Click here to switch to the map view.

The map label for this gene is fixX [H]

Identifier: 146342231

GI number: 146342231

Start: 5589532

End: 5589828

Strand: Reverse

Name: fixX [H]

Synonym: BRADO5383

Alternate gene names: 146342231

Gene position: 5589828-5589532 (Counterclockwise)

Preceding gene: 146342232

Following gene: 146342230

Centisome position: 74.96

GC content: 63.97

Gene sequence:

>297_bases
ATGAGCACGGACGTTGCAGTCAGGGTCGAAGACAAACTGTTCTACAATCGCTACCAGGTCGATCCCGGCCGGGCCCATAT
CAAGGTCCGTCCGCACACCACGCCGAGCCCGCAGCTGAAGGCGCTGCTCAAGGCGTGTCCCGCGCGCTGCTACGAGCTCA
ACGACTCCGGCCAGGTCGAGATCACCGTCGACGGCTGCATCGAATGCGGCACCTGCCGGGTGATCGGCGAAGGCAGCGGC
GACATCGAATGGAGCTATCCTCGCGGCGGCTACGGCGTGCTGTTCAAGTTCGGCTGA

Upstream 100 bases:

>100_bases
CGAGGTCGTGGACGGGCCTGTTCGGCGATGCCTTCAAGTTCGCCCGGGCGTGGCGCTAATCGGTGAATGAACTAAGCAAT
CGAAGCGAGGGAGATCAGAG

Downstream 100 bases:

>100_bases
GCGCCGAGGCAGGCAGGGCGGCGCATGTCCCGCGAAATGCGCCGCGGACCATCCGATGCTATATCATTCTTGATATAGGT
CATTGAACACGGGTGTTCTC

Product: putative ferredoxin protein, FixX

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MSTDVAVRVEDKLFYNRYQVDPGRAHIKVRPHTTPSPQLKALLKACPARCYELNDSGQVEITVDGCIECGTCRVIGEGSG
DIEWSYPRGGYGVLFKFG

Sequences:

>Translated_98_residues
MSTDVAVRVEDKLFYNRYQVDPGRAHIKVRPHTTPSPQLKALLKACPARCYELNDSGQVEITVDGCIECGTCRVIGEGSG
DIEWSYPRGGYGVLFKFG
>Mature_97_residues
STDVAVRVEDKLFYNRYQVDPGRAHIKVRPHTTPSPQLKALLKACPARCYELNDSGQVEITVDGCIECGTCRVIGEGSGD
IEWSYPRGGYGVLFKFG

Specific function: Could be a 3Fe-4S cluster-containing protein [H]

COG id: COG2440

COG function: function code C; Ferredoxin-like protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To ferredoxins from P.putida and C.tartarivorum, ferredoxin I from A.vinelandii, ferredoxin II from D.desulfuricans [H]

Homologues:

Organism=Escherichia coli, GI1786228, Length=92, Percent_Identity=44.5652173913043, Blast_Score=84, Evalue=2e-18,
Organism=Escherichia coli, GI1787992, Length=98, Percent_Identity=37.7551020408163, Blast_Score=79, Evalue=4e-17,
Organism=Escherichia coli, GI87082156, Length=73, Percent_Identity=35.6164383561644, Blast_Score=60, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR012206 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10838; Mature: 10707

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTDVAVRVEDKLFYNRYQVDPGRAHIKVRPHTTPSPQLKALLKACPARCYELNDSGQVE
CCCCEEEEEECCEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCEEE
ITVDGCIECGTCRVIGEGSGDIEWSYPRGGYGVLFKFG
EEECCCEECCEEEEEECCCCCEEECCCCCCEEEEEEEC
>Mature Secondary Structure 
STDVAVRVEDKLFYNRYQVDPGRAHIKVRPHTTPSPQLKALLKACPARCYELNDSGQVE
CCCEEEEEECCEEEEEEEECCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCEEE
ITVDGCIECGTCRVIGEGSGDIEWSYPRGGYGVLFKFG
EEECCCEECCEEEEEECCCCCEEECCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1850088 [H]