| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341747
Identifier: 146341747
GI number: 146341747
Start: 5066014
End: 5066433
Strand: Direct
Name: 146341747
Synonym: BRADO4863
Alternate gene names: NA
Gene position: 5066014-5066433 (Clockwise)
Preceding gene: 146341734
Following gene: 146341750
Centisome position: 67.94
GC content: 66.43
Gene sequence:
>420_bases ATGAAGCACAAGCAATTCGCCGCCCTGCCCTTTCGCATCGAGGCCGCGGAGCTCAGCATCCTCTTGATCACCACGCGCCG GAAGCGGCGCTGGTCGGTGCCGAAGGGATCTCCGATGTTGCGCAAGCGCGCGCACCGGGTGGCGGCGATCGAGGCTTACG AAGAAGCCGGGCTGCGCGGCAAGATCAGCCGCCAGGCGCTCGGCCGCTTCAAGCACCGGAAGCGCAAGGGCAAGCGCAAG ATTCCCTGCGAGGTGAAGCTCTATCCGTTGAAGGTAACCAAGCAGCACGGCCGCTTTCCCGAGCGTGGCCAGCGCAAGCT GGTCTGGGTATCCGCCTCCGAAGCCGCGCGCCGCGTCCATCACCCTGAGCTGCGCCGGCTGATCCAGGGCTTCTCCCGGC AGCAGCGCAAGCGAAGCTGA
Upstream 100 bases:
>100_bases TCGTATCAATTGATATCGCACAGTTGACTTCGTGCGGGTCGTCGCGCAGAGGAACCAACCGTTCCGCGCCCGGTTCTCAC CGCAGTAAAAGGGGGGTCCC
Downstream 100 bases:
>100_bases CCGCCGCTCAGCGCTCCGCGAATTTGATGGTCGACACCGGCCAGCGGCCTTCGTGTCCGTTGATCGAAATCCGCAGTCCA TGCAGCTCGTCGAGATAGAC
Product: putative hydrolase
Products: NA
Alternate protein names: Nudix Domain Protein; Nudix Hydrolase; NTP Pyrophosphohydrolase Protein MuT/Nudix Family; Hydrolase NUDIX Family; NUDIX Family Hydrolase; MutT/NUDIX Family NTP Pyrophosphohydrolase; MutT Family NTP Pyrophosphatase; NUDIX Domain-Containing Protein; NTP Pyrophosphohydrolase Protein; Bis(5-Nucleosidyl)-Tetraphosphatase; NTP Pyrophosphohydrolase MutT Family; MutT/Nudix Family Phosphohydrolase; Hydrolase Nudix Family; Orf_Bo; Hydroxylase NUDIX Family Protein; NUDIX Family Protein
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MKHKQFAALPFRIEAAELSILLITTRRKRRWSVPKGSPMLRKRAHRVAAIEAYEEAGLRGKISRQALGRFKHRKRKGKRK IPCEVKLYPLKVTKQHGRFPERGQRKLVWVSASEAARRVHHPELRRLIQGFSRQQRKRS
Sequences:
>Translated_139_residues MKHKQFAALPFRIEAAELSILLITTRRKRRWSVPKGSPMLRKRAHRVAAIEAYEEAGLRGKISRQALGRFKHRKRKGKRK IPCEVKLYPLKVTKQHGRFPERGQRKLVWVSASEAARRVHHPELRRLIQGFSRQQRKRS >Mature_139_residues MKHKQFAALPFRIEAAELSILLITTRRKRRWSVPKGSPMLRKRAHRVAAIEAYEEAGLRGKISRQALGRFKHRKRKGKRK IPCEVKLYPLKVTKQHGRFPERGQRKLVWVSASEAARRVHHPELRRLIQGFSRQQRKRS
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16404; Mature: 16404
Theoretical pI: Translated: 12.45; Mature: 12.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHKQFAALPFRIEAAELSILLITTRRKRRWSVPKGSPMLRKRAHRVAAIEAYEEAGLRG CCCCCCCCCCEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC KISRQALGRFKHRKRKGKRKIPCEVKLYPLKVTKQHGRFPERGQRKLVWVSASEAARRVH CHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEEHHHHHHHCC HPELRRLIQGFSRQQRKRS CHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKHKQFAALPFRIEAAELSILLITTRRKRRWSVPKGSPMLRKRAHRVAAIEAYEEAGLRG CCCCCCCCCCEEEECCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC KISRQALGRFKHRKRKGKRKIPCEVKLYPLKVTKQHGRFPERGQRKLVWVSASEAARRVH CHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEEHHHHHHHCC HPELRRLIQGFSRQQRKRS CHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA