| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is cobO [H]
Identifier: 146341793
GI number: 146341793
Start: 5112374
End: 5112982
Strand: Direct
Name: cobO [H]
Synonym: BRADO4912
Alternate gene names: 146341793
Gene position: 5112374-5112982 (Clockwise)
Preceding gene: 146341792
Following gene: 146341794
Centisome position: 68.56
GC content: 66.01
Gene sequence:
>609_bases ATGACAGAGAACGACGACGACGCGCGTCACAAGGCCAAGATGGAGAATCGCAAGGCGGTTCAGGATGCCGAGGTCGCCTC GAAGACGGTCGAAAAAGGTCTGCTGGTCGTCCACACCGGCAAGGGCAAGGGCAAGTCCACGGCCGGCTGGGGCCTGATGC TGCGCGCGCTCGGGCGCGGCTTTCACATCGGCGTGGTGCAGTTCGGTAAGGGCGCGTGGGAGACTGGCGAGCGCAAGGCG ATCGCGGCCTTCGGCGATCAGGTGTCCTGGCACACCCTGGGCGAAGGCTTCACCTGGGAGACGCAGGATCGCGCGCGCGA CGTCGCCGCAGCCGAGCGCGCCTGGGCCAAGGCAAAAGAGCTGATGGCCGATCCTGCGATCCGGCTCGTGATCCTCGACG AGCTGAACATCGCGCTGCGCTACGATCATCTGCCGATCGCGGACGTCGTCGCCACGCTCGCCGCGCGCCGCCCCGATCTG CACGTCGTCGTCACCGGCCGCAATGCCAAGCCCGAGCTGATCGAGGCCGCCGATCTCGTCACTGAGATGACCCTGATCAA GCATCACTTCGCAGCTGGCGTGAAGGCGCAGGAAGGCATCGAGTTCTAG
Upstream 100 bases:
>100_bases GCCCAGGGCCGATTGAACCAGGACGTCGCAGCCGTTGCGGATCGCGTGATCCTGATGACGGCCGGGCTGCCGCTCATCTT GAAGTGAAGAGGACGAACCG
Downstream 100 bases:
>100_bases TCCATGGCTGCGCGCGCGATCATGTTCCAGGGCACCGGTTCCGACGTCGGCAAATCGCTGATGGTCGCCGGACTCGCGCG CGCGCTGACTCTGCGCGGGC
Product: Cob(I)yrinic acid a,c-diamide adenosyltransferase
Products: NA
Alternate protein names: Cob(I)alamin adenosyltransferase; Corrinoid adenosyltransferase [H]
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MTENDDDARHKAKMENRKAVQDAEVASKTVEKGLLVVHTGKGKGKSTAGWGLMLRALGRGFHIGVVQFGKGAWETGERKA IAAFGDQVSWHTLGEGFTWETQDRARDVAAAERAWAKAKELMADPAIRLVILDELNIALRYDHLPIADVVATLAARRPDL HVVVTGRNAKPELIEAADLVTEMTLIKHHFAAGVKAQEGIEF
Sequences:
>Translated_202_residues MTENDDDARHKAKMENRKAVQDAEVASKTVEKGLLVVHTGKGKGKSTAGWGLMLRALGRGFHIGVVQFGKGAWETGERKA IAAFGDQVSWHTLGEGFTWETQDRARDVAAAERAWAKAKELMADPAIRLVILDELNIALRYDHLPIADVVATLAARRPDL HVVVTGRNAKPELIEAADLVTEMTLIKHHFAAGVKAQEGIEF >Mature_201_residues TENDDDARHKAKMENRKAVQDAEVASKTVEKGLLVVHTGKGKGKSTAGWGLMLRALGRGFHIGVVQFGKGAWETGERKAI AAFGDQVSWHTLGEGFTWETQDRARDVAAAERAWAKAKELMADPAIRLVILDELNIALRYDHLPIADVVATLAARRPDLH VVVTGRNAKPELIEAADLVTEMTLIKHHFAAGVKAQEGIEF
Specific function: Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids [H]
COG id: COG2109
COG function: function code H; ATP:corrinoid adenosyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Cob(I)alamin adenosyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1787525, Length=196, Percent_Identity=42.8571428571429, Blast_Score=169, Evalue=2e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003724 [H]
Pfam domain/function: PF02572 CobA_CobO_BtuR [H]
EC number: =2.5.1.17 [H]
Molecular weight: Translated: 22081; Mature: 21950
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTENDDDARHKAKMENRKAVQDAEVASKTVEKGLLVVHTGKGKGKSTAGWGLMLRALGRG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHCCC FHIGVVQFGKGAWETGERKAIAAFGDQVSWHTLGEGFTWETQDRARDVAAAERAWAKAKE EEEEEEEECCCCCCCCCCEEEEHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH LMADPAIRLVILDELNIALRYDHLPIADVVATLAARRPDLHVVVTGRNAKPELIEAADLV HHCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHH TEMTLIKHHFAAGVKAQEGIEF HHHHHHHHHHHCCCCHHCCCCC >Mature Secondary Structure TENDDDARHKAKMENRKAVQDAEVASKTVEKGLLVVHTGKGKGKSTAGWGLMLRALGRG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHCCC FHIGVVQFGKGAWETGERKAIAAFGDQVSWHTLGEGFTWETQDRARDVAAAERAWAKAKE EEEEEEEECCCCCCCCCCEEEEHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHH LMADPAIRLVILDELNIALRYDHLPIADVVATLAARRPDLHVVVTGRNAKPELIEAADLV HHCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHH TEMTLIKHHFAAGVKAQEGIEF HHHHHHHHHHHCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1655697; 1917862 [H]