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The map label for this gene is perR [H]

Identifier: 146341662

GI number: 146341662

Start: 4959889

End: 4960767

Strand: Direct

Name: perR [H]

Synonym: BRADO4767

Alternate gene names: 146341662

Gene position: 4959889-4960767 (Clockwise)

Preceding gene: 146341654

Following gene: 146341683

Centisome position: 66.52

GC content: 67.12

Gene sequence:

>879_bases
ATGCTGTCGAACATTCCAATCTCATCAATCAGGGCGTTTGAAGCCGCTGCGCGCACCGGATCCTTTCGCGACGCAGCAAA
TGAGCTTCACCTGACGCCCTCAGCCGTCAGTCATGCCATCCGCAAGCTGGAGGCCACGTTGCGGACCGTGCTGTTCGAGC
GCACGGCGCGCGCCGTCCACCTCACGCCGGCCGGCGAGAACCTGATGCGGCATGCGGGCGCGGCCTTCGATCAGTTGCGC
CGCGGATTGGAGGAGGTCGCGGCGCGCGGCCCGCAACTGGTGCGCGTCCATTCGGCACCGAGCTTCGCCGCGCAATGGCT
GACGCCGAGGCTGGCGCAGTTTCTCGCCGCGCATCCGAAGCTGGAGGTGCGGCTGTCGGCCAATACCGACTACGCGCGGT
TCAAGAACGACGATTTCGACATCGACATCGTCTACGGCCAGCCGCACGCCGAAGGCGTCGAGATCATCCCGCTCGCCGAG
GAGACGATCACGCCACTATGCTCGCCGGCCTTGGCCGCGACGATCAAGCGGCCGGCGGATCTGCTGGAGCGCACGCTGAT
CCGGTCCGACGTCAAGCAGATCCAGTGGCATCAATGGTTCGCCGCCAACGGCCTCGAAGCGCCGGCGCTGCACGGCATGC
GCTTCGACCGCAGCTTCCTGGCGCTGGCGACAGCAGCCGAGGGTCTCGGCGTTGCCCTGGAGTCGACGTTGCTGGCCGAG
CGCGAGCTGGCGTCGGGACGGTTGGTCGCGCCGCTCGCGGGCCGCTCCAATGATATCCGCTATGTCGGCCACAGGCTGGT
CGTTCCACGCACGCAGCATCAGCGCTCGGCGGTGCGTGCCTTCGCCGACTGGATCAGGTCGGAGCTGTCAGACGCGTAG

Upstream 100 bases:

>100_bases
TCCCCAAAGTGTCGTTGTGTTGGGCTTAACCATGGCGGGCCGGACCGGCGGCGACAAACGCGCAGTTGTCATGGATAGAT
GAATCTGGTTCACTTATGGA

Downstream 100 bases:

>100_bases
CTCGGTGCGAAGCTCCGGTCAGAACCGCGCGGCGATCTCCACGAGCCGACGATGCGCGCGCTCGCGCGCCGCGCCGGTGT
GCGCGGCCGGCCCGCTGGTC

Product: peroxide resistance protein PerR

Products: NA

Alternate protein names: Peroxide resistance protein perR [H]

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MLSNIPISSIRAFEAAARTGSFRDAANELHLTPSAVSHAIRKLEATLRTVLFERTARAVHLTPAGENLMRHAGAAFDQLR
RGLEEVAARGPQLVRVHSAPSFAAQWLTPRLAQFLAAHPKLEVRLSANTDYARFKNDDFDIDIVYGQPHAEGVEIIPLAE
ETITPLCSPALAATIKRPADLLERTLIRSDVKQIQWHQWFAANGLEAPALHGMRFDRSFLALATAAEGLGVALESTLLAE
RELASGRLVAPLAGRSNDIRYVGHRLVVPRTQHQRSAVRAFADWIRSELSDA

Sequences:

