Click here to switch to the map view.

The map label for this gene is yqeB [H]

Identifier: 146342296

GI number: 146342296

Start: 5639268

End: 5640086

Strand: Direct

Name: yqeB [H]

Synonym: BRADO5451

Alternate gene names: 146342296

Gene position: 5639268-5640086 (Clockwise)

Preceding gene: 146342288

Following gene: 146342297

Centisome position: 75.63

GC content: 68.01

Gene sequence:

>819_bases
GTGCGCTTCGCCGTTGTCCTCGGGACCAACGACGTCGCCTCCGCAATCGCGGTGCATCTGCATCGCGAGGGCTTCTGCGT
GGTGTTGTCGCATGACCCCAACCCGCCGGTCATGCGGCGCAAGATGGCGTTTCACGACGCCCTCTTCGGCGACGCCGTGC
GTATCGAGAATGTGATCGGCGAGCGCATCGACAGCACGATGGACGTGTTCAAGGCACTCGGCGATCCCCAGCACGTCCTG
GTGACGCCGCTCGGCCTGCTCGATCTGCTGCCGGTCCGCGCCATCGATGTTCTGATCGATGCGCGAATGCAGACGCGCGA
GGTCACGCCCAATCTGCGCGGCATGACCCGTCTGTCGATCGGCATCGGCCCGGGCTTCTCGCCATCGGCCAATTGCGACA
TCGCGATCGAGACCCGGCCGGACCGGCTCGGGCAGATCGTGCGCGAGGGCTGGACCCTCGCGAAGGACGATATTGGCGAA
CTCGGCGGCGTCGGAGCAGACAGGTTGGTAAATTCACCGCATGAAGGCCGCTGGCATTCGCCGGTCGAGATCGGCACCCG
GATCTACAAGGGGTTCGTGGTCGGTCACCTTTCCGGCGTCGCGATCACCGCGCCCTATGACGGCATCCTGCGCGGCATCG
TCCGCGACGGCAGCGACGTGCCCGCGGGCATCGCGCTCGCCGAGATCGACCCGCGCGGCCGTCATGCCCAGTGGACCGGG
ATCGACGCGAAGGGGCAGGCGCTCGCACAGGCAACGCTCGCGGCCATCCGGCTGCACGCGGCCGATCGCATCGGCGCGAG
CGCGGCCGCCTCCCGCTGA

Upstream 100 bases:

>100_bases
ACTCATTGATCATTCGAACTGGAAGCTGGCTTTCCAGTCTCACGACGGACAGCCACGAGACATCGAACGCCGTATGGACC
GGGACATGGGGACGAATGCA

Downstream 100 bases:

>100_bases
TTGCAGCGCTTTCGAACGATTCTCGCTAATGCGAGTCTCGATCGCCCATCTCGGCATCGGGCTTGGCATCGCCGTTGCTT
ATTGTTGGCAGGAGCGAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MRFAVVLGTNDVASAIAVHLHREGFCVVLSHDPNPPVMRRKMAFHDALFGDAVRIENVIGERIDSTMDVFKALGDPQHVL
VTPLGLLDLLPVRAIDVLIDARMQTREVTPNLRGMTRLSIGIGPGFSPSANCDIAIETRPDRLGQIVREGWTLAKDDIGE
LGGVGADRLVNSPHEGRWHSPVEIGTRIYKGFVVGHLSGVAITAPYDGILRGIVRDGSDVPAGIALAEIDPRGRHAQWTG
IDAKGQALAQATLAAIRLHAADRIGASAAASR

Sequences:

>Translated_272_residues
MRFAVVLGTNDVASAIAVHLHREGFCVVLSHDPNPPVMRRKMAFHDALFGDAVRIENVIGERIDSTMDVFKALGDPQHVL
VTPLGLLDLLPVRAIDVLIDARMQTREVTPNLRGMTRLSIGIGPGFSPSANCDIAIETRPDRLGQIVREGWTLAKDDIGE
LGGVGADRLVNSPHEGRWHSPVEIGTRIYKGFVVGHLSGVAITAPYDGILRGIVRDGSDVPAGIALAEIDPRGRHAQWTG
IDAKGQALAQATLAAIRLHAADRIGASAAASR
>Mature_272_residues
MRFAVVLGTNDVASAIAVHLHREGFCVVLSHDPNPPVMRRKMAFHDALFGDAVRIENVIGERIDSTMDVFKALGDPQHVL
VTPLGLLDLLPVRAIDVLIDARMQTREVTPNLRGMTRLSIGIGPGFSPSANCDIAIETRPDRLGQIVREGWTLAKDDIGE
LGGVGADRLVNSPHEGRWHSPVEIGTRIYKGFVVGHLSGVAITAPYDGILRGIVRDGSDVPAGIALAEIDPRGRHAQWTG
IDAKGQALAQATLAAIRLHAADRIGASAAASR

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=264, Percent_Identity=30.3030303030303, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 29078; Mature: 29078

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFAVVLGTNDVASAIAVHLHREGFCVVLSHDPNPPVMRRKMAFHDALFGDAVRIENVIG
CEEEEEECCCHHHHHHHHEEECCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
ERIDSTMDVFKALGDPQHVLVTPLGLLDLLPVRAIDVLIDARMQTREVTPNLRGMTRLSI
HHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEE
GIGPGFSPSANCDIAIETRPDRLGQIVREGWTLAKDDIGELGGVGADRLVNSPHEGRWHS
ECCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCHHHHHHHCCCCHHHHCCCCCCCCCCC
PVEIGTRIYKGFVVGHLSGVAITAPYDGILRGIVRDGSDVPAGIALAEIDPRGRHAQWTG
HHHHHHHHHHHHHEEECCCEEEECCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEECC
IDAKGQALAQATLAAIRLHAADRIGASAAASR
CCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCC
>Mature Secondary Structure
MRFAVVLGTNDVASAIAVHLHREGFCVVLSHDPNPPVMRRKMAFHDALFGDAVRIENVIG
CEEEEEECCCHHHHHHHHEEECCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
ERIDSTMDVFKALGDPQHVLVTPLGLLDLLPVRAIDVLIDARMQTREVTPNLRGMTRLSI
HHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEE
GIGPGFSPSANCDIAIETRPDRLGQIVREGWTLAKDDIGELGGVGADRLVNSPHEGRWHS
ECCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCHHHHHHHCCCCHHHHCCCCCCCCCCC
PVEIGTRIYKGFVVGHLSGVAITAPYDGILRGIVRDGSDVPAGIALAEIDPRGRHAQWTG
HHHHHHHHHHHHHEEECCCEEEECCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEECC
IDAKGQALAQATLAAIRLHAADRIGASAAASR
CCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]