| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yitW [H]
Identifier: 146342248
GI number: 146342248
Start: 5601376
End: 5601738
Strand: Direct
Name: yitW [H]
Synonym: BRADO5402
Alternate gene names: 146342248
Gene position: 5601376-5601738 (Clockwise)
Preceding gene: 146342247
Following gene: 146342249
Centisome position: 75.12
GC content: 67.22
Gene sequence:
>363_bases ATGAGCATGCACGCCGCTGCCCCTCCCTCCCCGTCGCCGAACGCGCTGGCGACCGGCTCCCAGGATGCCGCCGAGAGCGT GATCGCCGCACTGCGGACGGTGTACGACCCGGAAATTCCGGTGAACGTCTACGACCTCGGCCTGGTCTATCGCATCGCGC ATGAAGGCGGCGGCGCGGTTGAGATCGACATGACGCTCACAGCTCCGGGATGCCCGGTCGCGAGCGAGATCGTCCGCATG GTGGAGGACGCCGTGCAGGCCGTCGACGGCGTCGTCTCGGTCAAGGTCACCCTGGTGTTCGAGCCGCCGTGGGACAAGTC GCGGATGTCGGAAGAGACCGCCCTGGAGCTGGGCTTGTTGTAA
Upstream 100 bases:
>100_bases GAGTGAGGCTTGCCATGCAGCATCTTCAGCGCAATCTCGACACGACTTCGAACGACCATCCCCCGGTGCGAACCAGGACC ATGAGAGGACCCAACGCATG
Downstream 100 bases:
>100_bases CGCACGCAAACCGCGCCAACGACGCAGGAGCATCACATGGCTACCGAGAGCACCATCAAGCTCACCGCCAATGACGGGCA TACGTTCCAGGCGTTCCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MSMHAAAPPSPSPNALATGSQDAAESVIAALRTVYDPEIPVNVYDLGLVYRIAHEGGGAVEIDMTLTAPGCPVASEIVRM VEDAVQAVDGVVSVKVTLVFEPPWDKSRMSEETALELGLL
Sequences:
>Translated_120_residues MSMHAAAPPSPSPNALATGSQDAAESVIAALRTVYDPEIPVNVYDLGLVYRIAHEGGGAVEIDMTLTAPGCPVASEIVRM VEDAVQAVDGVVSVKVTLVFEPPWDKSRMSEETALELGLL >Mature_119_residues SMHAAAPPSPSPNALATGSQDAAESVIAALRTVYDPEIPVNVYDLGLVYRIAHEGGGAVEIDMTLTAPGCPVASEIVRMV EDAVQAVDGVVSVKVTLVFEPPWDKSRMSEETALELGLL
Specific function: May Be Part Of A Multicomponent Oxygenase Involved In Phenylacetyl-CoA Hydroxylation. [C]
COG id: COG2151
COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MIP18 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002744 [H]
Pfam domain/function: PF01883 DUF59 [H]
EC number: NA
Molecular weight: Translated: 12575; Mature: 12444
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMHAAAPPSPSPNALATGSQDAAESVIAALRTVYDPEIPVNVYDLGLVYRIAHEGGGAV CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHEEEEEECCCCCEE EIDMTLTAPGCPVASEIVRMVEDAVQAVDGVVSVKVTLVFEPPWDKSRMSEETALELGLL EEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCHHHCCHHHHHHCCCC >Mature Secondary Structure SMHAAAPPSPSPNALATGSQDAAESVIAALRTVYDPEIPVNVYDLGLVYRIAHEGGGAV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHEEEEEECCCCCEE EIDMTLTAPGCPVASEIVRMVEDAVQAVDGVVSVKVTLVFEPPWDKSRMSEETALELGLL EEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCHHHCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353931; 9025291; 9384377 [H]