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The map label for this gene is spsC [H]

Identifier: 146342257

GI number: 146342257

Start: 5606401

End: 5607612

Strand: Reverse

Name: spsC [H]

Synonym: BRADO5411

Alternate gene names: 146342257

Gene position: 5607612-5606401 (Counterclockwise)

Preceding gene: 146342258

Following gene: 146342256

Centisome position: 75.2

GC content: 65.1

Gene sequence:

>1212_bases
ATGAAGCCCTATCTGGTGCATGACGCCGACCGGCAGGAGCAGGACGAAGCCGAGCTGACGCCGGTCGAAGCCAGCTTCAT
TCCGCTGTCCGATCCGGACATCACGACGGCGGAGATCGCAGCCGTGGACGCCGCGTTGCGCTCGCCGCGGCTCTCCCACG
GGCCGCTGGTCGAGGAATTCGAGGCCGCCTTCGCCGCCTATCTTGGGCGTAAATACGCCATTGCCGTTCCGAGCGGGACT
CTTGGCCTTGTCCTGGTTCTGCGGGGCTTGGGAATCGGCCCTGGTGACGAGGTGATCGCGTCGTCCTATTCGTTCCGCGA
GGTCGCGCATGCGATCAGCATTGTCGGCGCCAAGCCTGTGTTCGCCGATATCGACTATTATTCCGGTACGCTCGCGCCAA
GCAAGATCGAGGCGCGCATCACGCCACAGACCAAGGCGATCCTGGCCGGCAACACCAATGGCCATCCGGCCAAGTGGTCG
GAGCTGCAGGCGATCGCCAAGGCACACAGCCTGACGCTGCTCGAGGATTCCACCGAGGCGATCGGCTCGAAATACAAGGG
CGCGCTGGTCGGCACCTTCGGCGCGGCCGCGGTGTTCGACTTCTCGCAGCCATTCGCGCTGACCTGCGGCGAAGGCGGCA
TGGTCGTCACCGACGACGTCGACATTGCCGTGGCCGTGCGCCGCCACCGCTCGCACCGGCTCGACGAGCGGAGCTCGGTC
GTGGTCAGCGGCACGCCGTCGCATCAGGCGGTCATGAGCGACGTCACCGCGGCGCTGGGGTTGGCGCAGCTCAAGCGCAT
CGACGAGATCCTGGAGCGCCGCCGGCTGATCGAGCAGATCTATTACAGCCAGGTGCAATCGTTCGAGGGCATCAAGGACC
CCTATGTCGGGCCAGATGTCACCGAGGTGAACTGGTTCCTCTACCAGGTGCATCTCGGGACGCGGTTCTCGAAGTCGAGC
CGCGACTCGATCGTCGAGGACCTCCGCGTCGAGCAGGTCGAGGCTGTCGCCTATTCCAATCCGCTGCATCTGCAGCGGCA
CTATTTCGACATGGGCTACCGCCGCGGCGACTGTCTCGTGACCGAGAAGGTCGCCGATCGCGTCGTGGCCCTGCCGTTCC
ACGTCCATCTGACCACCGACCAGATCGCCTTCATCGTCGCGACGATGAAGGACGCCTCGGTCAACGTCGGAGCGGGCGCG
GCGATCTACTGA

Upstream 100 bases:

>100_bases
CGTTCGACCTGCATCTGCTCGACGCGAGCGAGCACTGCGCGGGTGTGACCGACGATCCCTCGAAGGCCACCGGCCTGATC
CTGGCCAAGCGGAGCTGATC

Downstream 100 bases:

>100_bases
AATAGAGCGAATCCAACCAGCAAAGGAGACTCCACATGGCAACTCTGACGGTCATGCCCTCTGGAAAGACGATCGAGGTG
GGTGAGGGCACCACCATTCT

Product: DegT/DnrJ/EryC1/StrS family aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MKPYLVHDADRQEQDEAELTPVEASFIPLSDPDITTAEIAAVDAALRSPRLSHGPLVEEFEAAFAAYLGRKYAIAVPSGT
LGLVLVLRGLGIGPGDEVIASSYSFREVAHAISIVGAKPVFADIDYYSGTLAPSKIEARITPQTKAILAGNTNGHPAKWS
ELQAIAKAHSLTLLEDSTEAIGSKYKGALVGTFGAAAVFDFSQPFALTCGEGGMVVTDDVDIAVAVRRHRSHRLDERSSV
VVSGTPSHQAVMSDVTAALGLAQLKRIDEILERRRLIEQIYYSQVQSFEGIKDPYVGPDVTEVNWFLYQVHLGTRFSKSS
RDSIVEDLRVEQVEAVAYSNPLHLQRHYFDMGYRRGDCLVTEKVADRVVALPFHVHLTTDQIAFIVATMKDASVNVGAGA
AIY

Sequences:

