| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146341651
Identifier: 146341651
GI number: 146341651
Start: 4947310
End: 4948983
Strand: Direct
Name: 146341651
Synonym: BRADO4755
Alternate gene names: NA
Gene position: 4947310-4948983 (Clockwise)
Preceding gene: 146341650
Following gene: 146341652
Centisome position: 66.35
GC content: 62.72
Gene sequence:
>1674_bases GTGTTCATAGATGGACGGCGAATCGCGGCAGGGACCACGCTGGACGCGGAGATCTGCATCATCGGCGGCGGTCCCGCAGG CATCGTGATCGCGCGCGAATTGCTGGCGACGTCGCGTTCGGTCATTCTGGTCGAGAGCGGCTCCTGGCGGCCAGATAAGC TGATCCAGGCGCTGAATGCCGCCGAGCTTGCCGCTGGCAGTCGTCATCCGCCCCCCGAGATGTACCGCGAAAGACGCTTC GGCGGATCATCGACGATCTGGGGTGGCCGCTGTGTCCCGCTGTCGCCCAGCGATTTCGAGCGCCGACCCTATGTCGCCAA TAGCGGGTGGCCGATCTCCTACGACGAGCTCGCCCCGTTTTATGCAAGGGCCCTGACTTATTGCGAGGCCGGCGAGTTCG TATTCGATCCGGTTTGTCTCAAAGGTCCAGCCGATCTTGTCGAGGGACTCGAGGACGATGATATTTCGGTCGGTCTGGAG CGCTTCAGTCCGCCCACCAATTTCGGGCGCCGCTTCAAGGCTGATCTCGTCCGCTCGTCGCTGCACCGGATCCTGACCCA GACCACCGTCACGCGATTACAGACGGACAGTTCCGGTCGGCGGATCGCCGCGCTGGACTGTGCGACCGTTGCCGGCAATT CTTTCCGCATTCACGCGAAGACCATCGTCCTCGCAGCCGGCGGACTCGAGTCAGTGCGCCTTCTGGCGGCCTCCAACCAG GTGAATCCCGCGGGCCTCGCCAATTCGAGCGGCGCTCTCGGCCGCTACTACATGTCGCACCTGGAGGGCACGCTCGGATG CCTGCAAGTCGCGAACGGCCGCCGGGTGGCGTGGAACTTCGCAAGAACATCCGATGGCATCTATGCGAAGCATCATTTGC GGTTGTCCGAGCCGGTGAAGAACCGTCATCAGCTGCGAAACATGATTTTCCGGCTGCATCACGCCAATCCGATGAACCCC GACCATCGCGATCCCGTGCTGTCGTTGATGTACATCGCGAAGCGCTTCGTGCTTCCGGAATACCGGCGAAAGATCACCAC CGTGGAGCTGGAGGCGCTCGATCGCCTGCCTCACGGAAGCACCCTCGCCGTTCGGCATGTCGCCAACATCGCCGGCAATC CGTGGCCGCTCGCGAAGTTTCTGGGCTCCTGGGTCTACAGGCGGCATGCGCGCTATCGGCGCGTCCCCTATGTGGCGCTC CACTCGAAAACCGGCTGCTACCCGCTCGACTACAATGCCGAGCAGACGCCGCTTTATGACAGCAGGCTCTCGCTGACAGG CGAGACAGATCGGTTCGGAATGCCAAAGCTGCACATCGATTGGCGGGTCTGTCCAGGGGACATGGCCTCGATTGCGGCCA GCTATCGCGAGTTACAACGGGTGTTGGACCGGACCGGCGTCGCCAAAGTGCTGTTCGACGACGCCACCCTCAACGAGAGT GCCAGCCATCCGACCGCCGTGGGCGGCCATCATATCGGCACGGCACGGATGAGCGATGATCCGAGCCAGGGCGTCGTGAA TTCGAACTGTCGAGCCCATGACGTCGATAATCTCTACATCGCCAGCAGCGCCGTGTTCCCAACCGGCGGCTCGGCGAATC CCACACTGACGATCGTCGCTCTCGCCATTCGACTGGCCGAGCACATGGCGTCCGAGATGCGGAGTTCCAGATGA
Upstream 100 bases:
>100_bases CGGCCCTGGCGCGGAGCGAGCTCGGCCGTCTGCTGATCGGCACAACCCGTGTGGCGCATCTACTCCAAGTGCTCGATGCC ATTCAAGATCAGGATGAACC
Downstream 100 bases:
>100_bases CGCCATCGATTCTCTGGCTGGCGCGAACGCTGCCGCTGCCGCTGAACGCCGGTGACCGGATCTACTCGGCGCACCTCGCC GGCGCGGTCGCGCGCCAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: GMC Oxidoreductase; FAD Dependent Oxidoreductase; Oxidoreductase; Choline Dehydrogenase; 2-Keto-Gluconate Dehydrogenase; Dehydrogenase; GMC Family Oxidoreductase; GMC Oxidoreductase Family; Flavoprotein Related Choline Dehydrogenase; Choline Dehydrogenase-Like Flavoprotein; Gluconate 2-Dehydrogenase; Glucose Dehydrogenase; NAD-Dependent Epimerase/Dehydratase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Dehydrogenase Subunit-Like Protein; Gluconate 2-Dehydrogenase Flavoprotein; Glucose-Methanol-Choline Family Oxidoreductase; Glucose Dehydrogenase Subunit Alpha; Oxidoreductase-Like Protein; Choline Dehydrogenase And Flavoproteins-Like Protein; Oxidoreductase GMC Family; FAD-Dependent Oxidoreductase; Dehydrogenase Subunit I; Dehydrogenase Protein; Gluconate Dehydrogenase; Capsular Polysaccharide Biosynthesis Oxidoreductase; Gluconate 2-Dehydrogenase Alpha Chain
Number of amino acids: Translated: 557; Mature: 557
Protein sequence:
>557_residues MFIDGRRIAAGTTLDAEICIIGGGPAGIVIARELLATSRSVILVESGSWRPDKLIQALNAAELAAGSRHPPPEMYRERRF GGSSTIWGGRCVPLSPSDFERRPYVANSGWPISYDELAPFYARALTYCEAGEFVFDPVCLKGPADLVEGLEDDDISVGLE RFSPPTNFGRRFKADLVRSSLHRILTQTTVTRLQTDSSGRRIAALDCATVAGNSFRIHAKTIVLAAGGLESVRLLAASNQ VNPAGLANSSGALGRYYMSHLEGTLGCLQVANGRRVAWNFARTSDGIYAKHHLRLSEPVKNRHQLRNMIFRLHHANPMNP DHRDPVLSLMYIAKRFVLPEYRRKITTVELEALDRLPHGSTLAVRHVANIAGNPWPLAKFLGSWVYRRHARYRRVPYVAL HSKTGCYPLDYNAEQTPLYDSRLSLTGETDRFGMPKLHIDWRVCPGDMASIAASYRELQRVLDRTGVAKVLFDDATLNES ASHPTAVGGHHIGTARMSDDPSQGVVNSNCRAHDVDNLYIASSAVFPTGGSANPTLTIVALAIRLAEHMASEMRSSR
Sequences:
>Translated_557_residues MFIDGRRIAAGTTLDAEICIIGGGPAGIVIARELLATSRSVILVESGSWRPDKLIQALNAAELAAGSRHPPPEMYRERRF GGSSTIWGGRCVPLSPSDFERRPYVANSGWPISYDELAPFYARALTYCEAGEFVFDPVCLKGPADLVEGLEDDDISVGLE RFSPPTNFGRRFKADLVRSSLHRILTQTTVTRLQTDSSGRRIAALDCATVAGNSFRIHAKTIVLAAGGLESVRLLAASNQ VNPAGLANSSGALGRYYMSHLEGTLGCLQVANGRRVAWNFARTSDGIYAKHHLRLSEPVKNRHQLRNMIFRLHHANPMNP DHRDPVLSLMYIAKRFVLPEYRRKITTVELEALDRLPHGSTLAVRHVANIAGNPWPLAKFLGSWVYRRHARYRRVPYVAL HSKTGCYPLDYNAEQTPLYDSRLSLTGETDRFGMPKLHIDWRVCPGDMASIAASYRELQRVLDRTGVAKVLFDDATLNES ASHPTAVGGHHIGTARMSDDPSQGVVNSNCRAHDVDNLYIASSAVFPTGGSANPTLTIVALAIRLAEHMASEMRSSR >Mature_557_residues MFIDGRRIAAGTTLDAEICIIGGGPAGIVIARELLATSRSVILVESGSWRPDKLIQALNAAELAAGSRHPPPEMYRERRF GGSSTIWGGRCVPLSPSDFERRPYVANSGWPISYDELAPFYARALTYCEAGEFVFDPVCLKGPADLVEGLEDDDISVGLE RFSPPTNFGRRFKADLVRSSLHRILTQTTVTRLQTDSSGRRIAALDCATVAGNSFRIHAKTIVLAAGGLESVRLLAASNQ VNPAGLANSSGALGRYYMSHLEGTLGCLQVANGRRVAWNFARTSDGIYAKHHLRLSEPVKNRHQLRNMIFRLHHANPMNP DHRDPVLSLMYIAKRFVLPEYRRKITTVELEALDRLPHGSTLAVRHVANIAGNPWPLAKFLGSWVYRRHARYRRVPYVAL HSKTGCYPLDYNAEQTPLYDSRLSLTGETDRFGMPKLHIDWRVCPGDMASIAASYRELQRVLDRTGVAKVLFDDATLNES ASHPTAVGGHHIGTARMSDDPSQGVVNSNCRAHDVDNLYIASSAVFPTGGSANPTLTIVALAIRLAEHMASEMRSSR
Specific function: Unknown
COG id: COG2303
COG function: function code E; Choline dehydrogenase and related flavoproteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61243; Mature: 61243
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIDGRRIAAGTTLDAEICIIGGGPAGIVIARELLATSRSVILVESGSWRPDKLIQALNA CCCCCCEEECCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHH AELAAGSRHPPPEMYRERRFGGSSTIWGGRCVPLSPSDFERRPYVANSGWPISYDELAPF HHHHCCCCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCEECCCCCCCCHHHHHHH YARALTYCEAGEFVFDPVCLKGPADLVEGLEDDDISVGLERFSPPTNFGRRFKADLVRSS HHHHHHHHCCCCEEECCEECCCCHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH LHRILTQTTVTRLQTDSSGRRIAALDCATVAGNSFRIHAKTIVLAAGGLESVRLLAASNQ HHHHHHHHHHHHHEECCCCCEEEEEEEHEECCCCEEEEEEEEEEEECCHHHEEEEEECCC VNPAGLANSSGALGRYYMSHLEGTLGCLQVANGRRVAWNFARTSDGIYAKHHLRLSEPVK CCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCEEEEEEEECCCCEEEEEEEECCHHHH NRHQLRNMIFRLHHANPMNPDHRDPVLSLMYIAKRFVLPEYRRKITTVELEALDRLPHGS HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHEEEEEHHHHHCCCCCC TLAVRHVANIAGNPWPLAKFLGSWVYRRHARYRRVPYVALHSKTGCYPLDYNAEQTPLYD HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEECCCCCCCCCCCC SRLSLTGETDRFGMPKLHIDWRVCPGDMASIAASYRELQRVLDRTGVAKVLFDDATLNES CEEEECCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC ASHPTAVGGHHIGTARMSDDPSQGVVNSNCRAHDVDNLYIASSAVFPTGGSANPTLTIVA CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEECEECCCCCCCCCHHHHHH LAIRLAEHMASEMRSSR HHHHHHHHHHHHHHHCC >Mature Secondary Structure MFIDGRRIAAGTTLDAEICIIGGGPAGIVIARELLATSRSVILVESGSWRPDKLIQALNA CCCCCCEEECCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHH AELAAGSRHPPPEMYRERRFGGSSTIWGGRCVPLSPSDFERRPYVANSGWPISYDELAPF HHHHCCCCCCCHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCEECCCCCCCCHHHHHHH YARALTYCEAGEFVFDPVCLKGPADLVEGLEDDDISVGLERFSPPTNFGRRFKADLVRSS HHHHHHHHCCCCEEECCEECCCCHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH LHRILTQTTVTRLQTDSSGRRIAALDCATVAGNSFRIHAKTIVLAAGGLESVRLLAASNQ HHHHHHHHHHHHHEECCCCCEEEEEEEHEECCCCEEEEEEEEEEEECCHHHEEEEEECCC VNPAGLANSSGALGRYYMSHLEGTLGCLQVANGRRVAWNFARTSDGIYAKHHLRLSEPVK CCCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCEEEEEEEECCCCEEEEEEEECCHHHH NRHQLRNMIFRLHHANPMNPDHRDPVLSLMYIAKRFVLPEYRRKITTVELEALDRLPHGS HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHEEEEEHHHHHCCCCCC TLAVRHVANIAGNPWPLAKFLGSWVYRRHARYRRVPYVALHSKTGCYPLDYNAEQTPLYD HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEECCCCCCCCCCCC SRLSLTGETDRFGMPKLHIDWRVCPGDMASIAASYRELQRVLDRTGVAKVLFDDATLNES CEEEECCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCC ASHPTAVGGHHIGTARMSDDPSQGVVNSNCRAHDVDNLYIASSAVFPTGGSANPTLTIVA CCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEEEECEECCCCCCCCCHHHHHH LAIRLAEHMASEMRSSR HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA