| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146342322
Identifier: 146342322
GI number: 146342322
Start: 5659806
End: 5660114
Strand: Direct
Name: 146342322
Synonym: BRADO5477
Alternate gene names: NA
Gene position: 5659806-5660114 (Clockwise)
Preceding gene: 146342320
Following gene: 146342325
Centisome position: 75.9
GC content: 63.11
Gene sequence:
>309_bases ATGCCCAAGGTTCTCGTACTCTACAAGACCCCCAAGAGCGCCGAGGCGTTCGACAAGCACTACATGAACGTCCATGTACC GCTGGCGAAGAAGATCCCGGGCTTGAGGTCCTACGACATCAGCCGCGGGCCGGTGAACGGACCGGCAGGGGCGACCAACA TCCACCTTGTCGCCACTCTGGTGTTCGATTCGATGCAGTCCCTGCAGGCCGGCATGGGCTCGGCGGAGGGCAAGGCGGCG GCGGGAGATCTGCCGAACTTCGCGGACGGCGGTGTCGACCTCTACATCTTCGACACCCAGGACGTCTGA
Upstream 100 bases:
>100_bases GCTGACCCCTGCGAGGTCGCGGCGCTTGATCCAAGCCCGCAGATCGGCTGCAATGGGTACCGGTCGATCGACCTCAAAAA GACGAATGCGGAGGAAGCAG
Downstream 100 bases:
>100_bases CCGGCGCACCGTCGAGGCGTTCGGCCCGACAAGGATTGGATCTGCCAAGTCATCGGCGAACTGATCATTCGCAACGACTT GGCAGATCGCTACGGATTAC
Product: ethD like-protein
Products: NA
Alternate protein names: Ethyl Tert-Butyl Ether Degradation Protein; EthD Protein; Ethyl Tert-Butyl Ether Degradation Protein EthD; EthD Like-Protein
Number of amino acids: Translated: 102; Mature: 101
Protein sequence:
>102_residues MPKVLVLYKTPKSAEAFDKHYMNVHVPLAKKIPGLRSYDISRGPVNGPAGATNIHLVATLVFDSMQSLQAGMGSAEGKAA AGDLPNFADGGVDLYIFDTQDV
Sequences:
>Translated_102_residues MPKVLVLYKTPKSAEAFDKHYMNVHVPLAKKIPGLRSYDISRGPVNGPAGATNIHLVATLVFDSMQSLQAGMGSAEGKAA AGDLPNFADGGVDLYIFDTQDV >Mature_101_residues PKVLVLYKTPKSAEAFDKHYMNVHVPLAKKIPGLRSYDISRGPVNGPAGATNIHLVATLVFDSMQSLQAGMGSAEGKAAA GDLPNFADGGVDLYIFDTQDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10819; Mature: 10687
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKVLVLYKTPKSAEAFDKHYMNVHVPLAKKIPGLRSYDISRGPVNGPAGATNIHLVATL CCCEEEEEECCCCCHHHHHCCEEEEECHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH VFDSMQSLQAGMGSAEGKAAAGDLPNFADGGVDLYIFDTQDV HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC >Mature Secondary Structure PKVLVLYKTPKSAEAFDKHYMNVHVPLAKKIPGLRSYDISRGPVNGPAGATNIHLVATL CCEEEEEECCCCCHHHHHCCEEEEECHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHH VFDSMQSLQAGMGSAEGKAAAGDLPNFADGGVDLYIFDTQDV HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA