Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is mxaF' [H]

Identifier: 146342329

GI number: 146342329

Start: 5665479

End: 5667281

Strand: Direct

Name: mxaF' [H]

Synonym: BRADO5484

Alternate gene names: 146342329

Gene position: 5665479-5667281 (Clockwise)

Preceding gene: 146342327

Following gene: 146342330

Centisome position: 75.98

GC content: 62.95

Gene sequence:

>1803_bases
ATGCGAAGAGTGCTACTCGCAACATGTCTGACGTCAGTCGCGGCGCTCGCCGCGGGTGGCGCATTTGCCAGCGAAGAGCT
GGTCAAGATGTCGGCCAACCCGAAGGACTGGGTGATGCCGGCCGGCGACTACGCCAACACGCGCTACTCCAAGCTCAACC
AGATCAACGCCCAGAATGTCGGCAAGCTGCAGGTCGCGTGGACCTTCTCCACCGGCGTGCTGCGCGGCCATGAAGGCGGC
CCGCTCATCGTCGGCAACATGATGTATGTGCATACGCCCTTCCCTAATAAGGTGTATGCGCTGGATCTGGCCAACGACAA
CAAGATCGTCTGGAAGTACGAGCCCAAGCAGGATCCGAACGTCATTCCGGTGATGTGCTGCGACACGGTGAATCGCGGCG
TCGCCTATGGTGACGGCAAGATCTTCCTGCATCAGGCCGACGACAAGCTCGTCGCGATCGACGCCAAGACCGGCCAGCAT
GTCTGGACCGCGGTCAATGGTGATCCGAGCAAGGGCCAGACCGGCACCTCGGCTCCGCTCGTGGTGAAGGACAAGGTTCT
GGTCGGCACGTCCGGCGGCGAGTTCGGCGTCCAGTGCAGCATGACCGCTTACGATATCAAGAGCGGCAAGCAGGTCTGGA
AGGCCTATTCGGAAGGTCCGGACGATCAGATCCTGTTCGACGCGAACACCACCTCGCTCGGCAAGCCGGTCGGAAAGGAT
TCGAGCCTCAAGACCTGGCAGGGCGATCAGTGGAAGACCGGCGGCGGCTGCACCTGGGGCTGGGTCTCCTACGATCCGCA
GCTCGACATGGTGTATTACGGCTCGGGCAACCCCTCGACCTGGAATCCGAAGCAGCGTCCGGGCGACAACAAATGGTCGA
TGACGATCTTCGCCCGCGCGGCCGATACCGGCGTGGCGAAGTGGGTCTATCAGATGACGCCCCACGACGAGTGGGACTAT
GACGGCGTCAACGAGATGATCCTGTCGGACCAGTCGATCAACGGCCAGCCGCGCAAGCTGCTGACGCATTTCGATCGTAA
CGGCCTCGCCTATACGCTCGATCGCGCCAATGGCGAACTGCTCGTCGCCGAGAAGTACGATCCGAAGGTGAACTGGACCT
CCGGCGTCGACATGGACAAGAATTCTGCGACCTACGGCCGTCCGAAGGTTCTCGACCAGTACTCGACCGACAAGCAGGGC
GAGGACGTCAACACCAAGGGCATCTGCCCGGCCGCGCTCGGCACCAAGGACGAGCAGCCGGCGGCCTACTCGCCGGATAC
GCAGCTGTTCTACGTGCCGACCAACCATGTCTGCATGGACTATGAGCCCTTCAAGGTGAGCTACACCGCAGGTCAGCCCT
ATGTCGGCGCGACGCTTTCGATGTATCCGCCCCAGGGTGAGACCAACATGGGCAACTTCATCGCCTGGGACGGCAAGACC
GGCAAGATCGCCTGGTCGAACAAGGAGCCGTTCTCGGTGTGGTCGGGCGCCCTCGCAACGGCCGGCGGCGTGGTGTTCTA
CGGCACGCTGGAAGGCTACCTCAAGGCGGTCGATGCCAAGACGGGCAAGGAGCTCTACAAGTTCAAGACTCCGTCCGGCA
TCATCGGCAACGTCACGACCTATGAGGCCGGCGGCAAGCAGTATGTCGCGGTGCTGTCGGGTGTCGGTGGCTGGGCCGGC
ATCGGCCTCGCGGCCGGCTTGACCGATCCGACGGCTGGTCTCGGCGCGGTCGGCGGCTATGCGGCGCTGAGCAACTACAC
CGCTCTCGGCGGCGCGCTCACCGTGTTCTCGCTCCCGCAGTAA

Upstream 100 bases:

>100_bases
TGGGCAAGTTTCCCGATCCGGAAGTGGATAATCAATGATGCCGAAAACGAATACTGGGCCGCGTGCTGCGGAACCTCAGT
TGAACCCGGGAGGAAAGACG

Downstream 100 bases:

>100_bases
GCCAGGTCCTCTGCTCCGGCGCATGGATGTCCTCCATGCGCCGGCTCGCCTACCCCAAAAAATTAAGGGAAAACGCCCTT
GCGTAGAATCTGGTTTGCGG

Product: methanol dehydrogenase large subunit-like protein

Products: aldehyde; reduced acceptor

Alternate protein names: NA

Number of amino acids: Translated: 600; Mature: 600

Protein sequence:

