTWNPKQRPGDNKWSMTIFARA CCCCCCCCCCEECCCCEEECEEEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEE ADTGVAKWVYQMTPHDEWDYDGVNEMILSDQSINGQPRKLLTHFDRNGLAYTLDRANGEL CCCCCEEEEEECCCCCCCCCCCCHHHEECCCCCCCCHHHHHHHHCCCCCEEEEECCCCCE LVAEKYDPKVNWTSGVDMDKNSATYGRPKVLDQYSTDKQGEDVNTKGICPAALGTKDEQP EEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCC AAYSPDTQLFYVPTNHVCMDYEPFKVSYTAGQPYVGATLSMYPPQGETNMGNFIAWDGKT CCCCCCCEEEEECCCCEEECCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCEEEECCCC GKIAWSNKEPFSVWSGALATAGGVVFYGTLEGYLKAVDAKTGKELYKFKTPSGIIGNVTT CEEEECCCCCHHHHCCHHHHCCCEEEEEEHHHHHHHHCCCCCCHHEEEECCCCCCCCEEE YEAGGKQYVAVLSGVGGWAGIGLAAGLTDPTAGLGAVGGYAALSNYTALGGALTVFSLPQ ECCCCCEEEEEEECCCCHHHHHEECCCCCCCCCCCCCCCHHHHHCCEECCCEEEEEECCC >Mature Secondary Structure MRRVLLATCLTSVAALAAGGAFASEELVKMSANPKDWVMPAGDYANTRYSKLNQINAQNV CCHHHHHHHHHHHHHHHCCCCCCCCHHHEECCCCHHCEEECCCCCCCHHHHHHHCCCCCC GKLQVAWTFSTGVLRGHEGGPLIVGNMMYVHTPFPNKVYALDLANDNKIVWKYEPKQDPN CEEEEEEEEECCEEECCCCCCEEECCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCC VIPVMCCDTVNRGVAYGDGKIFLHQADDKLVAIDAKTGQHVWTAVNGDPSKGQTGTSAPL EEEEEEECCCCCCEEECCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCE VVKDKVLVGTSGGEFGVQCSMTAYDIKSGKQVWKAYSEGPDDQILFDANTTSLGKPVGKD EEECEEEEECCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC SSLKTWQGDQWKTGGGCTWGWVSYDPQLDMVYYGSGNPSTWNPKQRPGDNKWSMTIFARA CCCCCCCCCCEECCCCEEECEEEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEE ADTGVAKWVYQMTPHDEWDYDGVNEMILSDQSINGQPRKLLTHFDRNGLAYTLDRANGEL CCCCCEEEEEECCCCCCCCCCCCHHHEECCCCCCCCHHHHHHHHCCCCCEEEEECCCCCE LVAEKYDPKVNWTSGVDMDKNSATYGRPKVLDQYSTDKQGEDVNTKGICPAALGTKDEQP EEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCC AAYSPDTQLFYVPTNHVCMDYEPFKVSYTAGQPYVGATLSMYPPQGETNMGNFIAWDGKT CCCCCCCEEEEECCCCEEECCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCEEEECCCC GKIAWSNKEPFSVWSGALATAGGVVFYGTLEGYLKAVDAKTGKELYKFKTPSGIIGNVTT CEEEECCCCCHHHHCCHHHHCCCEEEEEEHHHHHHHHCCCCCCHHEEEECCCCCCCCEEE YEAGGKQYVAVLSGVGGWAGIGLAAGLTDPTAGLGAVGGYAALSNYTALGGALTVFSLPQ ECCCCCEEEEEEECCCCHHHHHEECCCCCCCCCCCCCCCHHHHHCCEECCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: primary alcohol; acceptor
Specific reaction: a primary alcohol + acceptor = an aldehyde + reduced acceptor
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1657873 [H]