>Translated_292_residues
MLSNIPISSIRAFEAAARTGSFRDAANELHLTPSAVSHAIRKLEATLRTVLFERTARAVHLTPAGENLMRHAGAAFDQLR
RGLEEVAARGPQLVRVHSAPSFAAQWLTPRLAQFLAAHPKLEVRLSANTDYARFKNDDFDIDIVYGQPHAEGVEIIPLAE
ETITPLCSPALAATIKRPADLLERTLIRSDVKQIQWHQWFAANGLEAPALHGMRFDRSFLALATAAEGLGVALESTLLAE
RELASGRLVAPLAGRSNDIRYVGHRLVVPRTQHQRSAVRAFADWIRSELSDA
>Mature_292_residues
MLSNIPISSIRAFEAAARTGSFRDAANELHLTPSAVSHAIRKLEATLRTVLFERTARAVHLTPAGENLMRHAGAAFDQLR
RGLEEVAARGPQLVRVHSAPSFAAQWLTPRLAQFLAAHPKLEVRLSANTDYARFKNDDFDIDIVYGQPHAEGVEIIPLAE
ETITPLCSPALAATIKRPADLLERTLIRSDVKQIQWHQWFAANGLEAPALHGMRFDRSFLALATAAEGLGVALESTLLAE
RELASGRLVAPLAGRSNDIRYVGHRLVVPRTQHQRSAVRAFADWIRSELSDA

Specific function: Apparent regulatory gene involved in peroxide resistance in stationary phase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786448, Length=290, Percent_Identity=53.1034482758621, Blast_Score=321, Evalue=3e-89,
Organism=Escherichia coli, GI1789173, Length=287, Percent_Identity=34.8432055749129, Blast_Score=144, Evalue=6e-36,
Organism=Escherichia coli, GI1788706, Length=299, Percent_Identity=30.1003344481605, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI1787128, Length=298, Percent_Identity=27.8523489932886, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI145693193, Length=296, Percent_Identity=27.3648648648649, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI157672245, Length=160, Percent_Identity=32.5, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787601, Length=178, Percent_Identity=29.7752808988764, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1789440, Length=304, Percent_Identity=26.3157894736842, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI145693105, Length=167, Percent_Identity=27.5449101796407, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1790262, Length=239, Percent_Identity=26.3598326359833, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI87081978, Length=261, Percent_Identity=27.9693486590038, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1787806, Length=238, Percent_Identity=25.2100840336134, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1787589, Length=304, Percent_Identity=23.6842105263158, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1786401, Length=295, Percent_Identity=23.3898305084746, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 32106; Mature: 32106

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSNIPISSIRAFEAAARTGSFRDAANELHLTPSAVSHAIRKLEATLRTVLFERTARAVH
CCCCCCHHHHHHHHHHHHCCCHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEE
LTPAGENLMRHAGAAFDQLRRGLEEVAARGPQLVRVHSAPSFAAQWLTPRLAQFLAAHPK
ECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCC
LEVRLSANTDYARFKNDDFDIDIVYGQPHAEGVEIIPLAEETITPLCSPALAATIKRPAD
EEEEEECCCCHHHCCCCCCEEEEEECCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHH
LLERTLIRSDVKQIQWHQWFAANGLEAPALHGMRFDRSFLALATAAEGLGVALESTLLAE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHCHHHHHHHHHHCCCCHHHHHHHHHH
RELASGRLVAPLAGRSNDIRYVGHRLVVPRTQHQRSAVRAFADWIRSELSDA
HHHCCCCEEEECCCCCCCCEEECCEEECCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSNIPISSIRAFEAAARTGSFRDAANELHLTPSAVSHAIRKLEATLRTVLFERTARAVH
CCCCCCHHHHHHHHHHHHCCCHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEE
LTPAGENLMRHAGAAFDQLRRGLEEVAARGPQLVRVHSAPSFAAQWLTPRLAQFLAAHPK
ECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCC
LEVRLSANTDYARFKNDDFDIDIVYGQPHAEGVEIIPLAEETITPLCSPALAATIKRPAD
EEEEEECCCCHHHCCCCCCEEEEEECCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHH
LLERTLIRSDVKQIQWHQWFAANGLEAPALHGMRFDRSFLALATAAEGLGVALESTLLAE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHCHHHHHHHHHHCCCCHHHHHHHHHH
RELASGRLVAPLAGRSNDIRYVGHRLVVPRTQHQRSAVRAFADWIRSELSDA
HHHCCCCEEEECCCCCCCCEEECCEEECCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]