>600_residues
MRRVLLATCLTSVAALAAGGAFASEELVKMSANPKDWVMPAGDYANTRYSKLNQINAQNVGKLQVAWTFSTGVLRGHEGG
PLIVGNMMYVHTPFPNKVYALDLANDNKIVWKYEPKQDPNVIPVMCCDTVNRGVAYGDGKIFLHQADDKLVAIDAKTGQH
VWTAVNGDPSKGQTGTSAPLVVKDKVLVGTSGGEFGVQCSMTAYDIKSGKQVWKAYSEGPDDQILFDANTTSLGKPVGKD
SSLKTWQGDQWKTGGGCTWGWVSYDPQLDMVYYGSGNPSTWNPKQRPGDNKWSMTIFARAADTGVAKWVYQMTPHDEWDY
DGVNEMILSDQSINGQPRKLLTHFDRNGLAYTLDRANGELLVAEKYDPKVNWTSGVDMDKNSATYGRPKVLDQYSTDKQG
EDVNTKGICPAALGTKDEQPAAYSPDTQLFYVPTNHVCMDYEPFKVSYTAGQPYVGATLSMYPPQGETNMGNFIAWDGKT
GKIAWSNKEPFSVWSGALATAGGVVFYGTLEGYLKAVDAKTGKELYKFKTPSGIIGNVTTYEAGGKQYVAVLSGVGGWAG
IGLAAGLTDPTAGLGAVGGYAALSNYTALGGALTVFSLPQ

Sequences:

>Translated_600_residues
MRRVLLATCLTSVAALAAGGAFASEELVKMSANPKDWVMPAGDYANTRYSKLNQINAQNVGKLQVAWTFSTGVLRGHEGG
PLIVGNMMYVHTPFPNKVYALDLANDNKIVWKYEPKQDPNVIPVMCCDTVNRGVAYGDGKIFLHQADDKLVAIDAKTGQH
VWTAVNGDPSKGQTGTSAPLVVKDKVLVGTSGGEFGVQCSMTAYDIKSGKQVWKAYSEGPDDQILFDANTTSLGKPVGKD
SSLKTWQGDQWKTGGGCTWGWVSYDPQLDMVYYGSGNPSTWNPKQRPGDNKWSMTIFARAADTGVAKWVYQMTPHDEWDY
DGVNEMILSDQSINGQPRKLLTHFDRNGLAYTLDRANGELLVAEKYDPKVNWTSGVDMDKNSATYGRPKVLDQYSTDKQG
EDVNTKGICPAALGTKDEQPAAYSPDTQLFYVPTNHVCMDYEPFKVSYTAGQPYVGATLSMYPPQGETNMGNFIAWDGKT
GKIAWSNKEPFSVWSGALATAGGVVFYGTLEGYLKAVDAKTGKELYKFKTPSGIIGNVTTYEAGGKQYVAVLSGVGGWAG
IGLAAGLTDPTAGLGAVGGYAALSNYTALGGALTVFSLPQ
>Mature_600_residues
MRRVLLATCLTSVAALAAGGAFASEELVKMSANPKDWVMPAGDYANTRYSKLNQINAQNVGKLQVAWTFSTGVLRGHEGG
PLIVGNMMYVHTPFPNKVYALDLANDNKIVWKYEPKQDPNVIPVMCCDTVNRGVAYGDGKIFLHQADDKLVAIDAKTGQH
VWTAVNGDPSKGQTGTSAPLVVKDKVLVGTSGGEFGVQCSMTAYDIKSGKQVWKAYSEGPDDQILFDANTTSLGKPVGKD
SSLKTWQGDQWKTGGGCTWGWVSYDPQLDMVYYGSGNPSTWNPKQRPGDNKWSMTIFARAADTGVAKWVYQMTPHDEWDY
DGVNEMILSDQSINGQPRKLLTHFDRNGLAYTLDRANGELLVAEKYDPKVNWTSGVDMDKNSATYGRPKVLDQYSTDKQG
EDVNTKGICPAALGTKDEQPAAYSPDTQLFYVPTNHVCMDYEPFKVSYTAGQPYVGATLSMYPPQGETNMGNFIAWDGKT
GKIAWSNKEPFSVWSGALATAGGVVFYGTLEGYLKAVDAKTGKELYKFKTPSGIIGNVTTYEAGGKQYVAVLSGVGGWAG
IGLAAGLTDPTAGLGAVGGYAALSNYTALGGALTVFSLPQ

Specific function: Gdh Is Probably Involved In Energy Conservation Rather Than In Sugar Metabolism. [C]

COG id: COG4993

COG function: function code G; Glucose dehydrogenase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial PQQ dehydrogenase family [H]

Homologues:

Organism=Escherichia coli, GI1786316, Length=378, Percent_Identity=28.042328042328, Blast_Score=123, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019556
- InterPro:   IPR019551
- InterPro:   IPR018391
- InterPro:   IPR017512
- InterPro:   IPR002372
- InterPro:   IPR011047
- InterPro:   IPR001479 [H]

Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]

EC number: 1.1.99.8

Molecular weight: Translated: 64632; Mature: 64632

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: PS00364 BACTERIAL_PQQ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVLLATCLTSVAALAAGGAFASEELVKMSANPKDWVMPAGDYANTRYSKLNQINAQNV
CCHHHHHHHHHHHHHHHCCCCCCCCHHHEECCCCHHCEEECCCCCCCHHHHHHHCCCCCC
GKLQVAWTFSTGVLRGHEGGPLIVGNMMYVHTPFPNKVYALDLANDNKIVWKYEPKQDPN
CEEEEEEEEECCEEECCCCCCEEECCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCC
VIPVMCCDTVNRGVAYGDGKIFLHQADDKLVAIDAKTGQHVWTAVNGDPSKGQTGTSAPL
EEEEEEECCCCCCEEECCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCE
VVKDKVLVGTSGGEFGVQCSMTAYDIKSGKQVWKAYSEGPDDQILFDANTTSLGKPVGKD
EEECEEEEECCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC
SSLKTWQGDQWKTGGGCTWGWVSYDPQLDMVYYGSGNPSTWNPKQRPGDNKWSMTIFARA
CCCCCCCCCCEECCCCEEECEEEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEE
ADTGVAKWVYQMTPHDEWDYDGVNEMILSDQSINGQPRKLLTHFDRNGLAYTLDRANGEL
CCCCCEEEEEECCCCCCCCCCCCHHHEECCCCCCCCHHHHHHHHCCCCCEEEEECCCCCE
LVAEKYDPKVNWTSGVDMDKNSATYGRPKVLDQYSTDKQGEDVNTKGICPAALGTKDEQP
EEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCC
AAYSPDTQLFYVPTNHVCMDYEPFKVSYTAGQPYVGATLSMYPPQGETNMGNFIAWDGKT
CCCCCCCEEEEECCCCEEECCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCEEEECCCC
GKIAWSNKEPFSVWSGALATAGGVVFYGTLEGYLKAVDAKTGKELYKFKTPSGIIGNVTT
CEEEECCCCCHHHHCCHHHHCCCEEEEEEHHHHHHHHCCCCCCHHEEEECCCCCCCCEEE
YEAGGKQYVAVLSGVGGWAGIGLAAGLTDPTAGLGAVGGYAALSNYTALGGALTVFSLPQ
ECCCCCEEEEEEECCCCHHHHHEECCCCCCCCCCCCCCCHHHHHCCEECCCEEEEEECCC
>Mature Secondary Structure
MRRVLLATCLTSVAALAAGGAFASEELVKMSANPKDWVMPAGDYANTRYSKLNQINAQNV
CCHHHHHHHHHHHHHHHCCCCCCCCHHHEECCCCHHCEEECCCCCCCHHHHHHHCCCCCC
GKLQVAWTFSTGVLRGHEGGPLIVGNMMYVHTPFPNKVYALDLANDNKIVWKYEPKQDPN
CEEEEEEEEECCEEECCCCCCEEECCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCC
VIPVMCCDTVNRGVAYGDGKIFLHQADDKLVAIDAKTGQHVWTAVNGDPSKGQTGTSAPL
EEEEEEECCCCCCEEECCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCE
VVKDKVLVGTSGGEFGVQCSMTAYDIKSGKQVWKAYSEGPDDQILFDANTTSLGKPVGKD
EEECEEEEECCCCCCCEEEEEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCC
SSLKTWQGDQWKTGGGCTWGWVSYDPQLDMVYYGSGNPSTWNPKQRPGDNKWSMTIFARA
CCCCCCCCCCEECCCCEEECEEEECCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEE
ADTGVAKWVYQMTPHDEWDYDGVNEMILSDQSINGQPRKLLTHFDRNGLAYTLDRANGEL
CCCCCEEEEEECCCCCCCCCCCCHHHEECCCCCCCCHHHHHHHHCCCCCEEEEECCCCCE
LVAEKYDPKVNWTSGVDMDKNSATYGRPKVLDQYSTDKQGEDVNTKGICPAALGTKDEQP
EEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCC
AAYSPDTQLFYVPTNHVCMDYEPFKVSYTAGQPYVGATLSMYPPQGETNMGNFIAWDGKT
CCCCCCCEEEEECCCCEEECCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCEEEECCCC
GKIAWSNKEPFSVWSGALATAGGVVFYGTLEGYLKAVDAKTGKELYKFKTPSGIIGNVTT
CEEEECCCCCHHHHCCHHHHCCCEEEEEEHHHHHHHHCCCCCCHHEEEECCCCCCCCEEE
YEAGGKQYVAVLSGVGGWAGIGLAAGLTDPTAGLGAVGGYAALSNYTALGGALTVFSLPQ
ECCCCCEEEEEEECCCCHHHHHEECCCCCCCCCCCCCCCHHHHHCCEECCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: primary alcohol; acceptor

Specific reaction: a primary alcohol + acceptor = an aldehyde + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1657873 [H]