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The map label for this gene is xdhB [H]

Identifier: 146341672

GI number: 146341672

Start: 4969877

End: 4970698

Strand: Reverse

Name: xdhB [H]

Synonym: BRADO4777

Alternate gene names: 146341672

Gene position: 4970698-4969877 (Counterclockwise)

Preceding gene: 146341673

Following gene: 146341671

Centisome position: 66.66

GC content: 71.17

Gene sequence:

>822_bases
ATGTCGGTGACGGTGAAGACGTTCCAGGCGCTGAGCGAGGCGGCCTCCGCGCTGTCGTCGGACCGCGCCGCGCGCTATCT
CGGTGGCGGCACGCTTGTCATGCGCGATCTCAACGAAGGCGACGTCTCGATCGCGACGGTGGTCCGCGCGACGGATCGCG
CTCTGCAGAGCATCGATGCGGCTGGTGCACGGATTCGCATCGGCGCCGGCGTCACCTTTGCCCGGGTGCTGGCCGAGCGC
GAGCTCGCGTTCCTGCATCCGGCGGCGCGTTCGATCGGCGGCCCCGCGGTGCGCAACATGGGCACCGTCGGCGGCAATTT
GTTCGCGCCGGCGCCGTTCGGCGATTTCACCGTGGCGTTGCTGGCGCTCGACGGCATGGTCTCGCTGCAGGGTGGCTTCG
GCCTGCGCGACATGCCGCTCGAAGAGTTCCTGCAATCGCGCGACCGCCAGGCCGGTGCGCTGGTCGTGGCGGTGTCCTGT
CTTCGGCCGGCGTCGGGCGATGCGTTCCGCTACCGCAAGATCGCGCGCATCAAGCCGAAGGGCGGATCGGTCATCACGCT
CGCCGCGCACGTTCCGCAGAGCGGAGGCCGGGTCAGCGGCGCGCGCATCGCGCTGGGTTCGATGGCCCCGACAGCCATCC
GTGCCAAGGCAGCCGAGCGCGCGCTCGAAGGCCGTCCGCTCGACGGGAGCGCGATCAGCGCCGCGGCGAGCGCGGCAGGC
GAGGGGACGGCGCCCACGGACAACTCGCTGGCGAGCGCGTGGTATCGCCGCGAGGTCGTCGGCGTGCATCTGCGGCGCTT
GCTGTCTGGACAGGAGAGCTGA

Upstream 100 bases:

>100_bases
GAGGCGCTGACCCGCATGGTCGCGGAAGACATCTACCAGGCCGGTTTCGAGGCGATCCGATCGCATCTGAAGCAGGCCGC
ATGACAGACGAGGTGAATCG

Downstream 100 bases:

>100_bases
AGCGTGGCCAAGACTCCCTTGCAATTCCGCCACAACGGCCGCGACGTCGCGCTGTTCGTCGATGGCGGCACCAATCTCCT
GGTCGTACTGCGCGAGATGC

Product: putative oxidoreductase subunit carbon-monoxide dehydrogenase (acceptor), middle subunit CoxM/CutM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MSVTVKTFQALSEAASALSSDRAARYLGGGTLVMRDLNEGDVSIATVVRATDRALQSIDAAGARIRIGAGVTFARVLAER
ELAFLHPAARSIGGPAVRNMGTVGGNLFAPAPFGDFTVALLALDGMVSLQGGFGLRDMPLEEFLQSRDRQAGALVVAVSC
LRPASGDAFRYRKIARIKPKGGSVITLAAHVPQSGGRVSGARIALGSMAPTAIRAKAAERALEGRPLDGSAISAAASAAG
EGTAPTDNSLASAWYRREVVGVHLRRLLSGQES

Sequences:

>Translated_273_residues
MSVTVKTFQALSEAASALSSDRAARYLGGGTLVMRDLNEGDVSIATVVRATDRALQSIDAAGARIRIGAGVTFARVLAER
ELAFLHPAARSIGGPAVRNMGTVGGNLFAPAPFGDFTVALLALDGMVSLQGGFGLRDMPLEEFLQSRDRQAGALVVAVSC
LRPASGDAFRYRKIARIKPKGGSVITLAAHVPQSGGRVSGARIALGSMAPTAIRAKAAERALEGRPLDGSAISAAASAAG
EGTAPTDNSLASAWYRREVVGVHLRRLLSGQES
>Mature_272_residues
SVTVKTFQALSEAASALSSDRAARYLGGGTLVMRDLNEGDVSIATVVRATDRALQSIDAAGARIRIGAGVTFARVLAERE
LAFLHPAARSIGGPAVRNMGTVGGNLFAPAPFGDFTVALLALDGMVSLQGGFGLRDMPLEEFLQSRDRQAGALVVAVSCL
RPASGDAFRYRKIARIKPKGGSVITLAAHVPQSGGRVSGARIALGSMAPTAIRAKAAERALEGRPLDGSAISAAASAAGE
GTAPTDNSLASAWYRREVVGVHLRRLLSGQES

Specific function: Presumed to be a dehydrogenase, but possibly an oxidase. Participates in limited purine salvage (requires aspartate) but does not support aerobic growth on purines as the sole carbon source (purine catabolism) [H]

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1789231, Length=269, Percent_Identity=27.5092936802974, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 28180; Mature: 28048

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTVKTFQALSEAASALSSDRAARYLGGGTLVMRDLNEGDVSIATVVRATDRALQSIDA
CCEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHC
AGARIRIGAGVTFARVLAERELAFLHPAARSIGGPAVRNMGTVGGNLFAPAPFGDFTVAL
CCCEEEECCCHHHHHHHHHHHHHHHCHHHHHCCCHHHHHCCCCCCCEECCCCCCHHHHHH
LALDGMVSLQGGFGLRDMPLEEFLQSRDRQAGALVVAVSCLRPASGDAFRYRKIARIKPK
HHHCCCEEECCCCCCCCCCHHHHHHHCCCCCCEEEEEEEHHCCCCCCHHHHHHHEEECCC
GGSVITLAAHVPQSGGRVSGARIALGSMAPTAIRAKAAERALEGRPLDGSAISAAASAAG
CCCEEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
EGTAPTDNSLASAWYRREVVGVHLRRLLSGQES
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SVTVKTFQALSEAASALSSDRAARYLGGGTLVMRDLNEGDVSIATVVRATDRALQSIDA
CEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEHHHHHHHHHHHHHHHHC
AGARIRIGAGVTFARVLAERELAFLHPAARSIGGPAVRNMGTVGGNLFAPAPFGDFTVAL
CCCEEEECCCHHHHHHHHHHHHHHHCHHHHHCCCHHHHHCCCCCCCEECCCCCCHHHHHH
LALDGMVSLQGGFGLRDMPLEEFLQSRDRQAGALVVAVSCLRPASGDAFRYRKIARIKPK
HHHCCCEEECCCCCCCCCCHHHHHHHCCCCCCEEEEEEEHHCCCCCCHHHHHHHEEECCC
GGSVITLAAHVPQSGGRVSGARIALGSMAPTAIRAKAAERALEGRPLDGSAISAAASAAG
CCCEEEEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
EGTAPTDNSLASAWYRREVVGVHLRRLLSGQES
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]