>Translated_403_residues
MKPYLVHDADRQEQDEAELTPVEASFIPLSDPDITTAEIAAVDAALRSPRLSHGPLVEEFEAAFAAYLGRKYAIAVPSGT
LGLVLVLRGLGIGPGDEVIASSYSFREVAHAISIVGAKPVFADIDYYSGTLAPSKIEARITPQTKAILAGNTNGHPAKWS
ELQAIAKAHSLTLLEDSTEAIGSKYKGALVGTFGAAAVFDFSQPFALTCGEGGMVVTDDVDIAVAVRRHRSHRLDERSSV
VVSGTPSHQAVMSDVTAALGLAQLKRIDEILERRRLIEQIYYSQVQSFEGIKDPYVGPDVTEVNWFLYQVHLGTRFSKSS
RDSIVEDLRVEQVEAVAYSNPLHLQRHYFDMGYRRGDCLVTEKVADRVVALPFHVHLTTDQIAFIVATMKDASVNVGAGA
AIY
>Mature_403_residues
MKPYLVHDADRQEQDEAELTPVEASFIPLSDPDITTAEIAAVDAALRSPRLSHGPLVEEFEAAFAAYLGRKYAIAVPSGT
LGLVLVLRGLGIGPGDEVIASSYSFREVAHAISIVGAKPVFADIDYYSGTLAPSKIEARITPQTKAILAGNTNGHPAKWS
ELQAIAKAHSLTLLEDSTEAIGSKYKGALVGTFGAAAVFDFSQPFALTCGEGGMVVTDDVDIAVAVRRHRSHRLDERSSV
VVSGTPSHQAVMSDVTAALGLAQLKRIDEILERRRLIEQIYYSQVQSFEGIKDPYVGPDVTEVNWFLYQVHLGTRFSKSS
RDSIVEDLRVEQVEAVAYSNPLHLQRHYFDMGYRRGDCLVTEKVADRVVALPFHVHLTTDQIAFIVATMKDASVNVGAGA
AIY

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=378, Percent_Identity=30.6878306878307, Blast_Score=174, Evalue=1e-44,
Organism=Escherichia coli, GI2367285, Length=375, Percent_Identity=27.7333333333333, Blast_Score=118, Evalue=6e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 43755; Mature: 43755

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPYLVHDADRQEQDEAELTPVEASFIPLSDPDITTAEIAAVDAALRSPRLSHGPLVEEF
CCCCEECCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHH
EAAFAAYLGRKYAIAVPSGTLGLVLVLRGLGIGPGDEVIASSYSFREVAHAISIVGAKPV
HHHHHHHHCCEEEEEECCCHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCE
FADIDYYSGTLAPSKIEARITPQTKAILAGNTNGHPAKWSELQAIAKAHSLTLLEDSTEA
EEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHEEEECCCHHH
IGSKYKGALVGTFGAAAVFDFSQPFALTCGEGGMVVTDDVDIAVAVRRHRSHRLDERSSV
HCCCCCCEEEECCCHHEEEECCCCEEEEECCCCEEEECCCCHHHHHHHHHHHCCCCCCCE
VVSGTPSHQAVMSDVTAALGLAQLKRIDEILERRRLIEQIYYSQVQSFEGIKDPYVGPDV
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TEVNWFLYQVHLGTRFSKSSRDSIVEDLRVEQVEAVAYSNPLHLQRHYFDMGYRRGDCLV
CEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEE
TEKVADRVVALPFHVHLTTDQIAFIVATMKDASVNVGAGAAIY
EHHHHCCEEEEEEEEEEECCCEEEEEEEECCCCEECCCCCCCC
>Mature Secondary Structure
MKPYLVHDADRQEQDEAELTPVEASFIPLSDPDITTAEIAAVDAALRSPRLSHGPLVEEF
CCCCEECCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHH
EAAFAAYLGRKYAIAVPSGTLGLVLVLRGLGIGPGDEVIASSYSFREVAHAISIVGAKPV
HHHHHHHHCCEEEEEECCCHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCE
FADIDYYSGTLAPSKIEARITPQTKAILAGNTNGHPAKWSELQAIAKAHSLTLLEDSTEA
EEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHEEEECCCHHH
IGSKYKGALVGTFGAAAVFDFSQPFALTCGEGGMVVTDDVDIAVAVRRHRSHRLDERSSV
HCCCCCCEEEECCCHHEEEECCCCEEEEECCCCEEEECCCCHHHHHHHHHHHCCCCCCCE
VVSGTPSHQAVMSDVTAALGLAQLKRIDEILERRRLIEQIYYSQVQSFEGIKDPYVGPDV
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TEVNWFLYQVHLGTRFSKSSRDSIVEDLRVEQVEAVAYSNPLHLQRHYFDMGYRRGDCLV
CEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEE
TEKVADRVVALPFHVHLTTDQIAFIVATMKDASVNVGAGAAIY
EHHHHCCEEEEEEEEEEECCCEEEEEEEECCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]