| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is sseA [H]
Identifier: 146342275
GI number: 146342275
Start: 5617806
End: 5618657
Strand: Direct
Name: sseA [H]
Synonym: BRADO5429
Alternate gene names: 146342275
Gene position: 5617806-5618657 (Clockwise)
Preceding gene: 146342274
Following gene: 146342276
Centisome position: 75.34
GC content: 67.84
Gene sequence:
>852_bases ATGAGCAGAGATCCTTCCGACGCCCTCGTCAGCTCCGAATGGCTGGCGCAGCATTTGTCTGATCCGGATATCAAGATCCT CGACTGCACCTGGCATCATCCGAGCACCAATCTCGACGGCCGCACACAGTATCGCGGCCGGCACCTGCCGGGCTCGGTGC ATTTCGACATCGACCAGGTCGCCGACAAGACCAACCCGCTGCCGCATATGCTGCCGACGGCGGAGGACTTCGCCCACAAG GTCGGGCTGCTCGGCATCAGCAATGCCGACCGGGTCATCGTCTATGACCGCCACTATGGCGGCTCCGCCGCGGGCCGCGT GTGGTGGATGTTCCGCGTCTTCGGCCACGATAACGTTGCCCTGCTCGATGGTGGCTTCGGCAAATGGACCAAGGAGAAGC AGCCGGCGGAGATGACGCCGGTGCGCCCGTCGCCGGCCAGCTTCACGGCCAGCTTCCGGCCCGAGCTGGTCGCGACCTCT GCGCAGGTGCAGGGCGCGCTGCAAAGTGGCGGGCAGCTGGTCGACGCCCGCGGTCCGGGCAAGTTCGACGGCACGCAGCC GGACGTTTTTTCCTTCAAGCGCCAGGGCCACATTCCCGGCGCCATCAACCTGCCCTGGGCCGATCTGGTCGATCCCGACA CCGGCGTGCTGCTGCCGCCCGACGGACTTGCCGCGCGCTTCGCGGCCGCCGGTGTCGATCTGGCGAAGCCGATCGTCACC ACCTGCGCCTCGGGCATCATCTCCTGCATGCTGGCGCTGGCGCTGTACCGGCTCGGCGTTCCCACCGTCGCGGTCCACGA CGGCGCCTGGGCGGAATGGAGCCAGCTCGACGACACGCCGGCGGCGGCGTGA
Upstream 100 bases:
>100_bases TATTACGACAGCCATCCGCGCCCGGGCTACGCGATGCCGAAAACGCTCTGACGCGCTTTTCGCGTCAGCTGTCCCGTTGG CCCTCATCGAGAGCGCATGC
Downstream 100 bases:
>100_bases CCTCTGGACCTCGATGACGGGAGCCCACGCATGACAAAGACTCTGGTCAAGACCACGCAGGACGGCCGCAAGGTGGAAGT GATCGGGCTGGCCATCTGCC
Product: thiosulfate sulfurtransferase
Products: NA
Alternate protein names: MST; Rhodanese-like protein [H]
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MSRDPSDALVSSEWLAQHLSDPDIKILDCTWHHPSTNLDGRTQYRGRHLPGSVHFDIDQVADKTNPLPHMLPTAEDFAHK VGLLGISNADRVIVYDRHYGGSAAGRVWWMFRVFGHDNVALLDGGFGKWTKEKQPAEMTPVRPSPASFTASFRPELVATS AQVQGALQSGGQLVDARGPGKFDGTQPDVFSFKRQGHIPGAINLPWADLVDPDTGVLLPPDGLAARFAAAGVDLAKPIVT TCASGIISCMLALALYRLGVPTVAVHDGAWAEWSQLDDTPAAA
Sequences:
>Translated_283_residues MSRDPSDALVSSEWLAQHLSDPDIKILDCTWHHPSTNLDGRTQYRGRHLPGSVHFDIDQVADKTNPLPHMLPTAEDFAHK VGLLGISNADRVIVYDRHYGGSAAGRVWWMFRVFGHDNVALLDGGFGKWTKEKQPAEMTPVRPSPASFTASFRPELVATS AQVQGALQSGGQLVDARGPGKFDGTQPDVFSFKRQGHIPGAINLPWADLVDPDTGVLLPPDGLAARFAAAGVDLAKPIVT TCASGIISCMLALALYRLGVPTVAVHDGAWAEWSQLDDTPAAA >Mature_282_residues SRDPSDALVSSEWLAQHLSDPDIKILDCTWHHPSTNLDGRTQYRGRHLPGSVHFDIDQVADKTNPLPHMLPTAEDFAHKV GLLGISNADRVIVYDRHYGGSAAGRVWWMFRVFGHDNVALLDGGFGKWTKEKQPAEMTPVRPSPASFTASFRPELVATSA QVQGALQSGGQLVDARGPGKFDGTQPDVFSFKRQGHIPGAINLPWADLVDPDTGVLLPPDGLAARFAAAGVDLAKPIVTT CASGIISCMLALALYRLGVPTVAVHDGAWAEWSQLDDTPAAA
Specific function: Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. Its participation in detoxification of cyanide may be small. May be involved in the enhancement of serine sensitivity [H]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI17402865, Length=273, Percent_Identity=44.6886446886447, Blast_Score=231, Evalue=7e-61, Organism=Homo sapiens, GI194473668, Length=272, Percent_Identity=41.1764705882353, Blast_Score=226, Evalue=2e-59, Organism=Homo sapiens, GI61835204, Length=272, Percent_Identity=41.1764705882353, Blast_Score=225, Evalue=4e-59, Organism=Homo sapiens, GI194473681, Length=272, Percent_Identity=41.1764705882353, Blast_Score=225, Evalue=4e-59, Organism=Escherichia coli, GI87082121, Length=274, Percent_Identity=38.6861313868613, Blast_Score=193, Evalue=1e-50, Organism=Escherichia coli, GI87081967, Length=273, Percent_Identity=27.1062271062271, Blast_Score=70, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17561888, Length=294, Percent_Identity=25.5102040816327, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71997283, Length=304, Percent_Identity=26.6447368421053, Blast_Score=100, Evalue=9e-22, Organism=Caenorhabditis elegans, GI17559150, Length=240, Percent_Identity=27.0833333333333, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI115534702, Length=197, Percent_Identity=30.9644670050761, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17543836, Length=277, Percent_Identity=25.2707581227437, Blast_Score=78, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17543838, Length=277, Percent_Identity=25.2707581227437, Blast_Score=78, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6324825, Length=268, Percent_Identity=33.955223880597, Blast_Score=143, Evalue=3e-35,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR001307 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.2 [H]
Molecular weight: Translated: 30431; Mature: 30299
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRDPSDALVSSEWLAQHLSDPDIKILDCTWHHPSTNLDGRTQYRGRHLPGSVHFDIDQV CCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECHHHH ADKTNPLPHMLPTAEDFAHKVGLLGISNADRVIVYDRHYGGSAAGRVWWMFRVFGHDNVA HHCCCCCCCCCCCHHHHHHHHCEEEECCCCEEEEEECCCCCCCCCCEEEEEEEECCCCEE LLDGGFGKWTKEKQPAEMTPVRPSPASFTASFRPELVATSAQVQGALQSGGQLVDARGPG EEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCC KFDGTQPDVFSFKRQGHIPGAINLPWADLVDPDTGVLLPPDGLAARFAAAGVDLAKPIVT CCCCCCCHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEECCCCHHHHHHHCCCHHHHHHHH TCASGIISCMLALALYRLGVPTVAVHDGAWAEWSQLDDTPAAA HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCCCCC >Mature Secondary Structure SRDPSDALVSSEWLAQHLSDPDIKILDCTWHHPSTNLDGRTQYRGRHLPGSVHFDIDQV CCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEECHHHH ADKTNPLPHMLPTAEDFAHKVGLLGISNADRVIVYDRHYGGSAAGRVWWMFRVFGHDNVA HHCCCCCCCCCCCHHHHHHHHCEEEECCCCEEEEEECCCCCCCCCCEEEEEEEECCCCEE LLDGGFGKWTKEKQPAEMTPVRPSPASFTASFRPELVATSAQVQGALQSGGQLVDARGPG EEECCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCC KFDGTQPDVFSFKRQGHIPGAINLPWADLVDPDTGVLLPPDGLAARFAAAGVDLAKPIVT CCCCCCCHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEECCCCHHHHHHHCCCHHHHHHHH TCASGIISCMLALALYRLGVPTVAVHDGAWAEWSQLDDTPAAA HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]