Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146341747

Identifier: 146341747

GI number: 146341747

Start: 5066014

End: 5066433

Strand: Direct

Name: 146341747

Synonym: BRADO4863

Alternate gene names: NA

Gene position: 5066014-5066433 (Clockwise)

Preceding gene: 146341734

Following gene: 146341750

Centisome position: 67.94

GC content: 66.43

Gene sequence:

>420_bases
ATGAAGCACAAGCAATTCGCCGCCCTGCCCTTTCGCATCGAGGCCGCGGAGCTCAGCATCCTCTTGATCACCACGCGCCG
GAAGCGGCGCTGGTCGGTGCCGAAGGGATCTCCGATGTTGCGCAAGCGCGCGCACCGGGTGGCGGCGATCGAGGCTTACG
AAGAAGCCGGGCTGCGCGGCAAGATCAGCCGCCAGGCGCTCGGCCGCTTCAAGCACCGGAAGCGCAAGGGCAAGCGCAAG
ATTCCCTGCGAGGTGAAGCTCTATCCGTTGAAGGTAACCAAGCAGCACGGCCGCTTTCCCGAGCGTGGCCAGCGCAAGCT
GGTCTGGGTATCCGCCTCCGAAGCCGCGCGCCGCGTCCATCACCCTGAGCTGCGCCGGCTGATCCAGGGCTTCTCCCGGC
AGCAGCGCAAGCGAAGCTGA

Upstream 100 bases:

>100_bases
TCGTATCAATTGATATCGCACAGTTGACTTCGTGCGGGTCGTCGCGCAGAGGAACCAACCGTTCCGCGCCCGGTTCTCAC
CGCAGTAAAAGGGGGGTCCC

Downstream 100 bases:

>100_bases
CCGCCGCTCAGCGCTCCGCGAATTTGATGGTCGACACCGGCCAGCGGCCTTCGTGTCCGTTGATCGAAATCCGCAGTCCA
TGCAGCTCGTCGAGATAGAC

Product: putative hydrolase

Products: NA

Alternate protein names: Nudix Domain Protein; Nudix Hydrolase; NTP Pyrophosphohydrolase Protein MuT/Nudix Family; Hydrolase NUDIX Family; NUDIX Family Hydrolase; MutT/NUDIX Family NTP Pyrophosphohydrolase; MutT Family NTP Pyrophosphatase; NUDIX Domain-Containing Protein; NTP Pyrophosphohydrolase Protein; Bis(5-Nucleosidyl)-Tetraphosphatase; NTP Pyrophosphohydrolase MutT Family; MutT/Nudix Family Phosphohydrolase; Hydrolase Nudix Family; Orf_Bo; Hydroxylase NUDIX Family Protein; NUDIX Family Protein

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MKHKQFAALPFRIEAAELSILLITTRRKRRWSVPKGSPMLRKRAHRVAAIEAYEEAGLRGKISRQALGRFKHRKRKGKRK
IPCEVKLYPLKVTKQHGRFPERGQRKLVWVSASEAARRVHHPELRRLIQGFSRQQRKRS

Sequences:

>Translated_139_residues
MKHKQFAALPFRIEAAELSILLITTRRKRRWSVPKGSPMLRKRAHRVAAIEAYEEAGLRGKISRQALGRFKHRKRKGKRK
IPCEVKLYPLKVTKQHGRFPERGQRKLVWVSASEAARRVHHPELRRLIQGFSRQQRKRS
>Mature_139_residues
MKHKQFAALPFRIEAAELSILLITTRRKRRWSVPKGSPMLRKRAHRVAAIEAYEEAGLRGKISRQALGRFKHRKRKGKRK
IPCEVKLYPLKVTKQHGRFPERGQRKLVWVSASEAARRVHHPELRRLIQGFSRQQRKRS

Specific function: Unknown

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16404; Mature: 16404

Theoretical pI: Translated: 12.45; Mature: 12.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHKQFAALPFRIEAAELSILLITTRRKRRWSVPKGSPMLRKRAHRVAAIEAYEEAGLRG
CCCCCCCCCCEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
KISRQALGRFKHRKRKGKRKIPCEVKLYPLKVTKQHGRFPERGQRKLVWVSASEAARRVH
CHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEEHHHHHHHCC
HPELRRLIQGFSRQQRKRS
CHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKHKQFAALPFRIEAAELSILLITTRRKRRWSVPKGSPMLRKRAHRVAAIEAYEEAGLRG
CCCCCCCCCCEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
KISRQALGRFKHRKRKGKRKIPCEVKLYPLKVTKQHGRFPERGQRKLVWVSASEAARRVH
CHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEEHHHHHHHCC
HPELRRLIQGFSRQQRKRS
CHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA