| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is pleC [H]
Identifier: 146341638
GI number: 146341638
Start: 4934146
End: 4935744
Strand: Direct
Name: pleC [H]
Synonym: BRADO4741
Alternate gene names: 146341638
Gene position: 4934146-4935744 (Clockwise)
Preceding gene: 146341637
Following gene: 146341639
Centisome position: 66.17
GC content: 66.6
Gene sequence:
>1599_bases ATGAGTAAACCCGCGGAAAAGCCCGAGATCGTCGAGCTTCCGGCCGATGCGCCGGCGCTCGCGCCGGTCAGCCAGCGCCG GGCGGCGCAGCAGCGGGTGCGCGAGGCGCGCGACCGGTTAACGTCGACATCGGGAACGCGGCCGGCCTTCGACCGCGAGC TGCTGCGCCAATATGCGCAGACCCGCATCTCCGCCTCCTACATCGTGATGCTGCTGGTCGTCGCGACCGGCATGATGCTG AGCGTCTGGCTGCACGCGGTCGCCGCGGGCGCCTGGACGCTCGGCGTGCTCTGCATCCACGCCGCGATCGTGCGCAACTG CTCGAACTTCCTGGCCGACCAGCCATCGCTGGCGGCGACGCGGCGCTGGCGGACCCGCTTCGTGCTGCTCGACCTGCTCT ACGGCGTGTGCTGGATGGCGATCCTGATCCACCCCGCGCTGGCGGAGGTGTCGGGCACGCTGATGATGTTCCTGATGCTG CTGGTCATCGCCGTGTCCAGCATGCTCGCAGCGAACCTGCCAGTGGCAGCCGTCGCGGTGACCGCGCCGGTGACGGTCGC GATCACGCTGAGCCTCGCGCTGTCGGGCACGTTCGACAATTATCTGCTTGCCGGATTTGCCGTCGCGGCCGAAGGCTATT TCGTGCTGCTCGCGCATCAGCTGCATTCGACCACGCTGGCCACGCTCGAGGCGCGCGCCGAGAAGGATGCGCTGATCGGC GAGCTCGAGCAGGCCAAGGCGATCTCCGACGAGGCACGCTACCGCGCCGAAGCGGCCAATGTCGCCAAATCGCGCTTCCT CGCCCAGATGAGCCACGAGCTGCGCACGCCGCTGAACGCCATTCTCGGCTTCTCCGAGGTGATGAAGAGCGAGATCTTCG GCGCCCATGCGGTGCCGGTCTACAAGGAATACTCGGCCGACATCCACAATTCCGGCGTCCACCTGCTCAATTTGATCAAC GAGATCCTCGACCTCTCGCGCATCGAGGCCGGCCGCTACGAGCTTAACGAGGAAGCGGTGGCGCTGGTGCATGTGATCGC GGACTGCCATCATCTGCTCAAGCTGCGCGCCTCGAGCCGCGGCATCACCATCCACGAGGTGTTCGAGCAGAAAATGCCGC GTCTGTGGGCCGACGAGCGCGCGATCCGCCAGGTCGTGCTGAACCTGCTGTCCAACGCCATCAAGTTCACGCCGCAGGGC GGCGAGATCTGGCTGAAGGCGGGCTGGACGGCGTCCGGCGGGCAATATCTCAGCGTCAAGGACACCGGCTCCGGCATCCC GGAGAACGAGATCCCGATCGTGCTCGCCTCGTTCGGCCAGGGCTCGAATTCGATCAAGTCAGCCGAACAAGGCGCGGGCC TGGGGCTTCCGATCGCCAAGAACCTGATCGAGATGCATGGCGGCACGTTCACGCTGAAATCGAAGGTCCGCATCGGCACC GAGGTGATCGTCACCTTCCCGCCCGAGCGCGTGATGTCGGCGCTGGCGCCGCTGTCCGACGAGGCGCCGCCGCTGCAACC GGATCCTGCCACCGCGCCCGCTCAGGAGAAGCGGCGGCTGCTGCGCAAACCGATCATGAATGCCGGAACGGGACTGTGA
Upstream 100 bases:
>100_bases CAAATTTTTCGTTGTCTATAATCCGTCTTAAGGATTTGGAGCCAGTTATAGACGATGCAGAAAGCAGCCCGTGCGGCCCC GGGCAGGATTTGTGTTGTTG
Downstream 100 bases:
>100_bases GATGATTGACCTTGCAAAGCCGGACCAGAACCTTTTCAACTCGCGGCATGAGCCAGGATTCCCCCTGCATTGCCGTCTGC TTGATCGACCCCAAGACGAA
Product: putative sensor histidine kinase membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 532; Mature: 531
Protein sequence:
>532_residues MSKPAEKPEIVELPADAPALAPVSQRRAAQQRVREARDRLTSTSGTRPAFDRELLRQYAQTRISASYIVMLLVVATGMML SVWLHAVAAGAWTLGVLCIHAAIVRNCSNFLADQPSLAATRRWRTRFVLLDLLYGVCWMAILIHPALAEVSGTLMMFLML LVIAVSSMLAANLPVAAVAVTAPVTVAITLSLALSGTFDNYLLAGFAVAAEGYFVLLAHQLHSTTLATLEARAEKDALIG ELEQAKAISDEARYRAEAANVAKSRFLAQMSHELRTPLNAILGFSEVMKSEIFGAHAVPVYKEYSADIHNSGVHLLNLIN EILDLSRIEAGRYELNEEAVALVHVIADCHHLLKLRASSRGITIHEVFEQKMPRLWADERAIRQVVLNLLSNAIKFTPQG GEIWLKAGWTASGGQYLSVKDTGSGIPENEIPIVLASFGQGSNSIKSAEQGAGLGLPIAKNLIEMHGGTFTLKSKVRIGT EVIVTFPPERVMSALAPLSDEAPPLQPDPATAPAQEKRRLLRKPIMNAGTGL
Sequences:
>Translated_532_residues MSKPAEKPEIVELPADAPALAPVSQRRAAQQRVREARDRLTSTSGTRPAFDRELLRQYAQTRISASYIVMLLVVATGMML SVWLHAVAAGAWTLGVLCIHAAIVRNCSNFLADQPSLAATRRWRTRFVLLDLLYGVCWMAILIHPALAEVSGTLMMFLML LVIAVSSMLAANLPVAAVAVTAPVTVAITLSLALSGTFDNYLLAGFAVAAEGYFVLLAHQLHSTTLATLEARAEKDALIG ELEQAKAISDEARYRAEAANVAKSRFLAQMSHELRTPLNAILGFSEVMKSEIFGAHAVPVYKEYSADIHNSGVHLLNLIN EILDLSRIEAGRYELNEEAVALVHVIADCHHLLKLRASSRGITIHEVFEQKMPRLWADERAIRQVVLNLLSNAIKFTPQG GEIWLKAGWTASGGQYLSVKDTGSGIPENEIPIVLASFGQGSNSIKSAEQGAGLGLPIAKNLIEMHGGTFTLKSKVRIGT EVIVTFPPERVMSALAPLSDEAPPLQPDPATAPAQEKRRLLRKPIMNAGTGL >Mature_531_residues SKPAEKPEIVELPADAPALAPVSQRRAAQQRVREARDRLTSTSGTRPAFDRELLRQYAQTRISASYIVMLLVVATGMMLS VWLHAVAAGAWTLGVLCIHAAIVRNCSNFLADQPSLAATRRWRTRFVLLDLLYGVCWMAILIHPALAEVSGTLMMFLMLL VIAVSSMLAANLPVAAVAVTAPVTVAITLSLALSGTFDNYLLAGFAVAAEGYFVLLAHQLHSTTLATLEARAEKDALIGE LEQAKAISDEARYRAEAANVAKSRFLAQMSHELRTPLNAILGFSEVMKSEIFGAHAVPVYKEYSADIHNSGVHLLNLINE ILDLSRIEAGRYELNEEAVALVHVIADCHHLLKLRASSRGITIHEVFEQKMPRLWADERAIRQVVLNLLSNAIKFTPQGG EIWLKAGWTASGGQYLSVKDTGSGIPENEIPIVLASFGQGSNSIKSAEQGAGLGLPIAKNLIEMHGGTFTLKSKVRIGTE VIVTFPPERVMSALAPLSDEAPPLQPDPATAPAQEKRRLLRKPIMNAGTGL
Specific function: Member of the two-component regulatory system involved in the regulation of polar organelle development. PleC functions as a membrane-associated protein kinase that transfers phosphate to the response regulator pleD, leading to its activation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI48994928, Length=248, Percent_Identity=31.0483870967742, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI1789149, Length=236, Percent_Identity=33.0508474576271, Blast_Score=121, Evalue=1e-28, Organism=Escherichia coli, GI1788713, Length=259, Percent_Identity=34.3629343629344, Blast_Score=115, Evalue=9e-27, Organism=Escherichia coli, GI87081816, Length=269, Percent_Identity=34.9442379182156, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI145693157, Length=271, Percent_Identity=31.7343173431734, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1786912, Length=243, Percent_Identity=28.3950617283951, Blast_Score=100, Evalue=4e-22, Organism=Escherichia coli, GI87082128, Length=213, Percent_Identity=31.4553990610329, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1786783, Length=339, Percent_Identity=24.188790560472, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1786600, Length=236, Percent_Identity=27.5423728813559, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1790436, Length=249, Percent_Identity=26.9076305220884, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1788393, Length=234, Percent_Identity=24.7863247863248, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1788279, Length=208, Percent_Identity=26.4423076923077, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI1790300, Length=232, Percent_Identity=27.1551724137931, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1788549, Length=236, Percent_Identity=22.0338983050847, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1790861, Length=238, Percent_Identity=26.4705882352941, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 57616; Mature: 57484
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: PS50109 HIS_KIN ; PS00300 SRP54
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPAEKPEIVELPADAPALAPVSQRRAAQQRVREARDRLTSTSGTRPAFDRELLRQYAQ CCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH TRISASYIVMLLVVATGMMLSVWLHAVAAGAWTLGVLCIHAAIVRNCSNFLADQPSLAAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RRWRTRFVLLDLLYGVCWMAILIHPALAEVSGTLMMFLMLLVIAVSSMLAANLPVAAVAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH TAPVTVAITLSLALSGTFDNYLLAGFAVAAEGYFVLLAHQLHSTTLATLEARAEKDALIG HCCHHEEEEEHHHHCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH ELEQAKAISDEARYRAEAANVAKSRFLAQMSHELRTPLNAILGFSEVMKSEIFGAHAVPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH YKEYSADIHNSGVHLLNLINEILDLSRIEAGRYELNEEAVALVHVIADCHHLLKLRASSR HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCC GITIHEVFEQKMPRLWADERAIRQVVLNLLSNAIKFTPQGGEIWLKAGWTASGGQYLSVK CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCEEEEE DTGSGIPENEIPIVLASFGQGSNSIKSAEQGAGLGLPIAKNLIEMHGGTFTLKSKVRIGT CCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCEEECC EVIVTFPPERVMSALAPLSDEAPPLQPDPATAPAQEKRRLLRKPIMNAGTGL EEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SKPAEKPEIVELPADAPALAPVSQRRAAQQRVREARDRLTSTSGTRPAFDRELLRQYAQ CCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH TRISASYIVMLLVVATGMMLSVWLHAVAAGAWTLGVLCIHAAIVRNCSNFLADQPSLAAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RRWRTRFVLLDLLYGVCWMAILIHPALAEVSGTLMMFLMLLVIAVSSMLAANLPVAAVAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH TAPVTVAITLSLALSGTFDNYLLAGFAVAAEGYFVLLAHQLHSTTLATLEARAEKDALIG HCCHHEEEEEHHHHCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH ELEQAKAISDEARYRAEAANVAKSRFLAQMSHELRTPLNAILGFSEVMKSEIFGAHAVPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH YKEYSADIHNSGVHLLNLINEILDLSRIEAGRYELNEEAVALVHVIADCHHLLKLRASSR HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCC GITIHEVFEQKMPRLWADERAIRQVVLNLLSNAIKFTPQGGEIWLKAGWTASGGQYLSVK CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCCCCCCCEEEEE DTGSGIPENEIPIVLASFGQGSNSIKSAEQGAGLGLPIAKNLIEMHGGTFTLKSKVRIGT CCCCCCCCCCCCEEEEECCCCCCHHHHHHCCCCCCCHHHHHHHHHCCCEEEEECCEEECC EVIVTFPPERVMSALAPLSDEAPPLQPDPATAPAQEKRRLLRKPIMNAGTGL EEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8421698; 11259647 [H]